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PDB: 29 results

4MD1
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BU of 4md1 by Molmil
Orange species of bacteriorhodopsin from Halobacterium salinarum
Descriptor: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
Authors:Borshchevskiy, V, Erofeev, I, Round, E, Weik, M, Ishchenko, A, Gushchin, I, Mishin, A, Bueldt, G, Gordeliy, V.
Deposit date:2013-08-22
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Low-dose X-ray radiation induces structural alterations in proteins.
Acta Crystallogr.,Sect.D, 70, 2014
4MND
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BU of 4mnd by Molmil
Crystal structure of Archaeoglobus fulgidus IPCT-DIPPS bifunctional membrane protein
Descriptor: CTP L-myo-inositol-1-phosphate cytidylyltransferase/CDP-L-myo-inositol myo-inositolphosphotransferase, EICOSANE, MAGNESIUM ION
Authors:Nogly, P, Gushchin, I, Remeeva, A, Esteves, A.M, Ishchenko, A, Ma, P, Grudinin, S, Borges, N, Round, E, Moraes, I, Borshchevskiy, V, Santos, H, Gordeliy, V, Archer, M.
Deposit date:2013-09-10
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:X-ray structure of a CDP-alcohol phosphatidyltransferase membrane enzyme and insights into its catalytic mechanism.
Nat Commun, 5, 2014
6TQJ
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BU of 6tqj by Molmil
Crystal structure of the c14 ring of the F1FO ATP synthase from spinach chloroplast
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ATP synthase subunit c, chloroplastic, ...
Authors:Kovalev, K, Gushchin, I, Vlasov, A, Round, E, Polovinkin, V, Gordeliy, V.
Deposit date:2019-12-16
Release date:2019-12-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unusual features of the c-ring of F1FOATP synthases.
Sci Rep, 9, 2019
3QAP
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BU of 3qap by Molmil
Crystal structure of Natronomonas pharaonis sensory rhodopsin II in the ground state
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, EICOSANE, RETINAL, ...
Authors:Gushchin, I, Reshetnyak, A, Borshchevskiy, V, Ishchenko, A, Round, E, Grudinin, S, Engelhard, M, Buldt, G, Gordeliy, V.
Deposit date:2011-01-11
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Active State of Sensory Rhodopsin II: Structural Determinants for Signal Transfer and Proton Pumping.
J.Mol.Biol., 412, 2011
3QDC
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BU of 3qdc by Molmil
Crystal structure of Natronomonas pharaonis sensory rhodopsin II in the active state
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, EICOSANE, RETINAL, ...
Authors:Gushchin, I, Reshetnyak, A, Borshchevskiy, V, Ishchenko, A, Round, E, Grudinin, S, Engelhard, M, Buldt, G, Gordeliy, V.
Deposit date:2011-01-18
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Active State of Sensory Rhodopsin II: Structural Determinants for Signal Transfer and Proton Pumping.
J.Mol.Biol., 412, 2011
4XXJ
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BU of 4xxj by Molmil
Crystal Structure of Escherichia coli-Expressed Halobacterium salinarum Bacteriorhodopsin in the Trimeric Form
Descriptor: Bacteriorhodopsin, EICOSANE, [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
Authors:Bratanov, D, Balandin, T, Round, E, Gushchin, I, Gordeliy, V.
Deposit date:2015-01-30
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An Approach to Heterologous Expression of Membrane Proteins. The Case of Bacteriorhodopsin.
Plos One, 10, 2015
4OV0
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BU of 4ov0 by Molmil
Structure of Bacteriorhdopsin Transferred from Amphipol A8-35 to a Lipidic Mesophase
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Polovinkin, V, Gushchin, I, Sintsov, M, Round, E, Balandin, T, Chervakov, P, Schevchenko, V, Utrobin, P, Popov, A, Borshchevskiy, V, Mishin, A, Kuklin, A, Willbold, D, Popot, J.L, Gordeliy, V.
Deposit date:2014-02-19
Release date:2014-10-01
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.
J.Membr.Biol., 247, 2014
4XA7
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BU of 4xa7 by Molmil
Soluble part of holo NqrC from V. harveyi
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit C
Authors:Borshchevskiy, V, Round, E, Bertsova, Y, Polovinkin, V, Gushchin, I, Mishin, A, Kovalev, K, Kachalova, G, Popov, A, Bogachev, A, Gordeliy, V.
Deposit date:2014-12-12
Release date:2015-03-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural and Functional Investigation of Flavin Binding Center of the NqrC Subunit of Sodium-Translocating NADH:Quinone Oxidoreductase from Vibrio harveyi.
Plos One, 10, 2015
5BR2
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BU of 5br2 by Molmil
Structure of bacteriorhodopsin crystallized from ND-MSP1
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Nikolaev, M, Round, E, Gushchin, I, Gordeliy, V.
Deposit date:2015-05-29
Release date:2016-09-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Integral Membrane Proteins Can Be Crystallized Directly from Nanodiscs
Cryst.Growth Des., 17, 2017
5BR5
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BU of 5br5 by Molmil
Structure of bacteriorhodopsin crystallized from ND-MSP1E3D1
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Nikolaev, M, Round, E, Gushchin, I, Gordeliy, V.
Deposit date:2015-05-29
Release date:2016-09-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Integral Membrane Proteins Can Be Crystallized Directly from Nanodiscs
Cryst.Growth Des., 17, 2017
8BX1
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BU of 8bx1 by Molmil
Oct4/Sox2 protein:DNA complex
Descriptor: HOXB1_f, HOXB1_r, POU domain, ...
Authors:Chojnowski, G, Wilmanns, M, Round, E.
Deposit date:2022-12-07
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Oct4-Soc2-HoxB1 complex
To Be Published
8BX2
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BU of 8bx2 by Molmil
Oct4/Sox2 protein:DNA complex
Descriptor: POU domain, class 5, transcription factor 1, ...
Authors:Chojnowski, G, Wilmanns, M, Round, E.
Deposit date:2022-12-07
Release date:2023-12-20
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Crystal structure of Oct4-Soc2-UTF1 complex
To Be Published
7Z09
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BU of 7z09 by Molmil
Crystal structure of the ground state of bacteriorhodopsin at 1.05 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0A
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BU of 7z0a by Molmil
Crystal structure of the ground state of bacteriorhodopsin at 1.22 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0D
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BU of 7z0d by Molmil
Crystal structure of the L state of bacteriorhodopsin at 1.20 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0C
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BU of 7z0c by Molmil
Crystal structure of the K state of bacteriorhodopsin at 1.53 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0E
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BU of 7z0e by Molmil
Crystal structure of the M state of bacteriorhodopsin at 1.22 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
5A3Z
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BU of 5a3z by Molmil
Structure of monoclinic Lysozyme obtained by multi crystal data collection
Descriptor: GLYCEROL, LYSOZYME, NITRATE ION
Authors:Zander, U, Bourenkov, G, Popov, A.N, de Sanctis, D, McCarthy, A.A, Svensson, O, Round, E.S, Gordeliy, V.I, Mueller-Dieckmann, C, Leonard, G.A.
Deposit date:2015-06-04
Release date:2015-11-11
Last modified:2015-11-25
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Meshandcollect: An Automated Multi-Crystal Data-Collection Workflow for Synchrotron Macromolecular Crystallography Beamlines.
Acta Crystallogr.,Sect.D, 71, 2015
5A45
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BU of 5a45 by Molmil
Structure of Bacteriorhodopsin obtained from 5um crystals by multi crystal data collection
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Zander, U, Bourenkov, G, Popov, A.N, de Sanctis, D, McCarthy, A.A, Svensson, O, Round, E.S, Gordeliy, V.I, Mueller-Dieckmann, C, Leonard, G.A.
Deposit date:2015-06-05
Release date:2015-11-11
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Meshandcollect: An Automated Multi-Crystal Data-Collection Workflow for Synchrotron Macromolecular Crystallography Beamlines.
Acta Crystallogr.,Sect.D, 71, 2015
5A44
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BU of 5a44 by Molmil
Structure of Bacteriorhodopsin obtained from 20um crystals by multi crystal data collection
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, BACTERIORHODOPSIN, HEPTANE, ...
Authors:Zander, U, Bourenkov, G, Popov, A.N, de Sanctis, D, McCarthy, A.A, Svensson, O, Round, E.S, Gordeliy, V.I, Mueller-Dieckmann, C, Leonard, G.A.
Deposit date:2015-06-05
Release date:2015-11-11
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Meshandcollect: An Automated Multi-Crystal Data-Collection Workflow for Synchrotron Macromolecular Crystallography Beamlines.
Acta Crystallogr.,Sect.D, 71, 2015
5A47
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BU of 5a47 by Molmil
Structure of Thaumatin obtained by multi crystal data collection
Descriptor: L(+)-TARTARIC ACID, THAUMATIN-1
Authors:Zander, U, Bourenkov, G, Popov, A.N, de Sanctis, D, McCarthy, A.A, Svensson, O, Round, E.S, Gordeliy, V.I, Mueller-Dieckmann, C, Leonard, G.A.
Deposit date:2015-06-05
Release date:2015-11-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Meshandcollect: An Automated Multi-Crystal Data-Collection Workflow for Synchrotron Macromolecular Crystallography Beamlines.
Acta Crystallogr.,Sect.D, 71, 2015
5A3Y
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BU of 5a3y by Molmil
SAD structure of Thermolysin obtained by multi crystal data collection
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, LYSINE, ...
Authors:Zander, U, Bourenkov, G, Popov, A.N, de Sanctis, D, McCarthy, A.A, Svensson, O, Round, E.S, Gordeliy, V.I, Mueller-Dieckmann, C, Leonard, G.A.
Deposit date:2015-06-04
Release date:2015-11-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Meshandcollect: An Automated Multi-Crystal Data-Collection Workflow for Synchrotron Macromolecular Crystallography Beamlines.
Acta Crystallogr.,Sect.D, 71, 2015
4GYC
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BU of 4gyc by Molmil
Structure of the SRII(D75N mutant)/HtrII Complex in I212121 space group ("U" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2012-09-05
Release date:2013-05-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.0501 Å)
Cite:Ground state structure of D75N mutant of sensory rhodopsin II in complex with its cognate transducer.
J Photochem Photobiol B, 123C, 2013
4HYJ
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BU of 4hyj by Molmil
Crystal structure of Exiguobacterium sibiricum rhodopsin
Descriptor: EICOSANE, RETINAL, Rhodopsin
Authors:Gushchin, I, Chervakov, P, Kuzmichev, P, Popov, A, Round, E, Borshchevskiy, V, Dolgikh, D, Kirpichnikov, M, Petrovskaya, L, Chupin, V, Arseniev, A, Gordeliy, V.
Deposit date:2012-11-13
Release date:2013-07-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the proton pumping by unusual proteorhodopsin from nonmarine bacteria.
Proc.Natl.Acad.Sci.USA, 110, 2013
5JJJ
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BU of 5jjj by Molmil
Structure of the SRII/HtrII Complex in P64 space group ("U" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-24
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017

 

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数据于2024-10-30公开中

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