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PDB: 35 件

5G5X
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CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - nucleotide-bound form
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, NANOBODY, ...
著者Schacherl, M, Baumann, U.
登録日2016-06-09
公開日2017-05-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
5G5R
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BU of 5g5r by Molmil
CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - apo form
分子名称: NANOBODY, SITE-2 PROTEASE, SULFATE ION
著者Schacherl, M, Baumann, U.
登録日2016-06-02
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
5A0R
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BU of 5a0r by Molmil
Product peptide-bound structure of metalloprotease Zmp1 variant E143A from Clostridium difficile
分子名称: GLYCEROL, PRODUCT PEPTIDE, ZINC ION, ...
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-22
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.251 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0P
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Apo-structure of metalloprotease Zmp1 from Clostridium difficile
分子名称: ZINC ION, ZINC METALLOPROTEASE ZMP1
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-22
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.398 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0X
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Substrate peptide-bound structure of metalloprotease Zmp1 variant E143AY178F from Clostridium difficile
分子名称: SUBSTRATE PEPTIDE, ZINC ION, ZINC METALLOPROTEASE ZMP1
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-23
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0S
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BU of 5a0s by Molmil
Apo-structure of metalloprotease Zmp1 variant E143A from Clostridium difficile
分子名称: ZINC ION, ZINC METALLOPROTEASE ZMP1
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-22
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
4BGB
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BU of 4bgb by Molmil
Nucleotide-bound closed form of a putative sugar kinase MK0840 from Methanopyrus kandleri
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, GLYCEROL, ...
著者Schacherl, M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BG9
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BU of 4bg9 by Molmil
Apo form of a putative sugar kinase MK0840 from Methanopyrus kandleri (orthorhombic space group)
分子名称: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
著者Schacherl, M, Waltersperger, S.M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BGA
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BU of 4bga by Molmil
Nucleotide-bound open form of a putative sugar kinase MK0840 from Methanopyrus kandleri
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者Schacherl, M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BG8
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BU of 4bg8 by Molmil
Apo form of a putative sugar kinase MK0840 from Methanopyrus kandleri (monoclinic space group)
分子名称: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
著者Schacherl, M, Waltersperger, S.M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4WW0
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BU of 4ww0 by Molmil
Truncated FtsH from A. aeolicus
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH, ZINC ION
著者Vostrukhina, M, Baumann, U, Schacherl, M, Bieniossek, C, Lanz, M, Baumgartner, R.
登録日2014-11-09
公開日2015-05-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer.
Acta Crystallogr.,Sect.D, 71, 2015
5N12
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BU of 5n12 by Molmil
Crystal structure of TCE treated rPPEP-1
分子名称: 2,2,2-tris-chloroethanol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ...
著者Pichlo, C, Schacherl, M, Baumann, U.
登録日2017-02-04
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5D88
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BU of 5d88 by Molmil
The Structure of the U32 Peptidase Mk0906
分子名称: ACETATE ION, Predicted protease of the collagenase family, ZINC ION
著者Baumann, U, Schacherl, M, Monatda, A.A.M.
登録日2015-08-15
公開日2015-12-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献The first crystal structure of the peptidase domain of the U32 peptidase family.
Acta Crystallogr.,Sect.D, 71, 2015
6GZ0
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BU of 6gz0 by Molmil
Crystal Structure of the LeuO Effector Binding Domain
分子名称: CHLORIDE ION, HTH-type transcriptional regulator LeuO, SULFATE ION
著者Fragel, S, Montada, A.M, Baumann, U, Schacherl, M, Schnetz, K.
登録日2018-07-02
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Characterization of the pleiotropic LysR-type transcription regulator LeuO of Escherichia coli.
Nucleic Acids Res., 47, 2019
8PEG
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BU of 8peg by Molmil
Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-13
公開日2024-03-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8PKL
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BU of 8pkl by Molmil
Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-26
公開日2024-03-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
5FR2
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BU of 5fr2 by Molmil
Farnesylated RhoA-GDP in complex with RhoGDI-alpha, lysine acetylated at K178
分子名称: FARNESYL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Kuhlmann, N, Wroblowski, S, Knyphausen, P, de Boor, S, Brenig, J, Zienert, A.Y, Meyer-Teschendorf, K, Praefcke, G.J.K, Nolte, H, Krueger, M, Schacherl, M, Baumann, U, James, L.C, Chin, J.W, Lammers, M.
登録日2015-12-15
公開日2016-01-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structural and Mechanistic Insights Into the Regulation of the Fundamental Rho-Regulator Rhogdi Alpha by Lysine Acetylation.
J.Biol.Chem., 291, 2016
5FYQ
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BU of 5fyq by Molmil
Sirt2 in complex with a 13-mer trifluoroacetylated Ran peptide
分子名称: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2, RAN AA 31-43, SULFATE ION, ...
著者Knyphausen, P, de Boor, S, Scislowski, L, Extra, A, Baldus, L, Schacherl, M, Baumann, U, Neundorf, I, Lammers, M.
登録日2016-03-09
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights Into Lysine-Deacetylation of Natively Folded Substrate Proteins by Sirtuins.
J.Biol.Chem., 291, 2016
6GZ2
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BU of 6gz2 by Molmil
Crystal Structure of the LeuO Effector Binding Domain
分子名称: HTH-type transcriptional regulator LeuO, MALONATE ION
著者Fragel, S, Montada, A.M, Baumann, U, Schacherl, M, Schnetz, K.
登録日2018-07-02
公開日2019-06-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Characterization of the pleiotropic LysR-type transcription regulator LeuO of Escherichia coli.
Nucleic Acids Res., 47, 2019
6GZ1
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BU of 6gz1 by Molmil
Crystal Structure of the LeuO Effector Binding Domain
分子名称: HTH-type transcriptional regulator LeuO, SULFATE ION
著者Fragel, S, Montada, A.M, Baumann, U, Schacherl, M, Schnetz, K.
登録日2018-07-02
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Characterization of the pleiotropic LysR-type transcription regulator LeuO of Escherichia coli.
Nucleic Acids Res., 47, 2019
8RCT
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BU of 8rct by Molmil
Escherichia coli paused disome complex (Rotated disome interface class 2)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-07
公開日2024-03-06
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (5.32 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
7N2U
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BU of 7n2u by Molmil
Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation
分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
著者Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, K.S, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
登録日2021-05-29
公開日2021-07-14
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Structural basis of early translocation events on the ribosome.
Nature, 595, 2021
7N1P
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Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
著者Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, S.K, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
登録日2021-05-28
公開日2021-07-14
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.33 Å)
主引用文献Structural basis of early translocation events on the ribosome.
Nature, 595, 2021
7N30
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Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation
分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
著者Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, K.S, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
登録日2021-05-30
公開日2021-07-14
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Structural basis of early translocation events on the ribosome.
Nature, 595, 2021
7N2V
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BU of 7n2v by Molmil
Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)
分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
著者Rundlet, E.J, Holm, M, Schacherl, M, Natchiar, K.S, Altman, R.B, Spahn, C.M.T, Myasnikov, A.G, Blanchard, S.C.
登録日2021-05-29
公開日2021-07-14
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献Structural basis of early translocation events on the ribosome.
Nature, 595, 2021

 

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