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PDB: 43 results

1CDH
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BU of 1cdh by Molmil
STRUCTURES OF AN HIV AND MHC BINDING FRAGMENT FROM HUMAN CD4 AS REFINED IN TWO CRYSTAL LATTICES
Descriptor: T CELL SURFACE GLYCOPROTEIN CD4
Authors:Ryu, S.E, Truneh, A, Sweet, R.W, Hendrickson, W.A.
Deposit date:1994-01-26
Release date:1994-04-30
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of an HIV and MHC binding fragment from human CD4 as refined in two crystal lattices.
Structure, 2, 1994
1CDI
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BU of 1cdi by Molmil
STRUCTURES OF AN HIV AND MHC BINDING FRAGMENT FROM HUMAN CD4 AS REFINED IN TWO CRYSTAL LATTICES
Descriptor: T CELL SURFACE GLYCOPROTEIN CD4
Authors:Ryu, S.E, Truneh, A, Sweet, R.W, Hendrickson, W.A.
Deposit date:1994-01-26
Release date:1994-04-30
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of an HIV and MHC binding fragment from human CD4 as refined in two crystal lattices.
Structure, 2, 1994
7DGR
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BU of 7dgr by Molmil
Activity optimized supercomplex state2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
3M7M
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BU of 3m7m by Molmil
Crystal structure of monomeric hsp33
Descriptor: 33 kDa chaperonin
Authors:Chi, S.W, Jeong, D.G, Woo, J.R, Park, B.C, Ryu, S.E, Kim, S.J.
Deposit date:2010-03-16
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of monomeric hsp33
To be Published
2G6Z
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BU of 2g6z by Molmil
Crystal structure of human DUSP5
Descriptor: Dual specificity protein phosphatase 5, SULFATE ION
Authors:Kim, S.J, Ryu, S.E.
Deposit date:2006-02-26
Release date:2007-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the catalytic domain of human DUSP5, a dual specificity MAP kinase protein phosphatase
Proteins, 66, 2007
8H5A
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BU of 8h5a by Molmil
Crystal structure of YhaJ effector binding domain (ligand-bound)
Descriptor: 2-methylbenzene-1,4-diol, HTH-type transcriptional regulator YhaJ, SODIUM ION
Authors:Kim, M, Ryu, S.E.
Deposit date:2022-10-12
Release date:2023-10-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Structural basis of transcription factor YhaJ for DNT detection.
Iscience, 26, 2023
8H58
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Crystal structure of YhaJ effector binding domain
Descriptor: HTH-type transcriptional regulator YhaJ, SODIUM ION
Authors:Kim, M, Ryu, S.E.
Deposit date:2022-10-12
Release date:2023-10-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.639 Å)
Cite:Structural basis of transcription factor YhaJ for DNT detection.
Iscience, 26, 2023
4BPC
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BU of 4bpc by Molmil
Structure of the Catalytic Domain of Protein Tyrosine Phosphatase Sigma in the Sulfenic Acid Form
Descriptor: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE S
Authors:Jeon, T.J, Chien, P.N, Chun, H.J, Ryu, S.E.
Deposit date:2013-05-24
Release date:2013-07-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the Catalytic Domain of Protein Tyrosine Phosphatase Sigma in the Sulfenic Acid Form
Mol.Cells, 36, 2013
7DGQ
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BU of 7dgq by Molmil
Activity optimized supercomplex state1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (5 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGZ
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BU of 7dgz by Molmil
Activity optimized complex I (closed form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DKF
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BU of 7dkf by Molmil
Activity optimized supercomplex state4
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-24
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DH0
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BU of 7dh0 by Molmil
Activity optimized complex I (open form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGS
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BU of 7dgs by Molmil
Activity optimized supercomplex state3
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
5Y15
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BU of 5y15 by Molmil
Crystal structure of human DUSP28
Descriptor: Dual specificity phosphatase 28, PHOSPHATE ION
Authors:Ku, B, Hong, W, Kim, S.J, Ryu, S.E.
Deposit date:2017-07-19
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical analysis of atypically low dephosphorylating activity of human dual-specificity phosphatase 28
PLoS ONE, 12, 2017
5Y16
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BU of 5y16 by Molmil
Crystal structure of human DUSP28(Y102H)
Descriptor: CHLORIDE ION, Dual specificity phosphatase 28, PHOSPHATE ION
Authors:Ku, B, Kim, M, Kim, S.J, Ryu, S.E.
Deposit date:2017-07-19
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural and biochemical analysis of atypically low dephosphorylating activity of human dual-specificity phosphatase 28
PLoS ONE, 12, 2017
7XC0
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BU of 7xc0 by Molmil
Crystal structure of Human RPTPH
Descriptor: PHOSPHATE ION, Receptor-type tyrosine-protein phosphatase H
Authors:Kim, M, Ryu, S.E.
Deposit date:2022-03-22
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal structure of the catalytic domain of human RPTPH.
Acta Crystallogr.,Sect.F, 78, 2022
1NM3
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BU of 1nm3 by Molmil
Crystal structure of Heamophilus influenza hybrid-Prx5
Descriptor: Protein HI0572, SULFATE ION
Authors:Kim, S.J, Woo, J.R, Hwang, Y.S, Jeong, D.G, Shin, D.H, Kim, K.H, Ryu, S.E.
Deposit date:2003-01-08
Release date:2003-03-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Tetrameric Structure of Haemophilus influenza Hybrid Prx5 Reveals Interactions between Electron Donor and Acceptor Proteins.
J.Biol.Chem., 278, 2003
2ESB
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BU of 2esb by Molmil
Crystal structure of human DUSP18
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, Dual specificity protein phosphatase 18
Authors:Kim, S.J, Ryu, S.E, Jeong, D.G, Cho, Y.H, Yoon, T.S, Kim, J.H.
Deposit date:2005-10-25
Release date:2006-06-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of human DSP18, a member of the dual-specificity protein tyrosine phosphatase family.
Acta Crystallogr.,Sect.D, 62, 2006
7E73
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BU of 7e73 by Molmil
Crystal structure of human ERK2 mutant (Y36H)
Descriptor: Mitogen-activated protein kinase 1, SULFATE ION
Authors:Park, Y.S, Kim, M, Ryu, S.E.
Deposit date:2021-02-25
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural mechanism of inhibitor-resistance by ERK2 mutations
Biodesign, 9, 2021
7E75
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BU of 7e75 by Molmil
Crystal structure of human ERK2 mutant (G37C)
Descriptor: Mitogen-activated protein kinase 1
Authors:Park, Y.S, Kim, M, Ryu, S.E.
Deposit date:2021-02-25
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.481 Å)
Cite:Structural mechanism of inhibitor-resistance by ERK2 mutations
Biodesign, 9, 2021
2V7C
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BU of 2v7c by Molmil
Crystal Structure of Rev-Erb beta
Descriptor: ORPHAN NUCLEAR RECEPTOR NR1D2
Authors:Woo, E.-J, Jeong, D.G, Lim, M.-Y, Kim, S.J, Ryu, S.E.
Deposit date:2007-07-29
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insight Into the Constitutive Repression Function of the Nuclear Receptor Rev-Erbbeta
J.Mol.Biol., 373, 2007
5XJV
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BU of 5xjv by Molmil
Two intermediate states of conformation switch in dual specificity phosphatase 13a
Descriptor: Dual specificity protein phosphatase 13 isoform A, PHOSPHATE ION
Authors:Wei, C.H, Min, H.G, Chun, H.J, Ryu, S.E.
Deposit date:2017-05-04
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Two intermediate states of the conformational switch in dual specificity phosphatase 13a
Pharmacol. Res., 128, 2018
3S4E
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BU of 3s4e by Molmil
Crystal Structrue of a Novel Mitogen-activated Protein Kinase Phosphatase, SKRP1
Descriptor: Dual specificity protein phosphatase 19, PHOSPHATE ION, SULFATE ION
Authors:Wei, C.H, Ryu, S.Y, Jeon, Y.H, Jeong, D.G, Kim, S.J, Ryu, S.E.
Deposit date:2011-05-19
Release date:2012-04-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structure of a novel mitogen-activated protein kinase phosphatase, SKRP1.
Proteins, 79, 2011
3LJ8
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BU of 3lj8 by Molmil
Crystal Structure of MKP-4
Descriptor: Tyrosine-protein phosphatase
Authors:Jeong, D.G, Yoon, T.S, Jung, S.-K, Park, H.S, Ryu, S.E, Kim, S.J.
Deposit date:2010-01-26
Release date:2010-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Exploring binding sites other than the catalytic core in the crystal structure of the catalytic domain of MKP-4
Acta Crystallogr.,Sect.D, 67, 2011
1UC7
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BU of 1uc7 by Molmil
Crystal structure of DsbDgamma
Descriptor: Thiol:disulfide interchange protein dsbD
Authors:Kim, J.H, Kim, S.J, Jeong, D.G, Son, J.H, Ryu, S.E.
Deposit date:2003-04-09
Release date:2004-04-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of DsbDgamma reveals the mechanism of redox potential shift and substrate specificity(1)
FEBS LETT., 543, 2003

 

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