Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 285 results

2NZV
DownloadVisualize
BU of 2nzv by Molmil
Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors G6P and FBP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Catabolite control protein, Phosphocarrier protein HPr, ...
Authors:Schumacher, M.A, Hillen, W, Brennan, R.G.
Deposit date:2006-11-25
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate.
J.Mol.Biol., 368, 2007
2OEN
DownloadVisualize
BU of 2oen by Molmil
Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors glucose-6-phosphate and fructose-1,6-bisphosphate
Descriptor: Catabolite control protein, Phosphocarrier protein HPr
Authors:Schumacher, M.A, Seidel, G, Hillen, W, Brennan, R.G.
Deposit date:2006-12-30
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate.
J.Mol.Biol., 368, 2007
1JLS
DownloadVisualize
BU of 1jls by Molmil
STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE URACIL/CPR 2 MUTANT C128V
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Schumacher, M.A, Bashor, C.J, Otsu, K, Zu, S, Parry, R, Ullman, B, Brennan, R.G.
Deposit date:2001-07-16
Release date:2002-01-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structural mechanism of GTP stabilized oligomerization and catalytic activation of the Toxoplasma gondii uracil phosphoribosyltransferase.
Proc.Natl.Acad.Sci.USA, 99, 2002
2Q2K
DownloadVisualize
BU of 2q2k by Molmil
Structure of nucleic-acid binding protein
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*AP*GP*TP*AP*TP*AP*(5IU)P*AP*CP*(5IU)P*AP*GP*TP*AP*TP*AP*TP*AP*CP*T)-3'), Hypothetical protein
Authors:Schumacher, M.A, Glover, T, Firth, N.
Deposit date:2007-05-28
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Segrosome structure revealed by a complex of ParR with centromere DNA.
Nature, 450, 2007
4GCL
DownloadVisualize
BU of 4gcl by Molmil
structure of no-dna factor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*T)-3'), Nucleoid occlusion factor SlmA
Authors:Schumacher, M.A.
Deposit date:2012-07-30
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
5KEC
DownloadVisualize
BU of 5kec by Molmil
Structure of K. pneumonia MrkH in its apo state.
Descriptor: Flagellar brake protein YcgR
Authors:Schumacher, M.
Deposit date:2016-06-09
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:to be published: Structures of K. pneumonia MrkH: dual utilization of the PilZ fold for c-di-GMP and DNA binding by a novel activator of biofilm genes
To Be Published
1BD3
DownloadVisualize
BU of 1bd3 by Molmil
STRUCTURE OF THE APO URACIL PHOSPHORIBOSYLTRANSFERASE, 2 MUTANT C128V
Descriptor: PHOSPHATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE
Authors:Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
Deposit date:1998-05-12
Release date:1999-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
5KED
DownloadVisualize
BU of 5ked by Molmil
Structure of the 2.65 Angstrom P2(1) crystal of K. pneumonia MrkH
Descriptor: Flagellar brake protein YcgR
Authors:Schumacher, M.
Deposit date:2016-06-09
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:To be released: Structures of K. pneumonia MrkH: dual utilization of the PilZ fold for c-di-GMP and DNA binding by a novel activator of biofilm genes
To Be Published
1BD4
DownloadVisualize
BU of 1bd4 by Molmil
UPRT-URACIL COMPLEX
Descriptor: PHOSPHATE ION, URACIL, URACIL PHOSPHORIBOSYLTRANSFERASE
Authors:Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
Deposit date:1998-05-12
Release date:1999-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
1QX7
DownloadVisualize
BU of 1qx7 by Molmil
Crystal structure of apoCaM bound to the gating domain of small conductance Ca2+-activated potassium channel
Descriptor: Calmodulin, Small conductance calcium-activated potassium channel protein 2
Authors:Schumacher, M.A, Crum, M, Miller, M.C.
Deposit date:2003-09-04
Release date:2004-08-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Crystal structures of apocalmodulin and an apocalmodulin/SK potassium channel gating domain complex.
STRUCTURE, 12, 2004
3MKZ
DownloadVisualize
BU of 3mkz by Molmil
Structure of SopB(155-272)-18mer complex, P21 form
Descriptor: CALCIUM ION, DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB
Authors:Schumacher, M.A.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
4RX6
DownloadVisualize
BU of 4rx6 by Molmil
Structure of B. subtilis GlnK-ATP complex to 2.6 Angstrom
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Nitrogen regulatory PII-like protein
Authors:Schumacher, M.A, Cuthbert, B, Tonthat, N, Chinnam, N.G, Whitfill, T.
Deposit date:2014-12-09
Release date:2015-12-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5994 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
1LIO
DownloadVisualize
BU of 1lio by Molmil
STRUCTURE OF APO T. GONDII ADENOSINE KINASE
Descriptor: adenosine kinase
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-06-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
4R22
DownloadVisualize
BU of 4r22 by Molmil
TnrA-DNA complex
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R24
DownloadVisualize
BU of 4r24 by Molmil
Complete dissection of B. subtilis nitrogen homeostatic circuitry
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
1QX5
DownloadVisualize
BU of 1qx5 by Molmil
Crystal structure of apoCalmodulin
Descriptor: Calmodulin
Authors:Schumacher, M.A, Crum, M, Miller, M.C.
Deposit date:2003-09-04
Release date:2004-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structures of apocalmodulin and an apocalmodulin/SK potassium channel gating domain complex.
STRUCTURE, 12, 2004
3PM1
DownloadVisualize
BU of 3pm1 by Molmil
Structure of QacR E90Q bound to Ethidium
Descriptor: ETHIDIUM, HTH-type transcriptional regulator qacR, SULFATE ION
Authors:Schumacher, M.A.
Deposit date:2010-11-15
Release date:2011-07-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A single acidic residue can guide binding site selection but does not govern QacR cationic-drug affinity.
Plos One, 6, 2011
3EZ2
DownloadVisualize
BU of 3ez2 by Molmil
Partition protein-ADP complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Schumacher, M.A, Dunham, T.D, Xu, W, Funnell, B.
Deposit date:2008-10-22
Release date:2009-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA.
Embo J., 28, 2009
1KQ2
DownloadVisualize
BU of 1kq2 by Molmil
Crystal Structure of an Hfq-RNA Complex
Descriptor: 5'-R(*AP*UP*UP*UP*UP*UP*G)-3', Host factor for Q beta
Authors:Schumacher, M.A, Pearson, R.F, Moller, T, Valentin-Hansen, P, Brennan, R.G.
Deposit date:2002-01-03
Release date:2002-07-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein.
EMBO J., 21, 2002
3M8K
DownloadVisualize
BU of 3m8k by Molmil
Protein structure of type III plasmid segregation TubZ
Descriptor: FtsZ/tubulin-related protein
Authors:Schumacher, M.A, Ni, L.
Deposit date:2010-03-18
Release date:2010-07-07
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
1PNR
DownloadVisualize
BU of 1pnr by Molmil
PURINE REPRESSOR-HYPOXANTHINE-PURF-OPERATOR COMPLEX
Descriptor: DNA (5'-D(*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*TP*TP*TP*TP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR)
Authors:Schumacher, M.A, Choi, K.Y, Zalkin, H, Brennan, R.G.
Deposit date:1995-03-29
Release date:1995-11-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of LacI member, PurR, bound to DNA: minor groove binding by alpha helices.
Science, 266, 1994
1KQ1
DownloadVisualize
BU of 1kq1 by Molmil
1.55 A Crystal structure of the pleiotropic translational regulator, Hfq
Descriptor: ACETIC ACID, Host Factor for Q beta
Authors:Schumacher, M.A, Pearson, R.F, Moller, T, Valentin-Hansen, P, Brennan, R.G.
Deposit date:2002-01-03
Release date:2002-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein.
EMBO J., 21, 2002
5I41
DownloadVisualize
BU of 5i41 by Molmil
Structure of the apo RacA DNA binding domain
Descriptor: Chromosome-anchoring protein RacA
Authors:schumacher, M.A.
Deposit date:2016-02-11
Release date:2016-05-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular insights into DNA binding and anchoring by the Bacillus subtilis sporulation kinetochore-like RacA protein.
Nucleic Acids Res., 44, 2016
5KOA
DownloadVisualize
BU of 5koa by Molmil
Structure of Escherichia coli ZapD bound to the C-terminal tail of FtsZ
Descriptor: C-terminal tail of FtsZ, Cell division protein ZapD
Authors:Schumacher, M.
Deposit date:2016-06-29
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structure of Escherichia coli ZapD bound to the C-terminal tail of FtsZ
To Be Published
1QVT
DownloadVisualize
BU of 1qvt by Molmil
CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO THE DRUG PROFLAVINE
Descriptor: PROFLAVIN, SULFATE ION, Transcriptional regulator qacR
Authors:Schumacher, M.A, Miller, M.C, Brennan, R.G.
Deposit date:2003-08-28
Release date:2004-08-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural mechanism of the simultaneous binding of two drugs to a multidrug-binding protein
Embo J., 23, 2004

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon