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PDB: 67 results

4WA8
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BU of 4wa8 by Molmil
Methanopyrus Kandleri FEN-1 nuclease
Descriptor: CHLORIDE ION, Flap endonuclease 1
Authors:Shah, S, Dunten, P, Horton, N.C.
Deposit date:2014-08-28
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and specificity of FEN-1 from Methanopyrus kandleri.
Proteins, 83, 2015
1GBN
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BU of 1gbn by Molmil
HUMAN ORNITHINE AMINOTRANSFERASE COMPLEXED WITH THE NEUROTOXIN GABACULINE
Descriptor: 3-AMINOBENZOIC ACID, GABACULINE, ORNITHINE AMINOTRANSFERASE, ...
Authors:Shah, S.A, Shen, B.W, Brunger, A.T.
Deposit date:1997-05-29
Release date:1998-06-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human ornithine aminotransferase complexed with L-canaline and gabaculine: structural basis for substrate recognition.
Structure, 5, 1997
2CAN
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BU of 2can by Molmil
HUMAN ORNITHINE AMINOTRANSFERASE COMPLEXED WITH L-CANALINE
Descriptor: CANALINE, ORNITHINE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Shah, S.A, Shen, B.W, Brunger, A.T.
Deposit date:1997-05-29
Release date:1998-06-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human ornithine aminotransferase complexed with L-canaline and gabaculine: structural basis for substrate recognition.
Structure, 5, 1997
406D
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BU of 406d by Molmil
5'-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(BRO) UP*CP*GP*GP*UP*G)-3'
Descriptor: RNA (5'-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(5BU)P*CP*GP*GP*UP*G)-3')
Authors:Shah, S.A, Brunger, A.T.
Deposit date:1998-06-22
Release date:1999-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The 1.8 A crystal structure of a statically disordered 17 base-pair RNA duplex: principles of RNA crystal packing and its effect on nucleic acid structure.
J.Mol.Biol., 285, 1999
4ZXP
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BU of 4zxp by Molmil
Crystal structure of Peptidyl- tRNA Hydrolase from Vibrio cholerae
Descriptor: CITRATE ANION, Peptidyl-tRNA hydrolase
Authors:Shahid, S, Pal, R.K, Kabra, A, Yadav, R, Kumar, A, Arora, A.
Deposit date:2015-05-20
Release date:2016-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5IKE
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BU of 5ike by Molmil
Crystal structure of mutant-D97N of peptidyl-tRNA hydrolase from Vibrio cholerae
Descriptor: Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2016-03-03
Release date:2017-03-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5IMB
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BU of 5imb by Molmil
Crystal structure of peptidyl-tRNA hydrolase mutant-N14D from Vibrio cholerae
Descriptor: Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2016-03-06
Release date:2017-03-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
4Z86
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BU of 4z86 by Molmil
Crystal structure of Peptidyl-tRNA hydrolase mutant -N118D from Vibrio cholerae at 1.63A resolution.
Descriptor: Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2015-04-08
Release date:2016-06-08
Last modified:2017-04-05
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5IVP
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BU of 5ivp by Molmil
Crystal structure of the Peptidyl-tRNA hydrolase from Vibrio cholerae in the C121 space group at pH 6.5
Descriptor: CITRATE ANION, Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2016-03-21
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of the Peptidyl-tRNA hydrolase from Vibrio cholerae in the C121 space group at pH 6.5
To Be Published
6X9X
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BU of 6x9x by Molmil
Crystal structure of Fab fragment of Anti-HCV E2 antibody (HC84.26)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, HC84.26 Fab Heavy Chain, ...
Authors:Shahid, S, Mariuzza, R.A.
Deposit date:2020-06-03
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Bivalent Antibody Fab Fragment.
J.Mol.Biol., 433, 2020
5B6J
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BU of 5b6j by Molmil
Crystal structure of Peptidyl-tRNA hydrolase mutant -H24N from Vibrio cholerae
Descriptor: Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2016-05-30
Release date:2017-04-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5ZK0
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BU of 5zk0 by Molmil
Crystal structure of Peptidyl-tRNA hydrolase mutant -M71A from Vibrio cholerae
Descriptor: Peptidyl-tRNA hydrolase, SODIUM ION
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2018-03-22
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Role of methionine 71 in substrate recognition and structural integrity of bacterial peptidyl-tRNA hydrolase.
Biochim. Biophys. Acta, 1866, 2018
5EKT
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BU of 5ekt by Molmil
Crystal structure of mutant-K146A of peptidyl-tRNA hydrolase from Vibrio cholerae at 1.63A resolution.
Descriptor: CITRATE ANION, Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabr, A, Pal, R.K, Arora, A.
Deposit date:2015-11-04
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of mutant-K146A of peptidyl-tRNA hydrolase from Vibrio cholerae at 1.63A resolution.
To be published
5GVZ
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BU of 5gvz by Molmil
Crystal structure of Peptidyl-tRNA hydrolase from Vibrio cholerae in space group C2221 at resolution 1.75A.
Descriptor: ACETATE ION, Peptidyl-tRNA hydrolase, SULFATE ION
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2016-09-07
Release date:2017-09-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Peptidyl-tRNA hydrolase from Vibrio cholerae in space group C2221 at resolution 1.75A.
To Be Published
8TFE
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BU of 8tfe by Molmil
Crystal structure of Fab fragment of anti-HCV E2 antibody (CBH-7)
Descriptor: 1,2-ETHANEDIOL, CBH-7 Heavy chain, CBH-7 Light chain, ...
Authors:Shahid, S, Mariuzza, R.A.
Deposit date:2023-07-10
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of Fab fragment of anti-HCV E2 antibody (CBH-7)
To Be Published
2LME
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BU of 2lme by Molmil
Solid-state NMR structure of the membrane anchor domain of the trimeric autotransporter YadA
Descriptor: Adhesin yadA
Authors:Shahid, S.A, Bardiaux, B, Franks, W.T, Habeck, M, Linke, D, van Rossum, B.
Deposit date:2011-11-30
Release date:2012-11-07
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Membrane-protein structure determination by solid-state NMR spectroscopy of microcrystals.
Nat.Methods, 9, 2012
4WIB
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BU of 4wib by Molmil
Crystal structure of Magnesium transporter MgtE
Descriptor: CALCIUM ION, Magnesium transporter MgtE
Authors:Takeda, H, Hattori, M, Nishizawa, T, Yamashita, K, Shah, S.T.A, Caffrey, M, Maturana, A.D, Ishitani, R, Nureki, O.
Deposit date:2014-09-25
Release date:2014-12-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE
Nat Commun, 5, 2014
1CE5
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BU of 1ce5 by Molmil
BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZAMIDINE
Descriptor: BENZAMIDINE, CALCIUM ION, CHLORIDE ION, ...
Authors:Ota, N, Stroupe, C, Ferreira-Da-Silva, J.M.S, Shah, S.S, Mares-Guia, M, Brunger, A.T.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Non-Boltzmann thermodynamic integration (NBTI) for macromolecular systems: relative free energy of binding of trypsin to benzamidine and benzylamine.
Proteins, 37, 1999
3OV6
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BU of 3ov6 by Molmil
CD1c in complex with MPM (mannosyl-beta1-phosphomycoketide)
Descriptor: 1-O-[(S)-hydroxy{[(4S,8S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-beta-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
Authors:Scharf, L, Li, N.S, Hawk, A.J, Garzon, D, Zhang, T, Kazen, A.R, Shah, S, Haddadian, E.J, Saghatelian, A, Faraldo-Gomez, J.D, Meredith, S.C, Piccirilli, J.A, Adams, E.J.
Deposit date:2010-09-15
Release date:2011-01-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:The 2.5 A structure of CD1c in complex with a mycobacterial lipid reveals an open groove ideally suited for diverse antigen presentation
Immunity, 33, 2010
2BZA
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BU of 2bza by Molmil
BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZYLAMINE
Descriptor: BENZYLAMINE, CALCIUM ION, CHLORIDE ION, ...
Authors:Ota, N, Stroupe, C, Ferreira-Da-Silva, J.M.S, Shah, S.S, Mares-Guia, M, Brunger, A.T.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Non-Boltzmann thermodynamic integration (NBTI) for macromolecular systems: relative free energy of binding of trypsin to benzamidine and benzylamine.
Proteins, 37, 1999
4U9L
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BU of 4u9l by Molmil
Structure of a membrane protein
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MAGNESIUM ION, Magnesium transporter MgtE
Authors:Takeda, H, Hattori, M, Nishizawa, T, Yamashita, K, Shah, S.T.A, Caffrey, M, Maturana, A.D, Ishitani, R, Nureki, O.
Deposit date:2014-08-06
Release date:2014-12-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE
Nat Commun, 5, 2014
4U9N
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BU of 4u9n by Molmil
Structure of a membrane protein
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MANGANESE (II) ION, Magnesium transporter MgtE, ...
Authors:Takeda, H, Hattori, M, Nishizawa, T, Yamashita, K, Shah, S.T.A, Caffrey, M, Maturana, A.D, Ishitani, R, Nureki, O.
Deposit date:2014-08-06
Release date:2014-12-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE
Nat Commun, 5, 2014
3L24
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BU of 3l24 by Molmil
Crystal Structure of the Nerve Agent Degrading Organophosphate Anhydrolase/Prolidase in Complex with Inhibitors
Descriptor: GLYCOLIC ACID, MANGANESE (II) ION, Xaa-Pro dipeptidase
Authors:Vyas, N.K, Nichitenko, A, Rastogi, V.K, Shah, S.S, Quiocho, F.A.
Deposit date:2009-12-14
Release date:2010-01-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the dual activities of the nerve agent degrading organophosphate anhydrolase/prolidase.
Biochemistry, 49, 2010
3SN6
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BU of 3sn6 by Molmil
Crystal structure of the beta2 adrenergic receptor-Gs protein complex
Descriptor: 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Camelid antibody VHH fragment, Endolysin,Beta-2 adrenergic receptor, ...
Authors:Rasmussen, S.G.F, DeVree, B.T, Zou, Y, Kruse, A.C, Chung, K.Y, Kobilka, T.S, Thian, F.S, Chae, P.S, Pardon, E, Calinski, D, Mathiesen, J.M, Shah, S.T.A, Lyons, J.A, Caffrey, M, Gellman, S.H, Steyaert, J, Skiniotis, G, Weis, W.I, Sunahara, R.K, Kobilka, B.K.
Deposit date:2011-06-28
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the beta2 adrenergic receptor-Gs protein complex
Nature, 477, 2011
1QCU
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BU of 1qcu by Molmil
CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX
Descriptor: 5'-R(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3', 5'-R(P*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3', AMMONIUM ION
Authors:Klosterman, P.S, Shah, S.A, Steitz, T.A.
Deposit date:1999-05-14
Release date:1999-11-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structures of two plasmid copy control related RNA duplexes: An 18 base pair duplex at 1.20 A resolution and a 19 base pair duplex at 1.55 A resolution.
Biochemistry, 38, 1999

 

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數據於2024-07-17公開中

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