Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 159 results
5VCA
DownloadVisualize
BU of 5vca by Molmil
VCP like ATPase from T. acidophilum (VAT)-Substrate bound conformation
Descriptor: VCP-like ATPase
Authors:Ripstein, Z.A, Huang, R, Augustyniak, R, Kay, L.E, Rubinstein, J.L.
Deposit date:2017-03-31
Release date:2017-04-26
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of a AAA+ unfoldase in the process of unfolding substrate.
Elife, 6, 2017
7TK7
DownloadVisualize
BU of 7tk7 by Molmil
Yeast ATP synthase State 1catalytic(b) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK8
DownloadVisualize
BU of 7tk8 by Molmil
Yeast ATP synthase State 1catalytic(c) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK0
DownloadVisualize
BU of 7tk0 by Molmil
Yeast ATP synthase State 1catalytic(c) without exogenous ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK6
DownloadVisualize
BU of 7tk6 by Molmil
Yeast ATP synthase State 1catalytic(a) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKA
DownloadVisualize
BU of 7tka by Molmil
Yeast ATP synthase State 1catalytic(e) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK5
DownloadVisualize
BU of 7tk5 by Molmil
Yeast ATP synthase State 1binding(d) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK9
DownloadVisualize
BU of 7tk9 by Molmil
Yeast ATP synthase State 1catalytic(d) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKC
DownloadVisualize
BU of 7tkc by Molmil
Yeast ATP synthase State 1catalytic(g) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKB
DownloadVisualize
BU of 7tkb by Molmil
Yeast ATP synthase State 1catalytic(f) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TJY
DownloadVisualize
BU of 7tjy by Molmil
Yeast ATP synthase State 1catalytic(a) without exogenous ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TJZ
DownloadVisualize
BU of 7tjz by Molmil
Yeast ATP synthase State 1catalytic(b) without exogenous ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK2
DownloadVisualize
BU of 7tk2 by Molmil
Yeast ATP synthase State 1binding(a) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK3
DownloadVisualize
BU of 7tk3 by Molmil
Yeast ATP synthase State 1binding(b) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKE
DownloadVisualize
BU of 7tke by Molmil
Yeast ATP synthase State 2binding(a) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKD
DownloadVisualize
BU of 7tkd by Molmil
Yeast ATP synthase State 1catalytic(h) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK4
DownloadVisualize
BU of 7tk4 by Molmil
Yeast ATP synthase State 1binding(c) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK1
DownloadVisualize
BU of 7tk1 by Molmil
Yeast ATP synthase State 1catalytic(d) without exogenous ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
6VE4
DownloadVisualize
BU of 6ve4 by Molmil
Pentadecameric PilQ from Pseudomonas aeruginosa
Descriptor: Fimbrial assembly protein PilQ
Authors:McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
Deposit date:2019-12-28
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
6VGQ
DownloadVisualize
BU of 6vgq by Molmil
ClpP1P2 complex from M. tuberculosis with GLF-CMK bound to ClpP1
Descriptor: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, Z-Gly-leu-phe-CH2Cl
Authors:Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-08
Release date:2020-03-18
Last modified:2020-04-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VGK
DownloadVisualize
BU of 6vgk by Molmil
ClpP1P2 complex from M. tuberculosis
Descriptor: ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2
Authors:Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-08
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VFX
DownloadVisualize
BU of 6vfx by Molmil
ClpXP from Neisseria meningitidis - Conformation B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
Authors:Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-06
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VFS
DownloadVisualize
BU of 6vfs by Molmil
ClpXP from Neisseria meningitidis - Conformation A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
Authors:Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-06
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VE2
DownloadVisualize
BU of 6ve2 by Molmil
Tetradecameric PilQ bound by TsaP heptamer from Pseudomonas aeruginosa
Descriptor: Fimbrial assembly protein PilQ, LysM domain-containing protein
Authors:McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
Deposit date:2019-12-28
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
6VE3
DownloadVisualize
BU of 6ve3 by Molmil
Tetradecameric PilQ from Pseudomonas aeruginosa
Descriptor: Fimbrial assembly protein PilQ
Authors:McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
Deposit date:2019-12-28
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon