8P5F
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8p5f by Molmil](/molmil-images/mine/8p5f) | Human wild-type GAPDH,orthorhombic form | Descriptor: | ACETATE ION, Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... | Authors: | Samygina, V.R, Muronetz, V.I, Schmalhausen, E.V. | Deposit date: | 2023-05-24 | Release date: | 2023-07-05 | Last modified: | 2023-07-12 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | S-nitrosylation and S-glutathionylation of GAPDH: Similarities, differences, and relationships. Biochim Biophys Acta Gen Subj, 1867, 2023
|
|
8ARM
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8arm by Molmil](/molmil-images/mine/8arm) | Crystal structure of LSSmScarlet2 | Descriptor: | LSSmScarlet2, SULFATE ION | Authors: | Samygina, V.R, Subach, O.M, Vlaskina, A.V, Subach, F.V. | Deposit date: | 2022-08-17 | Release date: | 2022-11-02 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (1.41 Å) | Cite: | LSSmScarlet2 and LSSmScarlet3, Chemically Stable Genetically Encoded Red Fluorescent Proteins with a Large Stokes' Shift. Int J Mol Sci, 23, 2022
|
|
2AU8
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2au8 by Molmil](/molmil-images/mine/2au8) | Catalytic intermediate structure of inorganic pyrophosphatase | Descriptor: | CHLORIDE ION, Inorganic pyrophosphatase, MANGANESE (II) ION, ... | Authors: | Samygina, V.R, Popov, A.N, Avaeva, S.M, Bartunik, H.D. | Deposit date: | 2005-08-27 | Release date: | 2006-08-29 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies J.Mol.Biol., 366, 2007
|
|
4GH0
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4gh0 by Molmil](/molmil-images/mine/4gh0) | Crystal structure of D48V mutant of human GLTP bound with 12:0 monosulfatide | Descriptor: | Glycolipid transfer protein, N-{(2S,3R,4E)-3-hydroxy-1-[(3-O-sulfo-beta-D-galactopyranosyl)oxy]octadec-4-en-2-yl}dodecanamide, PENTADECANE | Authors: | Samygina, V.R, Cabo-Bilbao, A, Ochoa-Lizarralde, B, Popov, A.N, Malinina, L. | Deposit date: | 2012-08-07 | Release date: | 2013-04-10 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Structural insights into lipid-dependent reversible dimerization of human GLTP. Acta Crystallogr.,Sect.D, 69, 2013
|
|
6FVH
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6fvh by Molmil](/molmil-images/mine/6fvh) | |
6FVE
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6fve by Molmil](/molmil-images/mine/6fve) | |
5N4L
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5n4l by Molmil](/molmil-images/mine/5n4l) | Rat ceruloplasmin trigonal form | Descriptor: | CALCIUM ION, COPPER (II) ION, Ceruloplasmin, ... | Authors: | Samygina, V.R, Sokolov, A.V, Bourenkov, G, Vasilyev, V.B. | Deposit date: | 2017-02-11 | Release date: | 2017-12-13 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Rat ceruloplasmin: a new labile copper binding site and zinc/copper mosaic. Metallomics, 9, 2017
|
|
5N0K
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5n0k by Molmil](/molmil-images/mine/5n0k) | Rat ceruloplasmin orthorhombic form | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COPPER (II) ION, ... | Authors: | Samygina, V.R, Sokolov, A.V, Bourenkov, G, Vasilyev, V.B. | Deposit date: | 2017-02-03 | Release date: | 2017-12-13 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Rat ceruloplasmin: a new labile copper binding site and zinc/copper mosaic. Metallomics, 9, 2017
|
|
8QBJ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8qbj by Molmil](/molmil-images/mine/8qbj) | Structure of mBaoJin at pH 4.6 | Descriptor: | CHLORIDE ION, mBaoJin | Authors: | Samygina, V.R, Vlaskina, A.V, Gabdulkhakov, A, Subach, O.M, Subach, F.V. | Deposit date: | 2023-08-24 | Release date: | 2023-12-27 | Last modified: | 2024-04-24 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Bright and stable monomeric green fluorescent protein derived from StayGold. Nat.Methods, 21, 2024
|
|
8QDD
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8qdd by Molmil](/molmil-images/mine/8qdd) | Structure of mBaoJin at pH 8.5 | Descriptor: | CHLORIDE ION, SULFATE ION, mBaoJin | Authors: | Samygina, V.R, Vlaskina, A.V, Gabdulkhakov, A, Subach, O.M, Subach, F.V. | Deposit date: | 2023-08-28 | Release date: | 2023-12-27 | Last modified: | 2024-04-24 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Bright and stable monomeric green fluorescent protein derived from StayGold. Nat.Methods, 21, 2024
|
|
8Q79
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8q79 by Molmil](/molmil-images/mine/8q79) | Structure of mBaoJin at pH 6.5 | Descriptor: | CHLORIDE ION, mBaoJin | Authors: | Samygina, V.R, Subach, O.M, Vlaskina, A.V, Nikolaeva, A.Y, Borshchevsky, V, Qin, W, Subach, F.V. | Deposit date: | 2023-08-15 | Release date: | 2023-12-27 | Last modified: | 2024-04-24 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Bright and stable monomeric green fluorescent protein derived from StayGold. Nat.Methods, 21, 2024
|
|
1I40
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1i40 by Molmil](/molmil-images/mine/1i40) | STRUCTURE OF INORGANIC PYROPHOSPHATASE | Descriptor: | CALCIUM ION, CHLORIDE ION, INORGANIC PYROPHOSPHATASE, ... | Authors: | Samygina, V.R, Popov, A.N, Lamzin, V.S, Avaeva, S.M. | Deposit date: | 2001-02-19 | Release date: | 2001-12-05 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.1 Å) | Cite: | The structures of Escherichia coli inorganic pyrophosphatase complexed with Ca(2+) or CaPP(i) at atomic resolution and their mechanistic implications. J.Mol.Biol., 314, 2001
|
|
1I6T
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1i6t by Molmil](/molmil-images/mine/1i6t) | STRUCTURE OF INORGANIC PYROPHOSPHATASE | Descriptor: | CALCIUM ION, CHLORIDE ION, INORGANIC PYROPHOSPHATASE, ... | Authors: | Samygina, V.R, Popov, A.N, Lamzin, V.S, Avaeva, S.M. | Deposit date: | 2001-03-05 | Release date: | 2001-12-05 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | The structures of Escherichia coli inorganic pyrophosphatase complexed with Ca(2+) or CaPP(i) at atomic resolution and their mechanistic implications. J.Mol.Biol., 314, 2001
|
|
7QFC
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7qfc by Molmil](/molmil-images/mine/7qfc) | Crystal structure of cytotoxin 13 from Naja naja, orthorhombic form | Descriptor: | Cytotoxin 13 | Authors: | Samygina, V.R, Dubova, K.M, Bourenkov, G, Utkin, Y.N, Dubovskii, P.V. | Deposit date: | 2021-12-05 | Release date: | 2022-04-27 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Variability in the Spatial Structure of the Central Loop in Cobra Cytotoxins Revealed by X-ray Analysis and Molecular Modeling. Toxins, 14, 2022
|
|
7QHI
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7qhi by Molmil](/molmil-images/mine/7qhi) | Crystal structure of cytotoxin 13 from Naja naja, hexagonal form | Descriptor: | Cytotoxin 13 | Authors: | Samygina, V.R, Dubova, K.M, Bourenkov, G, Utkin, Y.N, Dubovskii, P.V. | Deposit date: | 2021-12-12 | Release date: | 2022-04-27 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.302 Å) | Cite: | Variability in the Spatial Structure of the Central Loop in Cobra Cytotoxins Revealed by X-ray Analysis and Molecular Modeling. Toxins, 14, 2022
|
|
4GVT
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4gvt by Molmil](/molmil-images/mine/4gvt) | Crystal structure of D48V mutant of human GLTP bound with 12:0 disulfatide (hexagonal form) | Descriptor: | Glycolipid transfer protein, N-{(2S,3R,4E)-1-[(3,6-di-O-sulfo-beta-D-galactopyranosyl)oxy]-3-hydroxyoctadec-4-en-2-yl}dodecanamide | Authors: | Samygina, V.R, Cabo-Bilbao, A, Goni-de-Cerio, F, Popov, A.N, Malinina, L. | Deposit date: | 2012-08-31 | Release date: | 2013-04-10 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural insights into lipid-dependent reversible dimerization of human GLTP. Acta Crystallogr.,Sect.D, 69, 2013
|
|
4GXG
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4gxg by Molmil](/molmil-images/mine/4gxg) | Crystal structure of human GLTP bound with 12:0 monosulfatide (orthorhombic form; four subunits in asymmetric unit) | Descriptor: | Glycolipid transfer protein, N-{(2S,3R,4E)-3-hydroxy-1-[(3-O-sulfo-beta-D-galactopyranosyl)oxy]octadec-4-en-2-yl}dodecanamide | Authors: | Samygina, V.R, Cabo-Bilbao, A, Goni-de-Cerio, F, Popov, A.N, Malinina, L. | Deposit date: | 2012-09-04 | Release date: | 2013-04-10 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural insights into lipid-dependent reversible dimerization of human GLTP. Acta Crystallogr.,Sect.D, 69, 2013
|
|
4GXD
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4gxd by Molmil](/molmil-images/mine/4gxd) | Crystal structure of D48V mutant of human GLTP bound with 12:0 disulfatide | Descriptor: | Glycolipid transfer protein, N-{(2S,3R,4E)-1-[(3,6-di-O-sulfo-beta-D-galactopyranosyl)oxy]-3-hydroxyoctadec-4-en-2-yl}dodecanamide | Authors: | Samygina, V.R, Ochoa-Lizarralde, B, Popov, A.N, Malinina, L. | Deposit date: | 2012-09-04 | Release date: | 2013-04-10 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural insights into lipid-dependent reversible dimerization of human GLTP. Acta Crystallogr.,Sect.D, 69, 2013
|
|
4H2Z
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4h2z by Molmil](/molmil-images/mine/4h2z) | Crystal structure of human GLTP bound with 12:0 monosulfatide | Descriptor: | Glycolipid transfer protein, N-{(2S,3R,4E)-3-hydroxy-1-[(3-O-sulfo-beta-D-galactopyranosyl)oxy]octadec-4-en-2-yl}dodecanamide, PENTADECANE, ... | Authors: | Samygina, V.R, Ochoa-Lizarralde, B, Malinina, L. | Deposit date: | 2012-09-13 | Release date: | 2013-04-10 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Structural insights into lipid-dependent reversible dimerization of human GLTP. Acta Crystallogr.,Sect.D, 69, 2013
|
|
2AU7
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2au7 by Molmil](/molmil-images/mine/2au7) | The R43Q active site variant of E.coli inorganic pyrophosphatase | Descriptor: | CHLORIDE ION, Inorganic pyrophosphatase, MANGANESE (II) ION, ... | Authors: | Samygina, V.R, Avaeva, S.M, Bartunik, H.D. | Deposit date: | 2005-08-27 | Release date: | 2006-08-29 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.05 Å) | Cite: | Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies J.Mol.Biol., 366, 2007
|
|
2AUU
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2auu by Molmil](/molmil-images/mine/2auu) | Inorganic pyrophosphatase complexed with magnesium pyrophosphate and fluoride | Descriptor: | CHLORIDE ION, FLUORIDE ION, MAGNESIUM ION, ... | Authors: | Samygina, V.R, Popov, A.N, Avaeva, S.M, Bartunik, H.D. | Deposit date: | 2005-08-29 | Release date: | 2006-08-29 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.22 Å) | Cite: | Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies J.Mol.Biol., 366, 2007
|
|
2AU9
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2au9 by Molmil](/molmil-images/mine/2au9) | Inorganic pyrophosphatase complexed with substrate | Descriptor: | CHLORIDE ION, FLUORIDE ION, Inorganic pyrophosphatase, ... | Authors: | Samygina, V.R, Popov, A.N, Avaeva, S.M, Bartunik, H.D. | Deposit date: | 2005-08-27 | Release date: | 2006-08-29 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies J.Mol.Biol., 366, 2007
|
|
2AU6
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2au6 by Molmil](/molmil-images/mine/2au6) | Crystal structure of catalytic intermediate of inorganic pyrophosphatase | Descriptor: | CHLORIDE ION, FLUORIDE ION, Inorganic pyrophosphatase, ... | Authors: | Samygina, V.R, Popov, A.N, Avaeva, S.M, Bartunik, H.D. | Deposit date: | 2005-08-27 | Release date: | 2006-08-29 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies J.Mol.Biol., 366, 2007
|
|
4EJX
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4ejx by Molmil](/molmil-images/mine/4ejx) | Structure of ceruloplasmin-myeloperoxidase complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Ceruloplasmin, ... | Authors: | Samygina, V.R, Sokolov, A.V, Bourenkov, G, Vasilyev, V.B, Bartunik, H. | Deposit date: | 2012-04-07 | Release date: | 2013-04-10 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (4.69 Å) | Cite: | Ceruloplasmin: macromolecular assemblies with iron-containing acute phase proteins. Plos One, 8, 2013
|
|
4ENZ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 4enz by Molmil](/molmil-images/mine/4enz) | Structure of human ceruloplasmin at 2.6 A resolution | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COPPER (II) ION, ... | Authors: | Samygina, V.R, Sokolov, A.V, Bourenkov, G, Vasilyev, V.B, Bartunik, H. | Deposit date: | 2012-04-13 | Release date: | 2013-04-17 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Ceruloplasmin: macromolecular assemblies with iron-containing acute phase proteins. Plos One, 8, 2013
|
|