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PDB: 84 results

3KUN
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BU of 3kun by Molmil
X-ray structure of the metcyano form of dehaloperoxidase from amphitrite ornata: evidence for photoreductive lysis of iron-cyanide bond
Descriptor: CYANIDE ION, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Serrano, V.S, Chen, Z, Gaff, J.F, Rose, R, Franzen, S.
Deposit date:2009-11-27
Release date:2010-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:X-ray structure of the metcyano form of dehaloperoxidase from Amphitrite ornata: evidence for photoreductive dissociation of the iron-cyanide bond.
Acta Crystallogr.,Sect.D, 66, 2010
3KUO
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BU of 3kuo by Molmil
X-ray structure of the metcyano form of dehaloperoxidase from amphitrite ornata: evidence for photoreductive lysis of iron-cyanide bond
Descriptor: CYANIDE ION, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Serrano, V.S, Chen, Z, Gaff, J.F, Rose, R, Franzen, S.
Deposit date:2009-11-27
Release date:2010-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:X-ray structure of the metcyano form of dehaloperoxidase from Amphitrite ornata: evidence for photoreductive dissociation of the iron-cyanide bond.
Acta Crystallogr.,Sect.D, 66, 2010
6OO8
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BU of 6oo8 by Molmil
Dehaloperoxidase B in complex with substrate pentachlorophenol
Descriptor: 1,2-ETHANEDIOL, Dehaloperoxidase B, PENTACHLOROPHENOL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2019-04-22
Release date:2020-04-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants.
Arch.Biochem.Biophys., 673, 2019
3LB3
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BU of 3lb3 by Molmil
Two-site competitive inhibition in dehaloperoxidase-hemoglobin
Descriptor: 4-chlorophenol, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, Franzen, S, Thompson, M.K, Davis, M.F, Nicoletti, F.P, Howes, B.D, Smulevich, G.
Deposit date:2010-01-07
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function.
Biophys.J., 99, 2010
7M1K
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BU of 7m1k by Molmil
Crystal structure of dehaloperoxidase B in complex with 2,6-difluorophenol
Descriptor: 2,6-DIFLUOROPHENOL, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2021-03-13
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Bridging the functional gap between reactivity and inhibition in dehaloperoxidase B from Amphitrite ornata: Mechanistic and structural studies with 2,4- and 2,6-dihalophenols.
J.Inorg.Biochem., 236, 2022
7M1J
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BU of 7m1j by Molmil
Crystal structure of dehaloperoxidase B in complex with 2,6-dibromophenol
Descriptor: 2,6-bis(bromanyl)phenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2021-03-13
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.554 Å)
Cite:Bridging the functional gap between reactivity and inhibition in dehaloperoxidase B from Amphitrite ornata: Mechanistic and structural studies with 2,4- and 2,6-dihalophenols.
J.Inorg.Biochem., 236, 2022
7M1I
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BU of 7m1i by Molmil
Crystal structure of dehaloperoxidase B in complex with 2,6-dichlorophenol
Descriptor: 2,6-dichlorophenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2021-03-13
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Bridging the functional gap between reactivity and inhibition in dehaloperoxidase B from Amphitrite ornata: Mechanistic and structural studies with 2,4- and 2,6-dihalophenols.
J.Inorg.Biochem., 236, 2022
6MRJ
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BU of 6mrj by Molmil
Crystal structure of H.pylori NikR in complex with DNA
Descriptor: DNA (36-MER), MAGNESIUM ION, NICKEL (II) ION, ...
Authors:Pozharski, E, de Serrano, V.
Deposit date:2018-10-13
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of H.pylori NikR in complex with DNA
To Be Published
6CH6
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BU of 6ch6 by Molmil
Dehaloperoxidase B in complex with substrate 2,4-dimethoxyphenol
Descriptor: 2,4-dimethoxyphenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:de Serrano, V.S, Carey, L.M, Ghiladi, R.A.
Deposit date:2018-02-22
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
6CH5
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BU of 6ch5 by Molmil
Dehaloperoxidase B in complex with substrate 4-Nitroguaiacol
Descriptor: 2-methoxy-4-nitrophenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase B, ...
Authors:de Serrano, V.S, Carey, L.M, Ghiladi, R.A.
Deposit date:2018-02-21
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
3DR9
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BU of 3dr9 by Molmil
Increased Distal Histidine Conformational Flexibility in the Deoxy Form of Dehaloperoxidase from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Chen, X, de Serrano, V.S, Betts, L, Franzen, S.
Deposit date:2008-07-10
Release date:2009-01-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Distal histidine conformational flexibility in dehaloperoxidase from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 65, 2009
8DOI
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BU of 8doi by Molmil
Dehaloperoxidase B in complex with 2,2'-Biphenol
Descriptor: 2-(2-hydroxyphenyl)phenol, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:de Serrano, V.S, Yun, D, Ghiladi, R.
Deposit date:2022-07-13
Release date:2022-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase.
J.Inorg.Biochem., 238, 2023
4ILZ
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BU of 4ilz by Molmil
Structural and kinetic study of an internal substrate binding site of dehaloperoxidase-hemoglobin A from Amphitrite ornata
Descriptor: 2,4,6-TRIBROMOPHENOL, Dehaloperoxidase A, ISOPROPYL ALCOHOL, ...
Authors:de Serrano, V.S, Zhao, J, Zhao, J, Franzen, S.
Deposit date:2013-01-01
Release date:2013-03-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural and Kinetic Study of an Internal Substrate Binding Site in Dehaloperoxidase-Hemoglobin A from Amphitrite ornata.
Biochemistry, 52, 2013
4GUL
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BU of 4gul by Molmil
Study on structure and function relationships in human ferric Pirin
Descriptor: FE (III) ION, Pirin
Authors:Liu, F, Rehmani, I, Fu, R, Esaka, S, Chen, L, Serrano, V, Liu, A.
Deposit date:2012-08-29
Release date:2013-05-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HLT
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BU of 4hlt by Molmil
Crystal structure of ferric E32V Pirin
Descriptor: FE (II) ION, Pirin
Authors:Liu, F, Rehmani, I, Esaki, S, Fu, R, Chen, L, Serrano, V, Liu, A.
Deposit date:2012-10-17
Release date:2013-05-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
8DOH
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BU of 8doh by Molmil
Dehaloperoxidase B in complex with Bisphenol F
Descriptor: 4,4'-methylenediphenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:de Serrano, V.S, Yun, D, Ghiladi, R.
Deposit date:2022-07-13
Release date:2022-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase.
J.Inorg.Biochem., 238, 2023
8DOG
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BU of 8dog by Molmil
Dehaloperoxidase B in complex with Bisphenol E
Descriptor: 4-[1-(4-hydroxyphenyl)ethyl]phenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:de Serrano, V.S, Yun, D, Ghiladi, R.
Deposit date:2022-07-13
Release date:2022-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase.
J.Inorg.Biochem., 238, 2023
8DOJ
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BU of 8doj by Molmil
Dehaloperoxidase B in complex with 3,3'-Biphenol
Descriptor: (1P)-[1,1'-biphenyl]-3,3'-diol, Dehaloperoxidase B, GLYCEROL, ...
Authors:de Serrano, V.S, Yun, D, Ghiladi, R.
Deposit date:2022-07-13
Release date:2022-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase.
J.Inorg.Biochem., 238, 2023
8EJN
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BU of 8ejn by Molmil
Structure of dehaloperoxidase A in complex with 2,4-dichlorophenol
Descriptor: 2,4-dichlorophenol, DIMETHYL SULFOXIDE, Dehaloperoxidase A, ...
Authors:Aktar, M.S, de Serrano, V.S, Franzen, S.
Deposit date:2022-09-17
Release date:2023-08-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Comparative study of the binding and activation of 2,4-dichlorophenol by dehaloperoxidase A and B.
J.Inorg.Biochem., 247, 2023
3QM8
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BU of 3qm8 by Molmil
Blackfin tuna cyanomet-myoglobin, atomic resolution
Descriptor: 1,2-ETHANEDIOL, CYANIDE ION, Myoglobin, ...
Authors:de Serrano, V.S, Rodriguez, M.M, Schreiter, E.R.
Deposit date:2011-02-03
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:High Resolution Structures of Blackfin Tuna Myoglobin
To be Published
3QMA
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BU of 3qma by Molmil
Blackfin tuna myoglobin imidazole complex, atomic resolution
Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, Myoglobin, ...
Authors:de Serrano, V.S, Rodriguez, M.M, Schreiter, E.R.
Deposit date:2011-02-03
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:High Resolution Structures of Blackfin Tuna Myoglobin
To be Published
3IXF
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BU of 3ixf by Molmil
Crystal Structure of Dehaloperoxidase B at 1.58 and Structural Characterization of the AB Dimer from Amphitrite ornata
Descriptor: Dehaloperoxidase B, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, D'Antonio, J, Thompson, M.K, Franzen, S, Ghiladi, R.A.
Deposit date:2009-09-03
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structure of dehaloperoxidase B at 1.58 A resolution and structural characterization of the AB dimer from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 66, 2010
3LB4
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BU of 3lb4 by Molmil
Two-site competitive inhibition in dehaloperoxidase-hemoglobin
Descriptor: 4-FLUOROPHENOL, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, Franzen, S, Thompson, M.K, Davis, M.F, Nicoletti, F.P, Howes, B.D, Smulevich, G.
Deposit date:2010-01-07
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function.
Biophys.J., 99, 2010
3LB1
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BU of 3lb1 by Molmil
Two-site competitive inhibition in dehaloperoxidase-hemoglobin
Descriptor: 4-IODOPHENOL, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, Franzen, S, Thompson, M.K, Davis, M.F, Niccoletti, F.P, Howes, B.D, Smulevich, G.
Deposit date:2010-01-07
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function.
Biophys.J., 99, 2010
3LB2
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BU of 3lb2 by Molmil
Two-site competitive inhibition in dehaloperoxidase-hemoglobin
Descriptor: 4-BROMOPHENOL, DEHALOPEROXIDASE A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, Franzen, S, Thompson, M.K, Davis, M.F, Nicoletti, F.P, Howes, B.D, Smulevich, G.
Deposit date:2010-01-07
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function.
Biophys.J., 99, 2010

 

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