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PDB: 159 件

6VGQ
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ClpP1P2 complex from M. tuberculosis with GLF-CMK bound to ClpP1
分子名称: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, Z-Gly-leu-phe-CH2Cl
著者Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
登録日2020-01-08
公開日2020-03-18
最終更新日2020-04-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VGK
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ClpP1P2 complex from M. tuberculosis
分子名称: ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2
著者Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
登録日2020-01-08
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VFX
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ClpXP from Neisseria meningitidis - Conformation B
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
著者Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
登録日2020-01-06
公開日2020-01-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VFS
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BU of 6vfs by Molmil
ClpXP from Neisseria meningitidis - Conformation A
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
著者Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
登録日2020-01-06
公開日2020-01-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VE2
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BU of 6ve2 by Molmil
Tetradecameric PilQ bound by TsaP heptamer from Pseudomonas aeruginosa
分子名称: Fimbrial assembly protein PilQ, LysM domain-containing protein
著者McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
登録日2019-12-28
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
6VGN
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BU of 6vgn by Molmil
ClpP1P2 complex from M. tuberculosis bound to ADEP
分子名称: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, R0M-WFP-ALO-PRO-YCP-ALA-MP8
著者Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
登録日2020-01-08
公開日2020-03-18
最終更新日2020-04-01
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VE3
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BU of 6ve3 by Molmil
Tetradecameric PilQ from Pseudomonas aeruginosa
分子名称: Fimbrial assembly protein PilQ
著者McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
登録日2019-12-28
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
6VQJ
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BU of 6vqj by Molmil
Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 2 (from focused refinement)
分子名称: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-05
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQI
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BU of 6vqi by Molmil
Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 1 (from focused refinement)
分子名称: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-05
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ7
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BU of 6vq7 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 2 bound to ADP and SidK (built from focused refinement models)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQA
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BU of 6vqa by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with SidK and ADP (from focused refinement)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQH
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BU of 6vqh by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 3 (from focused refinement)
分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-05
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ9
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BU of 6vq9 by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 1 with SidK and ADP (from focused refinement)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQB
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BU of 6vqb by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with SidK and ADP (from focused refinement)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ6
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BU of 6vq6 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 1 bound to ADP and SidK (built from focused refinement models)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQC
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BU of 6vqc by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 1 (from focused refinement)
分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQG
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BU of 6vqg by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 2 (from focused refinement)
分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-05
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQK
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BU of 6vqk by Molmil
Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 3 (from focused refinement)
分子名称: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-05
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ8
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BU of 6vq8 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 3 bound to ADP and SidK (built from focused refinement models)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
7RH7
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BU of 7rh7 by Molmil
Mycobacterial CIII2CIV2 supercomplex, Telacebec (Q203) bound
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
著者Di Trani, J.M, Yanofsky, D.J, Rubinstein, J.L.
登録日2021-07-16
公開日2021-08-04
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of mycobacterial CIII 2 CIV 2 respiratory supercomplex bound to the tuberculosis drug candidate telacebec (Q203).
Elife, 10, 2021
7RH5
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BU of 7rh5 by Molmil
Mycobacterial CIII2CIV2 supercomplex, Inhibitor free
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
著者Di Trani, J.M, Yanofsky, D.J, Rubinstein, J.L.
登録日2021-07-16
公開日2021-08-04
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of mycobacterial CIII 2 CIV 2 respiratory supercomplex bound to the tuberculosis drug candidate telacebec (Q203).
Elife, 10, 2021
7RH6
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BU of 7rh6 by Molmil
Mycobacterial CIII2CIV2 supercomplex, inhibitor free, -Lpqe cyt cc open
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
著者Di Trani, J.M, Yanofsky, D.J, Rubinstein, J.L.
登録日2021-07-16
公開日2021-08-04
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of mycobacterial CIII 2 CIV 2 respiratory supercomplex bound to the tuberculosis drug candidate telacebec (Q203).
Elife, 10, 2021
7TAP
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BU of 7tap by Molmil
Cryo-EM structure of archazolid A bound to yeast VO V-ATPase
分子名称: Archazolid A, V-type proton ATPase subunit a, vacuolar isoform, ...
著者Keon, K.A, Rubinstein, J.L, Benlekbir, S, Kirsch, S.H, Muller, R.
登録日2021-12-21
公開日2022-02-23
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM of the Yeast V O Complex Reveals Distinct Binding Sites for Macrolide V-ATPase Inhibitors.
Acs Chem.Biol., 17, 2022
7TAO
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BU of 7tao by Molmil
Cryo-EM structure of bafilomycin A1 bound to yeast VO V-ATPase
分子名称: (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, V-type proton ATPase subunit a, vacuolar isoform, ...
著者Keon, K.A, Rubinstein, J.L, Benlekbir, S, Kirsch, S.H, Muller, R.
登録日2021-12-21
公開日2022-02-23
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM of the Yeast V O Complex Reveals Distinct Binding Sites for Macrolide V-ATPase Inhibitors.
Acs Chem.Biol., 17, 2022
7TMM
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BU of 7tmm by Molmil
Complete V1 Complex from Saccharomyces cerevisiae
分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ...
著者Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
登録日2022-01-19
公開日2022-04-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022

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件を2024-05-15に公開中

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