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PDB: 792 件
5MUZ
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BU of 5muz by Molmil
Structure of a C-terminal domain of a reptarenavirus L protein
分子名称: L protein
著者Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
登録日2017-01-14
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.776 Å)
主引用文献Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
6VKS
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BU of 6vks by Molmil
Cryo-electron microscopy structures of a gonococcal multidrug efflux pump illuminate a mechanism of drug recognition with ampicillin
分子名称: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Moseng, M.A, Lyu, M.
登録日2020-01-22
公開日2020-07-01
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Cryo-EM Structures of a Gonococcal Multidrug Efflux Pump Illuminate a Mechanism of Drug Recognition and Resistance.
Mbio, 11, 2020
6Y2X
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BU of 6y2x by Molmil
RING-DTC domains of Deltex 2, Form 2
分子名称: Probable E3 ubiquitin-protein ligase DTX2, ZINC ION
著者Gabrielsen, M, Buetow, L, Huang, D.T.
登録日2020-02-17
公開日2020-09-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献DELTEX2 C-terminal domain recognizes and recruits ADP-ribosylated proteins for ubiquitination.
Sci Adv, 6, 2020
7VHC
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BU of 7vhc by Molmil
Crystal structure of the STX2a complexed with AR4A peptide
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, Shiga toxin 2 B subunit, inhibitor peptide, ...
著者Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
登録日2021-09-22
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7VHF
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BU of 7vhf by Molmil
Crystal structure of the STX2a complexed with RRA peptide
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, GLYCEROL, RRA peptide, ...
著者Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
登録日2021-09-22
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7VHE
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BU of 7vhe by Molmil
Crystal structure of the STX2a complexed with RRRA peptide
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, GLYCEROL, RRRA peptide, ...
著者Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
登録日2021-09-22
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7VHD
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BU of 7vhd by Molmil
Crystal structure of the STX2a complexed with R4A peptide
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, ARG-ARG-ARG-ARG-ALA, Shiga toxin 2 B subunit, ...
著者Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
登録日2021-09-22
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7KF8
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BU of 7kf8 by Molmil
Cryo-electron microscopy structure of the heavy metal efflux pump CusA in a heterogeneous 2 open and 1 closed protomer conformation
分子名称: COPPER (I) ION, Cation efflux system protein CusA
著者Moseng, M.A.
登録日2020-10-13
公開日2021-04-14
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM Structures of CusA Reveal a Mechanism of Metal-Ion Export.
Mbio, 12, 2021
7KF5
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BU of 7kf5 by Molmil
Cryo-electron microscopy structure of the heavy metal efflux pump CusA in the symmetric closed state
分子名称: Cation efflux system protein CusA
著者Moseng, M.A.
登録日2020-10-13
公開日2021-04-14
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM Structures of CusA Reveal a Mechanism of Metal-Ion Export.
Mbio, 12, 2021
7KF6
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BU of 7kf6 by Molmil
Cryo-electron microscopy structure of the heavy metal efflux pump CusA in a homogeneous binding copper(1) state
分子名称: COPPER (I) ION, Cation efflux system protein CusA
著者Moseng, M.A.
登録日2020-10-13
公開日2021-04-14
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM Structures of CusA Reveal a Mechanism of Metal-Ion Export.
Mbio, 12, 2021
7KF7
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BU of 7kf7 by Molmil
Cryo-electron microscopy structure of the heavy metal efflux pump CusA in a heterogeneous 1 open and 2 closed protomer conformation
分子名称: COPPER (I) ION, Cation efflux system protein CusA
著者Moseng, M.A.
登録日2020-10-13
公開日2021-04-14
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM Structures of CusA Reveal a Mechanism of Metal-Ion Export.
Mbio, 12, 2021
4LTN
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BU of 4ltn by Molmil
Crystal structures of NADH:FMN oxidoreductase (EMOB) - FMN, NADH complex
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN MONONUCLEOTIDE, NADH-dependent FMN reductase, ...
著者Nissen, M.S, Youn, B, Knowles, B.D, Ballinger, J.W, Jun, S, Belchik, S.M, Xun, L, Kang, C.
登録日2013-07-23
公開日2013-08-07
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Crystal structures of NADH:FMN oxidoreductase (EmoB) at different stages of catalysis.
J.Biol.Chem., 283, 2008
6B2U
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BU of 6b2u by Molmil
Crystal structure of Xanthomonas campestris OleA H285N with Cerulenin
分子名称: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE, 3-oxoacyl-[ACP] synthase III, ...
著者Jensen, M.R, Goblirsch, B.R, Esler, M.A, Christenson, J.K, Mohamed, F.A, Wackett, L.P, Wilmot, C.M.
登録日2017-09-20
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献The role of OleA His285 in substrate coordination of long-chain acyl-CoA
To be published
5MUS
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BU of 5mus by Molmil
Structure of the C-terminal domain of a reptarenavirus L protein
分子名称: CHLORIDE ION, GLYCEROL, L protein
著者Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
登録日2017-01-14
公開日2017-05-17
最終更新日2017-05-24
実験手法X-RAY DIFFRACTION (2.009 Å)
主引用文献Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
6B2S
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BU of 6b2s by Molmil
Crystal structure of Xanthomonas campestris OleA H285N
分子名称: 3-oxoacyl-[ACP] synthase III, GLYCEROL, PHOSPHATE ION
著者Jensen, M.R, Goblirsch, B.R, Esler, M.A, Christenson, J.K, Mohamed, F.A, Wackett, L.P, Wilmot, C.M.
登録日2017-09-20
公開日2018-02-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The role of OleA His285 in orchestration of long-chain acyl-coenzyme A substrates.
FEBS Lett., 592, 2018
6B2R
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BU of 6b2r by Molmil
Crystal structure of Xanthomonas campestris OleA H285A
分子名称: 3-oxoacyl-[ACP] synthase III, GLYCEROL
著者Jensen, M.R, Goblirsch, B.R, Esler, M.A, Christenson, J.K, Mohamed, F.A, Wackett, L.P, Wilmot, C.M.
登録日2017-09-20
公開日2018-02-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The role of OleA His285 in orchestration of long-chain acyl-coenzyme A substrates.
FEBS Lett., 592, 2018
6B2T
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BU of 6b2t by Molmil
Crystal structure of Xanthomonas campestris OleA H285D
分子名称: 3-oxoacyl-[ACP] synthase III, GLYCEROL, PHOSPHATE ION
著者Jensen, M.R, Goblirsch, B.R, Esler, M.A, Christenson, J.K, Mohamed, F.A, Wackett, L.P, Wilmot, C.M.
登録日2017-09-20
公開日2018-02-28
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The role of OleA His285 in orchestration of long-chain acyl-coenzyme A substrates.
FEBS Lett., 592, 2018
5MV0
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BU of 5mv0 by Molmil
Structure of an N-terminal domain of a reptarenavirus L protein
分子名称: L protein, PHOSPHATE ION
著者Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
登録日2017-01-14
公開日2017-05-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
8A8G
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BU of 8a8g by Molmil
ATP sulfurylase from Methanothermococcus thermolithotrophicus - orthorhombic form
分子名称: ATP sulfurylase from Methanothermococcus thermolithotrophicus, GLYCEROL, ZINC ION
著者Jespersen, M, Wagner, T.
登録日2022-06-23
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus.
Nat Microbiol, 8, 2023
5MUY
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BU of 5muy by Molmil
Structure of a C-terminal domain of a reptarenavirus L protein with m7GTP
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, L protein
著者Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
登録日2017-01-14
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
6QK9
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BU of 6qk9 by Molmil
A dimeric ubiquitin formed by a single amino acid substitution
分子名称: Polyubiquitin-B
著者Gabrielsen, M, Kowalczyk, D, Buetow, L, Huang, D.T.
登録日2019-01-28
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.231 Å)
主引用文献Identification and Characterization of Mutations in Ubiquitin Required for Non-covalent Dimer Formation.
Structure, 27, 2019
5EPT
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BU of 5ept by Molmil
Crystal Structure of S. cerevisiae TSA2 in the disulfide state
分子名称: Peroxiredoxin TSA2
著者Nielsen, M.H, Kidmose, R.T, Jenner, L.B.
登録日2015-11-12
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Structure of TSA2 reveals novel features of the active-site loop of peroxiredoxins.
Acta Crystallogr D Struct Biol, 72, 2016
7DNN
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BU of 7dnn by Molmil
Crystal structure of the AgCarB2-C2 complex with homoorientin
分子名称: 2-[3,4-bis(oxidanyl)phenyl]-6-[(2S,3R,4R,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]-5,7-bis(oxidanyl)chromen-4-one, AP_endonuc_2 domain-containing protein, AgCarC2, ...
著者Senda, M, Kumano, T, Watanabe, S, Kobayashi, M, Senda, T.
登録日2020-12-10
公開日2021-10-20
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for the metabolism of xenobiotic C-glycosides by intestinal bacteria
Nat Commun, 2021
7EM7
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BU of 7em7 by Molmil
Crystal structure of the PI5P4Kbeta N203D-XTP complex
分子名称: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者Senda, M, Senda, T.
登録日2021-04-13
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM3
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BU of 7em3 by Molmil
Crystal structure of the PI5P4Kbeta-2a-ATP complex
分子名称: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者Senda, M, Senda, T.
登録日2021-04-13
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022

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件を2024-09-04に公開中

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