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PDB: 116 results

3POQ
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BU of 3poq by Molmil
Crystal structure of E.coli OmpF porin in lipidic cubic phase: space group H32, small unit cell
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OmpF protein, THIOCYANATE ION
Authors:Efremov, R.G, Sazanov, L.A.
Deposit date:2010-11-23
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Escherichia coli OmpF porin from lipidic mesophase.
J.Struct.Biol., 178, 2012
3POX
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BU of 3pox by Molmil
Crystal Structure of E.coli OmpF porin in lipidic cubic phase: space group P1
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OmpF protein, POTASSIUM ION, ...
Authors:Efremov, R.G, Sazanov, L.A.
Deposit date:2010-11-23
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Escherichia coli OmpF porin from lipidic mesophase.
J.Struct.Biol., 178, 2012
3POU
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BU of 3pou by Molmil
Crystal structure of E.coli OmpF porin in lipidic cubic phase: space group H32, large unit cell
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OmpF protein
Authors:Efremov, R.G, Sazanov, L.A.
Deposit date:2010-11-23
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Escherichia coli OmpF porin from lipidic mesophase.
J.Struct.Biol., 178, 2012
7Z7T
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BU of 7z7t by Molmil
Complex I from E. coli, LMNG-purified, under Turnover at pH 6, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-16
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7Z7S
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BU of 7z7s by Molmil
Complex I from E. coli, LMNG-purified, under Turnover at pH 6, Closed state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-16
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7Z7V
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BU of 7z7v by Molmil
Complex I from E. coli, LMNG-purified, under Turnover at pH 6, Open-ready state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-16
Release date:2022-09-21
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7Z7R
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BU of 7z7r by Molmil
Complex I from E. coli, LMNG-purified, Apo, Open-ready state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-16
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7ZCI
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BU of 7zci by Molmil
Complex I from E. coli, LMNG-purified, under Turnover at pH 6, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-28
Release date:2022-09-21
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7Z83
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BU of 7z83 by Molmil
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 8, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-16
Release date:2022-09-21
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7ZC5
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BU of 7zc5 by Molmil
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 8, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-25
Release date:2022-09-21
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7Z84
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BU of 7z84 by Molmil
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 8, Open-ready state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-16
Release date:2022-09-21
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
7Z80
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BU of 7z80 by Molmil
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 8, Closed state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2022-03-16
Release date:2022-09-21
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
6QUM
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BU of 6qum by Molmil
Thermus thermophilus V/A-type ATPase/synthase, rotational state 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, V-type ATP synthase alpha chain, ...
Authors:Zhou, L, Sazanov, L.
Deposit date:2019-02-27
Release date:2019-08-28
Last modified:2020-09-30
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Structure and conformational plasticity of the intact Thermus thermophilus V/A-type ATPase.
Science, 365, 2019
8ASL
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BU of 8asl by Molmil
RCII/PSI complex, class 2
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (3'R)-3'-hydroxy-beta,beta-caroten-4-one, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Zhao, Z, Vercellino, I, Knoppova, J, Sobotka, R, Murray, J.W, Nixon, P.J, Sazanov, L.A, Komenda, J.
Deposit date:2022-08-19
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis.
Nat Commun, 14, 2023
8ASP
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BU of 8asp by Molmil
RCII/PSI complex, focused refinement of PSI
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (3'R)-3'-hydroxy-beta,beta-caroten-4-one, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Zhao, Z, Vercellino, I, Knoppova, J, Sobotka, R, Murray, J.W, Nixon, P.J, Sazanov, L.A, Komenda, J.
Deposit date:2022-08-20
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis.
Nat Commun, 14, 2023
8AM5
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BU of 8am5 by Molmil
RCII/PSI complex, class 3
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (3'R)-3'-hydroxy-beta,beta-caroten-4-one, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Zhao, Z, Vercellino, I, Knoppova, J, Sobotka, R, Murray, J.W, Nixon, P.J, Sazanov, L.A, Komenda, J.
Deposit date:2022-08-02
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis.
Nat Commun, 14, 2023
7ZDJ
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BU of 7zdj by Molmil
Complex I from Ovis aries at pH5.5, Open state
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Acyl carrier protein, Complex I subunit B13, ...
Authors:Petrova, O, Sazanov, L.
Deposit date:2022-03-29
Release date:2022-09-21
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
6Q8X
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BU of 6q8x by Molmil
Respiratory complex I from Thermus thermophilus with bound Pyridaben.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2018-12-16
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.508 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6Q8O
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BU of 6q8o by Molmil
Respiratory complex I from Thermus thermophilus with bound Piericidin A
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2018-12-15
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.605 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6Q8W
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BU of 6q8w by Molmil
Respiratory complex I from Thermus thermophilus with bound Aureothin.
Descriptor: Aureothin, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2018-12-16
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6Y11
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BU of 6y11 by Molmil
Respiratory complex I from Thermus thermophilus
Descriptor: DUF3197 domain-containing protein, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2020-02-10
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.109 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6ZKL
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BU of 6zkl by Molmil
Complex I inhibited by rotenone, open1
Descriptor: (2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrofuro[2',3':7,8][1]benzopyrano[2,3-c][1]benzopyran-6(6aH)-one, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
6ZKA
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BU of 6zka by Molmil
Membrane domain of open complex I during turnover
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
6ZKP
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BU of 6zkp by Molmil
Native complex I, open1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE MONOPHOSPHATE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
6ZA9
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BU of 6za9 by Molmil
Fo domain of Ovine ATP synthase
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit C1, mitochondrial, ...
Authors:Pinke, G, Zhou, L, Sazanov, L.A.
Deposit date:2020-06-05
Release date:2020-09-23
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Cryo-EM structure of the entire mammalian F-type ATP synthase.
Nat.Struct.Mol.Biol., 27, 2020

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