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PDB: 30 results

6D1O
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FT_5 dioxygenase apoenzyme
Descriptor: (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase
Authors:Rydel, T.J, Halls, C.E.
Deposit date:2018-04-12
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
3CPR
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BU of 3cpr by Molmil
The crystal structure of Corynebacterium glutamicum dihydrodipicolinate synthase to 2.2 A resolution
Descriptor: Dihydrodipicolinate synthetase
Authors:Rydel, T.J, Sturman, E.J, Rice, E.A.
Deposit date:2008-04-01
Release date:2008-11-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization and crystal structure of lysine insensitive Corynebacterium glutamicum dihydrodipicolinate synthase (cDHDPS) protein.
Arch.Biochem.Biophys., 480, 2008
8ETN
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BU of 8etn by Molmil
The X-ray Crystal Structure of Tri-Ketone Dioxygenase from Rice
Descriptor: Tri-Ketone Dioxygenase
Authors:Rydel, T.J, Duda, D, Zheng, M, Duff, S.M.G.
Deposit date:2022-10-17
Release date:2023-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Structural and functional characterization of triketone dioxygenase from Oryza Sativa.
Biochim Biophys Acta Gen Subj, 1868, 2023
3TCM
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BU of 3tcm by Molmil
Crystal Structure of Alanine Aminotransferase from Hordeum vulgare
Descriptor: Alanine aminotransferase 2, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
Authors:Rydel, T.J, Sturman, E.J, Halls, C, Chen, S, Zeng, J, Evdokimov, A, Duff, S.M.G.
Deposit date:2011-08-09
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:The Enzymology of alanine aminotransferase (AlaAT) isoforms from Hordeum vulgare and other organisms, and the HvAlaAT crystal structure.
Arch.Biochem.Biophys., 528, 2012
4RHZ
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BU of 4rhz by Molmil
Crystal structure of Cry23Aa1 and Cry37Aa1 binary protein complex
Descriptor: CALCIUM ION, Cry23AA1, Cry37AA1, ...
Authors:Rydel, T.J, Williams, J.M, Brown, G.R, Guzov, V.M, Sturman, E.J, Evdokimov, A.
Deposit date:2014-10-03
Release date:2015-10-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Associated Bacillus thuringiensis Binary Protein Complex of Cry23Aa1 and Cry37Aa1: Crystal Structure, Insecticidal Data, and Pore Formation Modeling.
To be Published
6OVB
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BU of 6ovb by Molmil
Crystal structure of a Bacillus thuringiensis Cry1Da tryptic core variant
Descriptor: Active core crystal toxin protein 1D
Authors:Rydel, T.J, Halls, C, Evdokimov, A.G, Beishir, S.C.
Deposit date:2019-05-07
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.611 Å)
Cite:Bacillus thuringiensis Cry1Da_7 and Cry1B.868 Protein Interactions with Novel Receptors Allow Control of Resistant Fall Armyworms, Spodoptera frugiperda (J.E. Smith).
Appl.Environ.Microbiol., 85, 2019
6OWK
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BU of 6owk by Molmil
Crystal structure of a Bacillus thuringiensis Cry1B.867 tryptic core variant
Descriptor: Pesticidal crystal protein Cry1Be, Cry1K-like protein chimera
Authors:Rydel, T.J, Evdokimov, A, Beishir, S.C.
Deposit date:2019-05-10
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.698 Å)
Cite:Bacillus thuringiensis Cry1Da_7 and Cry1B.868 Protein Interactions with Novel Receptors Allow Control of Resistant Fall Armyworms, Spodoptera frugiperda (J.E. Smith).
Appl.Environ.Microbiol., 85, 2019
5HD2
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BU of 5hd2 by Molmil
The crystal structure of SeMet-Cry51Aa2-L11M
Descriptor: Parasporal crystal protein
Authors:Rydel, T.J, Sturman, E.J, Moshiri, F.
Deposit date:2016-01-04
Release date:2016-07-20
Last modified:2016-08-03
Method:X-RAY DIFFRACTION (2.276 Å)
Cite:A transgenic approach for controlling Lygus in cotton.
Nat Commun, 7, 2016
6VSH
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BU of 6vsh by Molmil
Crystal structure of apo Dicamba Monooxygenase
Descriptor: Dicamba O-demethylase, oxygenase component, FE2/S2 (INORGANIC) CLUSTER
Authors:Rydel, T.J.
Deposit date:2020-02-11
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Dicamba monooxygenase: structural insights into a dynamic Rieske oxygenase that catalyzes an exocyclic monooxygenation.
J. Mol. Biol., 392, 2009
6WPC
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Crystal structure of Bacillus thuringiensis Cry1A.2 tryptic core variant
Descriptor: Cry1A.2
Authors:Rydel, T.J, Evdokimov, A.
Deposit date:2020-04-27
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Bacillus thuringiensis chimeric proteins Cry1A.2 and Cry1B.2 to control soybean lepidopteran pests: New domain combinations enhance insecticidal spectrum of activity and novel receptor contributions.
Plos One, 16, 2021
3GB4
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BU of 3gb4 by Molmil
Crystal Structure of Dicamba Monooxygenase with Non-heme Cobalt and Dicamba
Descriptor: 3,6-dichloro-2-methoxybenzoic acid, COBALT (II) ION, DdmC, ...
Authors:Rydel, T.J, Sturman, E.J, Moshiri, F, Brown, G.R, Qi, Y.
Deposit date:2009-02-18
Release date:2009-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dicamba monooxygenase: structural insights into a dynamic Rieske oxygenase that catalyzes an exocyclic monooxygenation.
J.Mol.Biol., 392, 2009
7MJR
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BU of 7mjr by Molmil
Vip4Da2 toxin structure
Descriptor: CALCIUM ION, SULFATE ION, Vip4Da1 protein
Authors:Rydel, T.J, Duda, D, Zheng, M, Henry, A.
Deposit date:2021-04-20
Release date:2021-05-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Structural and functional insights into the first Bacillus thuringiensis vegetative insecticidal protein of the Vpb4 fold, active against western corn rootworm.
Plos One, 16, 2021
7ML9
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BU of 7ml9 by Molmil
The Mpp75Aa1.1 beta-pore-forming protein from Brevibacillus laterosporus
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Insecticidal protein, ...
Authors:Rydel, T.J, Zheng, M, Evdokimov, A.
Deposit date:2021-04-27
Release date:2021-05-05
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and functional characterization of Mpp75Aa1.1, a putative beta-pore forming protein from Brevibacillus laterosporus active against the western corn rootworm.
Plos One, 16, 2021
3GTE
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BU of 3gte by Molmil
Crystal Structure of Dicamba Monooxygenase with Non-heme Iron
Descriptor: ACETATE ION, DdmC, FE (III) ION, ...
Authors:Rydel, T.J, Sturman, E.J, Moshiri, F, Brown, G.R, Qi, Y.
Deposit date:2009-03-27
Release date:2009-07-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Dicamba monooxygenase: structural insights into a dynamic Rieske oxygenase that catalyzes an exocyclic monooxygenation.
J.Mol.Biol., 392, 2009
3GTS
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BU of 3gts by Molmil
Crystal Structure of Dicamba Monooxygenase with Non-heme Iron and Dicamba
Descriptor: 3,6-dichloro-2-methoxybenzoic acid, DdmC, FE (III) ION, ...
Authors:Rydel, T.J, Sturman, E.J, Moshiri, F, Brown, G.R, Qi, Y.
Deposit date:2009-03-28
Release date:2009-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dicamba monooxygenase: structural insights into a dynamic Rieske oxygenase that catalyzes an exocyclic monooxygenation.
J.Mol.Biol., 392, 2009
3GOB
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BU of 3gob by Molmil
Crystal Structure of Dicamba Monooxygenase with Non-heme Cobalt and DCSA
Descriptor: 3,6-dichloro-2-hydroxybenzoic acid, COBALT (II) ION, DdmC, ...
Authors:Rydel, T.J, Sturman, E.J, Moshiri, F, Brown, G.R, Qi, Y.
Deposit date:2009-03-18
Release date:2009-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dicamba monooxygenase: structural insights into a dynamic Rieske oxygenase that catalyzes an exocyclic monooxygenation.
J.Mol.Biol., 392, 2009
6D3J
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BU of 6d3j by Molmil
FT_T dioxygenase holoenzyme
Descriptor: 2-OXOGLUTARIC ACID, COBALT (II) ION, FT_T dioxygenase
Authors:Rydel, T.J, Halls, C.E.
Deposit date:2018-04-16
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
6D3M
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BU of 6d3m by Molmil
FT_T dioxygenase with bound quizalofop
Descriptor: (2R)-2-{4-[(6-chloroquinoxalin-2-yl)oxy]phenoxy}propanoic acid, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
Authors:Rydel, T.J, Halls, C.E.
Deposit date:2018-04-16
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
6D3I
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BU of 6d3i by Molmil
ftv7 dioxygenase with 2,4-D bound
Descriptor: (2,4-DICHLOROPHENOXY)ACETIC ACID, 2-OXOGLUTARIC ACID, COBALT (II) ION, ...
Authors:Rydel, T.J, Halls, C.E.
Deposit date:2018-04-16
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.196 Å)
Cite:Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
6D3H
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BU of 6d3h by Molmil
FT_T dioxygenase with bound dichlorprop
Descriptor: (2R)-2-(2,4-dichlorophenoxy)propanoic acid, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
Authors:Rydel, T.J, Halls, C.E.
Deposit date:2018-04-16
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
6D0O
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BU of 6d0o by Molmil
rdpA dioxygenase holoenzyme
Descriptor: (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase, 2-OXOGLUTARIC ACID, COBALT (II) ION
Authors:Rydel, T.J, Sturman, E.J, Zheng, M, Evdokimov, A.
Deposit date:2018-04-10
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
6DJ4
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BU of 6dj4 by Molmil
Crystal Structure of Bacillus thuringiensis Cry1A.105 Tryptic Core
Descriptor: Cry1A.105
Authors:Rydel, T.J, Sturman, E.J, Lee, T.C.
Deposit date:2018-05-24
Release date:2018-09-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Safety of the Bacillus thuringiensis-derived Cry1A.105 protein: Evidence that domain exchange preserves mode of action and safety.
Regul. Toxicol. Pharmacol., 99, 2018
1OXW
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BU of 1oxw by Molmil
The Crystal Structure of SeMet Patatin
Descriptor: Patatin
Authors:Rydel, T.J, Williams, J.M, Krieger, E, Moshiri, F, Stallings, W.C, Brown, S.M, Pershing, J.C, Purcell, J.P, Alibhai, M.F.
Deposit date:2003-04-03
Release date:2003-05-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure, Mutagenesis, and Activity Studies Reveal that Patatin Is a Lipid Acyl Hydrolase with a Ser-Asp Catalytic Dyad
Biochemistry, 42, 2003
4HTC
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BU of 4htc by Molmil
THE REFINED STRUCTURE OF THE HIRUDIN-THROMBIN COMPLEX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), ...
Authors:Tulinsky, A, Rydel, T.J, Bode, W, Huber, R.
Deposit date:1993-06-25
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refined structure of the hirudin-thrombin complex.
J.Mol.Biol., 221, 1991
1B3D
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BU of 1b3d by Molmil
STROMELYSIN-1
Descriptor: CALCIUM ION, N-[[2-METHYL-4-HYDROXYCARBAMOYL]BUT-4-YL-N]-BENZYL-P-[PHENYL]-P-[METHYL]PHOSPHINAMID, STROMELYSIN-1, ...
Authors:Chen, L, Rydel, T.J, Dunaway, C.M, Pikul, S, Dunham, K.M, Gu, F, Barnett, B.L.
Deposit date:1998-12-09
Release date:1999-12-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the stromelysin catalytic domain at 2.0 A resolution: inhibitor-induced conformational changes.
J.Mol.Biol., 293, 1999

 

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