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PDB: 126 results
6QZO
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BU of 6qzo by Molmil
Crystal structure of DyP-type peroxidase from Cellulomonas bogoriensis
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Peroxidase, TRIETHYLENE GLYCOL
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2019-03-12
Release date:2019-04-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a New DyP-Peroxidase from the Alkaliphilic Cellulomonad, Cellulomonas bogoriensis.
Molecules, 24, 2019
5OX2
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BU of 5ox2 by Molmil
Crystal structure of thymoligase, a substrate-tailored peptiligase variant
Descriptor: Fragment of prodomain, SULFATE ION, Subtilisin BPN'
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-09-05
Release date:2018-01-10
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Design of a substrate-tailored peptiligase variant for the efficient synthesis of thymosin-alpha1.
Org. Biomol. Chem., 16, 2018
5K8E
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BU of 5k8e by Molmil
Xylooligosaccharide oxidase from Myceliophthora thermophila C1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rozeboom, H.J, Ferrari, A.R, Fraaije, M.W.
Deposit date:2016-05-30
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Discovery of a Xylooligosaccharide Oxidase from Myceliophthora thermophila C1.
J.Biol.Chem., 291, 2016
5L6F
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BU of 5l6f by Molmil
Xylooligosaccharide oxidase from Myceliophthora thermophila C1 in complex with Xylobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Rozeboom, H.J, Ferrari, A.R, Fraaije, M.W.
Deposit date:2016-05-30
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of a Xylooligosaccharide Oxidase from Myceliophthora thermophila C1.
J.Biol.Chem., 291, 2016
6YRA
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BU of 6yra by Molmil
Crystal structure of ATP-dependent caprolactamase from Pseudomonas jessenii
Descriptor: 5-oxoprolinase, Hydantoinase, ZINC ION
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2020-04-20
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4 Å)
Cite:Catalytic and structural properties of ATP-dependent caprolactamase from Pseudomonas jessenii.
Proteins, 89, 2021
6Z1X
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BU of 6z1x by Molmil
Crystal structure of human steroid carrier protein SL (SCP-2L) mutant V83C
Descriptor: OXTOXYNOL-10, Peroxisomal multifunctional enzyme type 2, SULFATE ION
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2020-05-14
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity
Acs Catalysis, 11, 2021
6Z1W
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BU of 6z1w by Molmil
Crystal structure of human steroid carrier protein SL (SCP-2L) mutant A100C
Descriptor: OXTOXYNOL-10, Peroxisomal multifunctional enzyme type 2, SULFATE ION
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2020-05-14
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity
Acs Catalysis, 11, 2021
7PUO
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BU of 7puo by Molmil
Structure of a fused 4-OT variant engineered for asymmetric Michael addition reactions
Descriptor: 2-hydroxymuconate tautomerase,Chains: A,B,C,D,E,F,2-hydroxymuconate tautomerase, CHLORIDE ION, GLYCEROL
Authors:Rozeboom, H.J, Thunnissen, A.M.W.H, Poelarends, G.J.
Deposit date:2021-09-30
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Gene Fusion and Directed Evolution to Break Structural Symmetry and Boost Catalysis by an Oligomeric C-C Bond-Forming Enzyme.
Angew.Chem.Int.Ed.Engl., 61, 2022
3BMV
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BU of 3bmv by Molmil
Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P
Descriptor: CALCIUM ION, Cyclomaltodextrin glucanotransferase, GLYCEROL, ...
Authors:Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
Deposit date:2007-12-13
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
3BMW
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BU of 3bmw by Molmil
Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P complexed with a maltoheptaose inhibitor
Descriptor: 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
Deposit date:2007-12-13
Release date:2008-05-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
7OG2
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BU of 7og2 by Molmil
Crystal structure of Pseudoalteromonas luteoviolacea L-amino acid oxidase
Descriptor: Amine oxidoreductase, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Rozeboom, H.J, Savino, S, Fraaije, M.W.
Deposit date:2021-05-06
Release date:2021-11-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Kinetic and Structural Properties of a Robust Bacterial L-Amino Acid Oxidase
Catalysts, 2021
8P2A
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BU of 8p2a by Molmil
Crystal structure of SaFMN3 domain 2
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding domain-containing protein
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2023-05-15
Release date:2023-07-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of two bacterial multi-flavinylated proteins harboring multiple covalent flavin cofactors.
Bba Adv, 4, 2023
8P2B
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BU of 8p2b by Molmil
Crystal structure of CbFMN4 domain 1
Descriptor: Clostridiaceae bacterium FMN4 domain 1, FLAVIN MONONUCLEOTIDE
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2023-05-15
Release date:2023-07-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Characterization of two bacterial multi-flavinylated proteins harboring multiple covalent flavin cofactors.
Bba Adv, 4, 2023
8PA2
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BU of 8pa2 by Molmil
Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2023-06-07
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
To Be Published
8PA1
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BU of 8pa1 by Molmil
Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
Descriptor: GLYCEROL, Oxidoreductase, short-chain dehydrogenase/reductase family, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2023-06-07
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
To Be Published
6I9G
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BU of 6i9g by Molmil
Crystal structure of encapsulin from Mycolicibacterium hassiacum
Descriptor: GLYCEROL, Linocin-M18, SULFATE ION
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2018-11-23
Release date:2019-12-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a robust bacterial protein cage and its application as a versatile biocatalytic platform through enzyme encapsulation.
Biochem.Biophys.Res.Commun., 529, 2020
5L6G
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BU of 5l6g by Molmil
Xylooligosaccharide oxidase from Myceliophthora thermophila C1 in complex with Xylose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FAD linked oxidase-like protein, ...
Authors:Rozeboom, H.J, Ferrari, A.R, Fraaije, M.W.
Deposit date:2016-05-30
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of a Xylooligosaccharide Oxidase from Myceliophthora thermophila C1.
J.Biol.Chem., 291, 2016
5NH6
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BU of 5nh6 by Molmil
Crystal structure of xylose isomerase from Piromyces E2 Complexed with one Mg2+ ion and xylitol
Descriptor: MAGNESIUM ION, SULFATE ION, Xylitol, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NH5
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BU of 5nh5 by Molmil
Crystal structure of native xylose isomerase from Piromyces E2
Descriptor: CALCIUM ION, FE (II) ION, GLYCEROL, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NH8
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BU of 5nh8 by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with two Ca2+ ions and xylose
Descriptor: CALCIUM ION, D-xylose, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHM
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BU of 5nhm by Molmil
Crystal structure of apo xylose isomerase from Piromyces E2
Descriptor: ACETIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHE
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BU of 5nhe by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with two Cd2+ ions and xylose
Descriptor: CADMIUM ION, D-xylose, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
8QYG
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BU of 8qyg by Molmil
Crystal structure of Nitroreductase from Bacillus tequilensis
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Rozeboom, H.J, Russo, S, Fraaije, M.W, Poelarends, G.J.
Deposit date:2023-10-26
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of Nitroreductase from Bacillus tequilensis
To Be Published
5NHB
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BU of 5nhb by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with two Fe2+ ions
Descriptor: FE (II) ION, SULFATE ION, Xylose isomerase
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHA
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BU of 5nha by Molmil
Crystal structure of xylose isomerase from Piromyces sp. E2 in complex with two Mn2+ ions and sorbitol
Descriptor: MANGANESE (II) ION, SULFATE ION, Xylose isomerase, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017

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