Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 35 件

5G5R
DownloadVisualize
BU of 5g5r by Molmil
CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - apo form
分子名称: NANOBODY, SITE-2 PROTEASE, SULFATE ION
著者Schacherl, M, Baumann, U.
登録日2016-06-02
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
5G5X
DownloadVisualize
BU of 5g5x by Molmil
CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - nucleotide-bound form
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, NANOBODY, ...
著者Schacherl, M, Baumann, U.
登録日2016-06-09
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
5A0R
DownloadVisualize
BU of 5a0r by Molmil
Product peptide-bound structure of metalloprotease Zmp1 variant E143A from Clostridium difficile
分子名称: GLYCEROL, PRODUCT PEPTIDE, ZINC ION, ...
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-22
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.251 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0S
DownloadVisualize
BU of 5a0s by Molmil
Apo-structure of metalloprotease Zmp1 variant E143A from Clostridium difficile
分子名称: ZINC ION, ZINC METALLOPROTEASE ZMP1
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-22
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0P
DownloadVisualize
BU of 5a0p by Molmil
Apo-structure of metalloprotease Zmp1 from Clostridium difficile
分子名称: ZINC ION, ZINC METALLOPROTEASE ZMP1
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-22
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.398 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0X
DownloadVisualize
BU of 5a0x by Molmil
Substrate peptide-bound structure of metalloprotease Zmp1 variant E143AY178F from Clostridium difficile
分子名称: SUBSTRATE PEPTIDE, ZINC ION, ZINC METALLOPROTEASE ZMP1
著者Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
登録日2015-04-23
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
4BGB
DownloadVisualize
BU of 4bgb by Molmil
Nucleotide-bound closed form of a putative sugar kinase MK0840 from Methanopyrus kandleri
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, GLYCEROL, ...
著者Schacherl, M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BG9
DownloadVisualize
BU of 4bg9 by Molmil
Apo form of a putative sugar kinase MK0840 from Methanopyrus kandleri (orthorhombic space group)
分子名称: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
著者Schacherl, M, Waltersperger, S.M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BGA
DownloadVisualize
BU of 4bga by Molmil
Nucleotide-bound open form of a putative sugar kinase MK0840 from Methanopyrus kandleri
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者Schacherl, M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BG8
DownloadVisualize
BU of 4bg8 by Molmil
Apo form of a putative sugar kinase MK0840 from Methanopyrus kandleri (monoclinic space group)
分子名称: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
著者Schacherl, M, Waltersperger, S.M, Baumann, U.
登録日2013-03-24
公開日2013-11-27
最終更新日2019-03-06
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
3ZVS
DownloadVisualize
BU of 3zvs by Molmil
Crystal structure of Archaemetzincin (AmzA) from Archaeoglobus fulgidus at 1.4 A resolution complexed with malonate
分子名称: ARCHAEMETZINCIN, MALONATE ION, ZINC ION
著者Graef, C, Schacherl, M, Baumann, U.
登録日2011-07-27
公開日2012-08-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.396 Å)
主引用文献Crystal Structures of Archaemetzincin Reveal a Moldable Substrate-Binding Site.
Plos One, 7, 2012
4WW0
DownloadVisualize
BU of 4ww0 by Molmil
Truncated FtsH from A. aeolicus
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH, ZINC ION
著者Vostrukhina, M, Baumann, U, Schacherl, M, Bieniossek, C, Lanz, M, Baumgartner, R.
登録日2014-11-09
公開日2015-05-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer.
Acta Crystallogr.,Sect.D, 71, 2015
5N12
DownloadVisualize
BU of 5n12 by Molmil
Crystal structure of TCE treated rPPEP-1
分子名称: 2,2,2-tris-chloroethanol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ...
著者Pichlo, C, Schacherl, M, Baumann, U.
登録日2017-02-04
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5D88
DownloadVisualize
BU of 5d88 by Molmil
The Structure of the U32 Peptidase Mk0906
分子名称: ACETATE ION, Predicted protease of the collagenase family, ZINC ION
著者Baumann, U, Schacherl, M, Monatda, A.A.M.
登録日2015-08-15
公開日2015-12-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献The first crystal structure of the peptidase domain of the U32 peptidase family.
Acta Crystallogr.,Sect.D, 71, 2015
8PEG
DownloadVisualize
BU of 8peg by Molmil
Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-13
公開日2024-03-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8PKL
DownloadVisualize
BU of 8pkl by Molmil
Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-26
公開日2024-03-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
6GZ2
DownloadVisualize
BU of 6gz2 by Molmil
Crystal Structure of the LeuO Effector Binding Domain
分子名称: HTH-type transcriptional regulator LeuO, MALONATE ION
著者Fragel, S, Montada, A.M, Baumann, U, Schacherl, M, Schnetz, K.
登録日2018-07-02
公開日2019-06-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Characterization of the pleiotropic LysR-type transcription regulator LeuO of Escherichia coli.
Nucleic Acids Res., 47, 2019
6GZ1
DownloadVisualize
BU of 6gz1 by Molmil
Crystal Structure of the LeuO Effector Binding Domain
分子名称: HTH-type transcriptional regulator LeuO, SULFATE ION
著者Fragel, S, Montada, A.M, Baumann, U, Schacherl, M, Schnetz, K.
登録日2018-07-02
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Characterization of the pleiotropic LysR-type transcription regulator LeuO of Escherichia coli.
Nucleic Acids Res., 47, 2019
6GZ0
DownloadVisualize
BU of 6gz0 by Molmil
Crystal Structure of the LeuO Effector Binding Domain
分子名称: CHLORIDE ION, HTH-type transcriptional regulator LeuO, SULFATE ION
著者Fragel, S, Montada, A.M, Baumann, U, Schacherl, M, Schnetz, K.
登録日2018-07-02
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Characterization of the pleiotropic LysR-type transcription regulator LeuO of Escherichia coli.
Nucleic Acids Res., 47, 2019
5FYQ
DownloadVisualize
BU of 5fyq by Molmil
Sirt2 in complex with a 13-mer trifluoroacetylated Ran peptide
分子名称: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2, RAN AA 31-43, SULFATE ION, ...
著者Knyphausen, P, de Boor, S, Scislowski, L, Extra, A, Baldus, L, Schacherl, M, Baumann, U, Neundorf, I, Lammers, M.
登録日2016-03-09
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights Into Lysine-Deacetylation of Natively Folded Substrate Proteins by Sirtuins.
J.Biol.Chem., 291, 2016
5FR2
DownloadVisualize
BU of 5fr2 by Molmil
Farnesylated RhoA-GDP in complex with RhoGDI-alpha, lysine acetylated at K178
分子名称: FARNESYL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Kuhlmann, N, Wroblowski, S, Knyphausen, P, de Boor, S, Brenig, J, Zienert, A.Y, Meyer-Teschendorf, K, Praefcke, G.J.K, Nolte, H, Krueger, M, Schacherl, M, Baumann, U, James, L.C, Chin, J.W, Lammers, M.
登録日2015-12-15
公開日2016-01-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structural and Mechanistic Insights Into the Regulation of the Fundamental Rho-Regulator Rhogdi Alpha by Lysine Acetylation.
J.Biol.Chem., 291, 2016
8RCT
DownloadVisualize
BU of 8rct by Molmil
Escherichia coli paused disome complex (Rotated disome interface class 2)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-07
公開日2024-03-06
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (5.32 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8RCS
DownloadVisualize
BU of 8rcs by Molmil
Escherichia coli paused disome complex (Rotated disome interface class 1)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-07
公開日2024-03-06
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (4.46 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8RCM
DownloadVisualize
BU of 8rcm by Molmil
Escherichia coli paused disome complex (Non-rotated disome interface class 2)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-06
公開日2024-03-06
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8RCL
DownloadVisualize
BU of 8rcl by Molmil
Escherichia coli paused disome complex (Non-rotated disome interface class 1)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-12-06
公開日2024-03-13
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024

 

12>

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon