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PDB: 57 results

6MR4
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BU of 6mr4 by Molmil
Crystal structure of the Sth1 bromodomain from S.cerevisiae
Descriptor: Nuclear protein STH1/NPS1
Authors:Seo, H.S, Hashimoto, H, Krolak, A, Debler, E.W, Blus, B.J.
Deposit date:2018-10-11
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Substrate Affinity and Specificity of the ScSth1p Bromodomain Are Fine-Tuned for Versatile Histone Recognition.
Structure, 27, 2019
8ECM
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BU of 8ecm by Molmil
Crystal Structure Analysis of Acetyl-CoA acetyltransferase from Firmicutes bacterium
Descriptor: Acetyl-CoA acetyltransferase
Authors:Seo, H.S, Dhe-Paganon, S.
Deposit date:2022-09-02
Release date:2023-05-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Gut microbial metabolism of 5-ASA diminishes its clinical efficacy in inflammatory bowel disease.
Nat Med, 29, 2023
4MHC
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BU of 4mhc by Molmil
Crystal Structure of a Nucleoporin
Descriptor: Nucleoporin NUP157
Authors:Seo, H.S, Blus, B.J, Blobel, G.
Deposit date:2013-08-29
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and nucleic acid binding activity of the nucleoporin Nup157.
Proc.Natl.Acad.Sci.USA, 110, 2013
3H7N
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BU of 3h7n by Molmil
Structure of Nup120
Descriptor: Nucleoporin NUP120
Authors:Seo, H.S, Ma, Y, Debler, E.W, Blobel, G, Hoelz, A.
Deposit date:2009-04-27
Release date:2009-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional analysis of Nup120 suggests ring formation of the Nup84 complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
3F7F
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BU of 3f7f by Molmil
Structure of Nup120
Descriptor: MERCURY (II) ION, Nucleoporin NUP120
Authors:Seo, H.S, Ma, Y, Debler, E.W, Blobel, G, Hoelz, A.
Deposit date:2008-11-08
Release date:2009-08-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional analysis of Nup120 suggests ring formation of the Nup84 complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
8CUC
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BU of 8cuc by Molmil
Crystal structure analysis of SALL4 zinc finger domain in complex with DNA
Descriptor: DNA (5'-D(P*CP*GP*AP*AP*AP*TP*AP*TP*TP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*TP*AP*AP*TP*AP*TP*TP*TP*CP*G)-3'), Sal-like protein 4, ...
Authors:Seo, H.S, Dhe-Paganon, S.
Deposit date:2022-05-17
Release date:2023-05-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure Analysis of SALL4 Zinc Finger domain in complex with DNA
To Be Published
5WQ3
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BU of 5wq3 by Molmil
Crystal structure of type-II LOG from Corynebacterium glutamicum
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Cytokinin riboside 5'-monophosphate phosphoribohydrolase, ...
Authors:Seo, H, Kim, K.-J.
Deposit date:2016-11-22
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for a novel type of cytokinin-activating protein
Sci Rep, 7, 2017
7DIB
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BU of 7dib by Molmil
Crystal structure of D-threonine aldolase from Filomicrobium marinum
Descriptor: D-threonine aldolase
Authors:Seo, H, Kim, K.-J.
Deposit date:2020-11-18
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cbeta-Selective Aldol Addition of d-Threonine Aldolase by Spatial Constraint of Aldehyde Binding.
Acs Catalysis, 11, 2021
5ZBJ
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BU of 5zbj by Molmil
Crystal structure of type-I LOG from Pseudomonas aeruginosa PAO1
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, IMIDAZOLE, ...
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-02-12
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural insight into molecular mechanism of cytokinin activating protein from Pseudomonas aeruginosa PAO1.
Environ. Microbiol., 20, 2018
5ZI9
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BU of 5zi9 by Molmil
Crystal structure of type-II LOG from Streptomyces coelicolor A3
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, Cytokinin riboside 5'-monophosphate phosphoribohydrolase, ...
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-03-14
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical characterization of the type-II LOG protein from Streptomyces coelicolor A3.
Biochem. Biophys. Res. Commun., 499, 2018
6A6Q
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BU of 6a6q by Molmil
Crystal structure of a lignin peroxidase isozyme H8 variant that is stable at very acidic pH
Descriptor: CALCIUM ION, GLYCEROL, HEME B/C, ...
Authors:Seo, H, Kim, K.-J, Pham, L.T.M.
Deposit date:2018-06-29
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:In silico-designed lignin peroxidase fromPhanerochaete chrysosporiumshows enhanced acid stability for depolymerization of lignin.
Biotechnol Biofuels, 11, 2018
7DG5
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BU of 7dg5 by Molmil
Crystal structure of mouse Smc1-Smc3 hinge domain containing a D574Y mutation
Descriptor: Structural maintenance of chromosomes protein 1A, Structural maintenance of chromosomes protein 3
Authors:Seo, H, Noh, H, Oh, B.-H.
Deposit date:2020-11-11
Release date:2021-11-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Folding of cohesin's coiled coil is important for Scc2/4-induced association with chromosomes.
Elife, 10, 2021
5ZBL
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BU of 5zbl by Molmil
Crystal structure of type-I LOG from Corynebacterium glutamicum in complex with AMP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Cytokinin riboside 5'-monophosphate phosphoribohydrolase, ...
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-02-12
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into molecular mechanism of cytokinin activating protein from Pseudomonas aeruginosa PAO1.
Environ. Microbiol., 20, 2018
6ISS
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BU of 6iss by Molmil
Lignin peroxidase H8 triple mutant S49C/A67C/H239
Descriptor: CALCIUM ION, Ligninase H8, PROTOPORPHYRIN IX CONTAINING FE
Authors:Seo, H, Son, H, Kim, K.-J.
Deposit date:2018-11-19
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Extra disulfide and ionic salt bridge improves the thermostability of lignin peroxidase H8 under acidic condition
Enzyme.Microb.Technol., 148, 2021
5ZBK
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BU of 5zbk by Molmil
Crystal structure of type-I LOG from Pseudomonas aeruginosa PAO1 in complex with AMP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, GLYCEROL, ...
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-02-12
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into molecular mechanism of cytokinin activating protein from Pseudomonas aeruginosa PAO1.
Environ. Microbiol., 20, 2018
6ITK
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BU of 6itk by Molmil
Crystal structure of malate dehydrogenase from Corynebacterium glutamicum ATCC 13032 in complex with NAD and malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-11-23
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Enhanced succinic acid production by Mannheimia employing optimal malate dehydrogenase.
Nat Commun, 11, 2020
6ITL
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BU of 6itl by Molmil
Crystal structure of malate dehydrogenase from Mannheimia succiniciproducens in complex with NAD
Descriptor: GLYCEROL, Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-11-23
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Enhanced succinic acid production by Mannheimia employing optimal malate dehydrogenase.
Nat Commun, 11, 2020
6IJK
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BU of 6ijk by Molmil
Enoyl-CoA hydratase/isomerase family protein from Cupriavidus necator H16
Descriptor: Enoyl-CoA hydratase
Authors:Seo, H, Kim, K.-J.
Deposit date:2018-10-10
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a novel type isomerase of enoyl-CoA hydratase/isomerase family protein from Cupriavidus necator H16
Biotechnol. Bioprocess Eng., 24, 2019
6L3O
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BU of 6l3o by Molmil
Crystal strcuture of Feruloyl-CoA hydratase lyase(FCHL) from Pseudomonas putida KT2440
Descriptor: Hydroxycinnamoyl-CoA hydratase-lyase
Authors:Seok, J, Seo, H, Kim, K.-J.
Deposit date:2019-10-12
Release date:2020-10-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Kinetic and structural analysis for bioproduction of vanillin by feruloyl-CoA hydratase/lyase from Pseudomonas putida KT2440
to be published
6L3P
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BU of 6l3p by Molmil
Crystal strcuture of Feruloyl-CoA hydratase lyase(FCHL) complexed with CoA
Descriptor: COENZYME A, GLYCEROL, Hydroxycinnamoyl-CoA hydratase-lyase
Authors:Seok, J, Seo, H, Kim, K.-J.
Deposit date:2019-10-14
Release date:2020-10-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Kinetic and structural analysis for bioproduction of vanillin by feruloyl-CoA hydratase/lyase from Pseudomonas putida KT2440
to be published
6UCH
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BU of 6uch by Molmil
SMARCB1 nucleosome-interacting C-terminal alpha helix
Descriptor: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Authors:Valencia, A.M, Sun, Z.Y.J, Seo, H.S, Vangos, H.S, Yeoh, Z.C, Mashtalir, N, Dhe-Paganon, S, Kadoch, C.
Deposit date:2019-09-16
Release date:2019-11-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Recurrent SMARCB1 Mutations Reveal a Nucleosome Acidic Patch Interaction Site That Potentiates mSWI/SNF Complex Chromatin Remodeling.
Cell, 179, 2019
4MBR
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BU of 4mbr by Molmil
3.65 Angstrom Crystal Structure of Serine-rich Repeat Protein (Srr2) from Streptococcus agalactiae
Descriptor: Serine-rich repeat protein 2
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Seo, H.S, Seepersaud, R, Doran, K.S, Iverson, T.M, Sullam, P.M, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-19
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Characterization of Fibrinogen Binding by Glycoproteins Srr1 and Srr2 of Streptococcus agalactiae.
J.Biol.Chem., 288, 2013
4MBO
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BU of 4mbo by Molmil
1.65 Angstrom Crystal Structure of Serine-rich Repeat Adhesion Glycoprotein (Srr1) from Streptococcus agalactiae
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BETA-MERCAPTOETHANOL, CALCIUM ION, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Seo, H.S, Seepersaud, R, Doran, K.S, Iverson, T.M, Sullam, P.M, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-19
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of Fibrinogen Binding by Glycoproteins Srr1 and Srr2 of Streptococcus agalactiae.
J.Biol.Chem., 288, 2013
7C11
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BU of 7c11 by Molmil
Formate--tetrahydrofolate ligase from Methylobacterium extorquens CM4 strain
Descriptor: ACETATE ION, CITRATE ANION, Formate-tetrahydrofolate ligase, ...
Authors:Kim, K.-J, Kim, S, Seo, H, Lee, S.
Deposit date:2020-05-02
Release date:2020-10-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.815 Å)
Cite:Biochemical properties and crystal structure of formate-tetrahydrofolate ligase from Methylobacterium extorquens CM4.
Biochem.Biophys.Res.Commun., 528, 2020
8FAU
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BU of 8fau by Molmil
Masking thiol reactivity with thioamide-based MBPs- carbonic anhydrase II complexed with 4-phenylthiazole-2(3H)-thione
Descriptor: 4-phenyl-1,3-thiazole-2(3H)-thione, Carbonic anhydrase 2, SULFATE ION, ...
Authors:Kohlbrand, A.J, Seo, H.
Deposit date:2022-11-28
Release date:2023-03-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Masking thiol reactivity with thioamide, thiourea, and thiocarbamate-based MBPs.
Chem.Commun.(Camb.), 59, 2023

 

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