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PDB: 63 results

8QVY
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Human NDPK-C unliganded
Descriptor: Nucleoside diphosphate kinase 3, PHOSPHATE ION
Authors:Werten, S, Amjadi, R, Scheffzek, K.
Deposit date:2023-10-18
Release date:2024-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW3
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Human NDPK-C in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION
Authors:Werten, S, Amjadi, R, Scheffzek, K.
Deposit date:2023-10-18
Release date:2024-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.255 Å)
Cite:Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW2
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BU of 8qw2 by Molmil
Human NDPK-C in complex with UDP and Mg2+
Descriptor: MAGNESIUM ION, Nucleoside diphosphate kinase 3, URIDINE-5'-DIPHOSPHATE
Authors:Werten, S, Amjadi, R, Scheffzek, K.
Deposit date:2023-10-18
Release date:2024-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW0
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BU of 8qw0 by Molmil
Human NDPK-C in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION
Authors:Werten, S, Amjadi, R, Scheffzek, K.
Deposit date:2023-10-18
Release date:2024-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.175 Å)
Cite:Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
1RJ4
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BU of 1rj4 by Molmil
Structure of a Cell Wall Invertase Inhibitor from Tobacco in Complex with Cd2+
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CADMIUM ION, invertase inhibitor
Authors:Hothorn, M, D'Angelo, I, Marquez, J.A, Greiner, S, Scheffzek, K.
Deposit date:2003-11-18
Release date:2004-02-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:The invertase inhibitor Nt-CIF from tobacco: a highly thermostable four-helix bundle with an unusual N-terminal extension
J.Mol.Biol., 335, 2004
3G3Q
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Crystal structure of a eukaryotic polyphosphate polymerase in complex with a phosphate polymer
Descriptor: PHOSPHATE ION, SULFATE ION, Vacuolar transporter chaperone 4
Authors:Hothorn, M, Scheffzek, K.
Deposit date:2009-02-02
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase.
Science, 324, 2009
2D4Q
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BU of 2d4q by Molmil
Crystal structure of the Sec-PH domain of the human neurofibromatosis type 1 protein
Descriptor: Neurofibromin, OXTOXYNOL-10, PYROPHOSPHATE 2-
Authors:D'angelo, I, Welti, S, Bonneau, F, Scheffzek, K.
Deposit date:2005-10-22
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel bipartite phospholipid-binding module in the neurofibromatosis type 1 protein
Embo Rep., 7, 2006
3IPR
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BU of 3ipr by Molmil
Crystal structure of the Enterococcus faecalis gluconate specific EIIA phosphotransferase system component
Descriptor: CALCIUM ION, PTS system, IIA component
Authors:Reinelt, S, Welti, S, Scheffzek, K.
Deposit date:2009-08-18
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Enterococcus faecalis EIIA(gnt) PTS component.
Biochem.Biophys.Res.Commun., 388, 2009
1RJ1
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BU of 1rj1 by Molmil
Crystal Structure of a Cell Wall Invertase Inhibitor from Tobacco
Descriptor: invertase inhibitor
Authors:Hothorn, M, D'Angelo, I, Marquez, J.A, Greiner, S, Scheffzek, K.
Deposit date:2003-11-18
Release date:2004-02-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The invertase inhibitor Nt-CIF from tobacco: a highly thermostable four-helix bundle with an unusual N-terminal extension
J.Mol.Biol., 335, 2004
2FXK
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BU of 2fxk by Molmil
Crystal structure of the macro-domain of human core histone variant macroH2A1.1 (form A)
Descriptor: H2A histone family, member Y isoform 1
Authors:Kustatscher, G, Hothorn, M, Pugieux, C, Scheffzek, K, Ladurner, A.G.
Deposit date:2006-02-06
Release date:2006-02-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Splicing regulates NAD metabolite binding to histone macroH2A.
Nat.Struct.Mol.Biol., 12, 2005
2E2X
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BU of 2e2x by Molmil
Sec14 Homology Module of Neurofibromin in complex with phosphatitylethanolamine
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Neurofibromin, PYROPHOSPHATE 2-
Authors:D'Angelo, I, Welti, S, Scheffzek, K.
Deposit date:2006-11-18
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The sec14 homology module of neurofibromin binds cellular glycerophospholipids: mass spectrometry and structure of a lipid complex
J.Mol.Biol., 366, 2007
2HRO
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BU of 2hro by Molmil
Structure of the full-lenght Enzyme I of the PTS system from Staphylococcus carnosus
Descriptor: Phosphoenolpyruvate-protein phosphotransferase, SULFATE ION
Authors:Marquez, J.A, Reinelt, S, Koch, B, Engelman, R, Hengstenberg, W, Scheffzek, K.
Deposit date:2006-07-20
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the full-length enzyme I of the phosphoenolpyruvate-dependent sugar phosphotransferase system
J.Biol.Chem., 281, 2006
1GZS
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BU of 1gzs by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE GEF DOMAIN OF THE SALMONELLA TYPHIMURIUM SOPE TOXIN AND HUMAN Cdc42
Descriptor: GTP-BINDING PROTEIN, SOPE, SULFATE ION
Authors:Buchwald, G, Friebel, A, Galan, J.E, Hardt, W.D, Wittinghofer, A, Scheffzek, K.
Deposit date:2002-06-05
Release date:2002-09-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for the Reversible Activation of a Rho Protein by the Bacterial Toxin Sope
Embo J., 21, 2002
2GWD
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BU of 2gwd by Molmil
Crystal structure of plant glutamate cysteine ligase in complex with Mg2+ and L-glutamate
Descriptor: ACETATE ION, GLUTAMIC ACID, Glutamate cysteine ligase, ...
Authors:Hothorn, M, Wachter, A, Gromes, R, Stuwe, T, Rausch, T, Scheffzek, K.
Deposit date:2006-05-04
Release date:2006-06-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural basis for the redox control of plant glutamate cysteine ligase.
J.Biol.Chem., 281, 2006
3G3T
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BU of 3g3t by Molmil
Crystal structure of a eukaryotic polyphosphate polymerase in complex with orthophosphate
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, Vacuolar transporter chaperone 4
Authors:Lenherr, E.D, Hothorn, M, Scheffzek, K.
Deposit date:2009-02-02
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase.
Science, 324, 2009
3CB5
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BU of 3cb5 by Molmil
Crystal Structure of the S. pombe Peptidase Homology Domain of FACT complex subunit Spt16 (form A)
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FACT complex subunit spt16
Authors:Stuwe, T, Hothorn, M, Lejeune, E, Bortfeld-Miller, M, Scheffzek, K, Ladurner, A.G.
Deposit date:2008-02-21
Release date:2008-06-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The FACT Spt16 "peptidase" domain is a histone H3-H4 binding module
Proc.Natl.Acad.Sci.USA, 105, 2008
3IID
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BU of 3iid by Molmil
Crystal structure of the macro domain of human histone macroH2A1.1 in complex with ADP-ribose (form A)
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Core histone macro-H2A.1, Isoform 1, ...
Authors:Hothorn, M, Bortfeld, M, Ladurner, A.G, Scheffzek, K.
Deposit date:2009-07-31
Release date:2009-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A macrodomain-containing histone rearranges chromatin upon sensing PARP1 activation.
Nat.Struct.Mol.Biol., 16, 2009
3G3O
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BU of 3g3o by Molmil
Crystal structure of the cytoplasmic tunnel domain in yeast Vtc2p
Descriptor: SULFATE ION, Vacuolar transporter chaperone 2
Authors:Hothorn, M, Scheffzek, K.
Deposit date:2009-02-02
Release date:2009-05-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase.
Science, 324, 2009
3IIF
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BU of 3iif by Molmil
Crystal structure of the macro domain of human histone macroH2A1.1 in complex with ADP-ribose (form B)
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Core histone macro-H2A.1, Isoform 1
Authors:Hothorn, M, Bortfeld, M, Ladurner, A.G, Scheffzek, K.
Deposit date:2009-07-31
Release date:2009-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A macrodomain-containing histone rearranges chromatin upon sensing PARP1 activation.
Nat.Struct.Mol.Biol., 16, 2009
1HCI
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BU of 1hci by Molmil
CRYSTAL STRUCTURE OF THE ROD DOMAIN OF ALPHA-ACTININ
Descriptor: ALPHA-ACTININ 2
Authors:Ylanne, J, Scheffzek, K, Young, P, Saraste, M.
Deposit date:2001-05-04
Release date:2001-06-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Alpha-Actinin Rod Reveals an Extensive Torsional Twist
Structure, 9, 2001
1OPL
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BU of 1opl by Molmil
Structural basis for the auto-inhibition of c-Abl tyrosine kinase
Descriptor: 6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE, MYRISTIC ACID, proto-oncogene tyrosine-protein kinase
Authors:Nagar, B, Hantschel, O, Young, M.A, Scheffzek, K, Veach, D, Bornmann, W, Clarkson, B, Superti-Furga, G, Kuriyan, J.
Deposit date:2003-03-06
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structural basis for the autoinhibition of c-Abl tyrosine kinase
Cell(Cambridge,Mass.), 112, 2003
1OPK
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BU of 1opk by Molmil
Structural basis for the auto-inhibition of c-Abl tyrosine kinase
Descriptor: 6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE, GLYCEROL, MYRISTIC ACID, ...
Authors:Nagar, B, Hantschel, O, Young, M.A, Scheffzek, K, Veach, D, Bornmann, W, Clarkson, B, Superti-Furga, G, Kuriyan, J.
Deposit date:2003-03-06
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the autoinhibition of c-Abl tyrosine kinase
Cell(Cambridge,Mass.), 112, 2003
1OPJ
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Structural basis for the auto-inhibition of c-Abl tyrosine kinase
Descriptor: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, CHLORIDE ION, MYRISTIC ACID, ...
Authors:Nagar, B, Hantschel, O, Young, M.A, Scheffzek, K, Veach, D, Bornmann, W, Clarkson, B, Superti-Furga, G, Kuriyan, J.
Deposit date:2003-03-06
Release date:2003-04-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for the autoinhibition of c-Abl tyrosine kinase
Cell(Cambridge,Mass.), 112, 2003
2CJ6
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BU of 2cj6 by Molmil
Crystal Structure of a Cell Wall Invertase Inhibitor from Tobacco (pH 7.5)
Descriptor: INVERTASE INHIBITOR, IODIDE ION
Authors:Hothorn, M, Scheffzek, K.
Deposit date:2006-03-29
Release date:2006-03-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Multiple Crystal Forms of the Cell-Wall Invertase Inhibitor from Tobacco Support High Conformational Rigidity Over a Broad Ph-Range
Acta Crystallogr.,Sect.D, 62, 2006
1JAH
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BU of 1jah by Molmil
H-RAS P21 PROTEIN MUTANT G12P, COMPLEXED WITH GUANOSINE-5'-[BETA,GAMMA-METHYLENE] TRIPHOSPHATE AND MAGNESIUM
Descriptor: C-HA-RAS, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Schweins, T, Scheffzek, K, Assheuer, R, Wittinghofer, A.
Deposit date:1996-12-15
Release date:1997-07-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The role of the metal ion in the p21ras catalysed GTP-hydrolysis: Mn2+ versus Mg2+.
J.Mol.Biol., 266, 1997

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