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PDB: 633 件

1Y3J
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Solution structure of the copper(I) form of the fifth domain of Menkes protein
分子名称: COPPER (II) ION, Copper-transporting ATPase 1
著者Banci, L, Chasapis, C.T, Ciofi-Baffoni, S, Hadjiliadis, N, Rosato, A, Structural Proteomics in Europe (SPINE)
登録日2004-11-25
公開日2005-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献An NMR study of the interaction between the human copper(I) chaperone and the second and fifth metal-binding domains of the Menkes protein
Febs J., 272, 2005
5U9G
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BU of 5u9g by Molmil
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Svidritskiy, E, Madireddy, R, Diaz-Avalos, R, Grant, T, Grigorieff, N, Sousa, D, Korostelev, A.A.
登録日2016-12-16
公開日2017-03-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of ribosome rescue by ArfA and RF2.
Elife, 6, 2017
5EPM
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BU of 5epm by Molmil
Ceratotoxin variant in complex with specific antibody Fab fragment
分子名称: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, Beta-theraphotoxin-Cm1a
著者Strop, P, Shcherbatko, A, Rossi, A.
登録日2015-11-11
公開日2016-05-04
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Engineering Highly Potent and Selective Microproteins against Nav1.7 Sodium Channel for Treatment of Pain.
J.Biol.Chem., 291, 2016
5ELG
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BU of 5elg by Molmil
The structure of DHAR1 from Arabidopsis thaliana
分子名称: GLUTATHIONE, GLYCEROL, Glutathione S-transferase DHAR1, ...
著者Menault, M, Roszak, A.W, Lapthorn, A.J.
登録日2015-11-04
公開日2016-11-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Arabidopsis thaliana DHAR1 apo structure
To Be Published
6BU8
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BU of 6bu8 by Molmil
70S ribosome with S1 domains 1 and 2 (Class 1)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Loveland, A.B, Korostelev, A.A.
登録日2017-12-08
公開日2018-01-31
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural dynamics of protein S1 on the 70S ribosome visualized by ensemble cryo-EM.
Methods, 137, 2018
6BOH
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BU of 6boh by Molmil
Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Korostelev, A.A.
登録日2017-11-20
公開日2018-05-23
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Conformational Control of Translation Termination on the 70S Ribosome.
Structure, 26, 2018
3RFR
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BU of 3rfr by Molmil
Crystal Structure of particulate methane monooxygenase (pMMO) from Methylocystis sp. strain M
分子名称: COPPER (II) ION, DINUCLEAR COPPER ION, PmoA, ...
著者Smith, S.M, Rosenzweig, A.C.
登録日2011-04-06
公開日2011-11-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Crystal Structure and Characterization of Particulate Methane Monooxygenase from Methylocystis species Strain M.
Biochemistry, 50, 2011
6BOK
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E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Korostelev, A.A.
登録日2017-11-20
公開日2018-05-23
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Conformational Control of Translation Termination on the 70S Ribosome.
Structure, 26, 2018
1PV0
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Structure of the Sda antikinase
分子名称: Sda
著者Rowland, S.L, Burkholder, W.F, Maciejewski, M.W, Grossman, A.D, King, G.F.
登録日2003-06-26
公開日2004-04-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and mechanism of Sda: an inhibitor of the histidine kinases that regulate initiation of sporulation in Bacillus subtilis
Mol.Cell, 13, 2004
6QT9
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BU of 6qt9 by Molmil
Cryo-EM structure of SH1 full particle.
分子名称: ORF 24, ORF 25, ORF 31, ...
著者De Colibus, L, Roine, E, Walter, T.S, Ilca, S.L, Wang, X, Wang, N, Roseman, A.M, Bamford, D, Huiskonen, J.T, Stuart, D.I.
登録日2019-02-22
公開日2019-04-10
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Assembly of complex viruses exemplified by a halophilic euryarchaeal virus.
Nat Commun, 10, 2019
1DO9
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BU of 1do9 by Molmil
SOLUTION STRUCTURE OF OXIDIZED MICROSOMAL RABBIT CYTOCHROME B5. FACTORS DETERMINING THE HETEROGENEOUS BINDING OF THE HEME.
分子名称: CYTOCHROME B5, PROTOPORPHYRIN IX CONTAINING FE
著者Banci, L, Bertini, I, Rosato, A, Scacchieri, S.
登録日1999-12-20
公開日2000-01-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of oxidized microsomal rabbit cytochrome b5. Factors determining the heterogeneous binding of the heme.
Eur.J.Biochem., 267, 2000
3RF9
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X-ray structure of RlmN from Escherichia coli
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, IRON/SULFUR CLUSTER, Ribosomal RNA large subunit methyltransferase N
著者Boal, A.K, Grove, T.L, McLaughlin, M.I, Yennawar, N, Booker, S.J, Rosenzweig, A.C.
登録日2011-04-05
公開日2011-05-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for methyl transfer by a radical SAM enzyme.
Science, 332, 2011
5UYM
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BU of 5uym by Molmil
70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity
Nature, 546, 2017
1PLS
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BU of 1pls by Molmil
SOLUTION STRUCTURE OF A PLECKSTRIN HOMOLOGY DOMAIN
分子名称: PLECKSTRIN HOMOLOGY DOMAIN
著者Yoon, H.S, Hajduk, P.J, Petros, A.M, Olejniczak, E.T, Meadows, R.P, Fesik, S.W.
登録日1994-05-03
公開日1995-06-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of a pleckstrin-homology domain.
Nature, 369, 1994
5UYQ
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70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity
Nature, 546, 2017
2B4J
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BU of 2b4j by Molmil
Structural basis for the recognition between HIV-1 integrase and LEDGF/p75
分子名称: GLYCEROL, Integrase (IN), PC4 and SFRS1 interacting protein, ...
著者Cherepanov, P, Ambrosio, A.L, Rahman, S, Ellenberger, T, Engelman, A.
登録日2005-09-24
公開日2005-10-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural basis for the recognition between HIV-1 integrase and transcriptional coactivator p75
Proc.Natl.Acad.Sci.Usa, 102, 2005
5UYN
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BU of 5uyn by Molmil
70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity
Nature, 546, 2017
1R65
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BU of 1r65 by Molmil
Crystal structure of ferrous soaked Ribonucleotide Reductase R2 subunit (wildtype) at pH 5 from E. coli
分子名称: FE (II) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
著者Voegtli, W.C, Sommerhalter, M, Saleh, L, Baldwin, J, Bollinger Jr, J.M, Rosenzweig, A.C.
登録日2003-10-14
公開日2004-01-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003
4O65
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Crystal structure of the cupredoxin domain of amoB from Nitrosocaldus yellowstonii
分子名称: COPPER (II) ION, Putative archaeal ammonia monooxygenase subunit B, SULFATE ION
著者Lawton, T.J, Ham, J, Sun, T, Rosenzweig, A.C.
登録日2013-12-20
公開日2014-04-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structural conservation of the B subunit in the ammonia monooxygenase/particulate methane monooxygenase superfamily.
Proteins, 82, 2014
3RFA
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BU of 3rfa by Molmil
X-ray structure of RlmN from Escherichia coli in complex with S-adenosylmethionine
分子名称: IRON/SULFUR CLUSTER, Ribosomal RNA large subunit methyltransferase N, S-ADENOSYLMETHIONINE
著者Boal, A.K, Grove, T.L, McLaughlin, M.I, Yennawar, N, Booker, S.J, Rosenzweig, A.C.
登録日2011-04-05
公開日2011-05-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for methyl transfer by a radical SAM enzyme.
Science, 332, 2011
5UYL
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BU of 5uyl by Molmil
70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Demo, G, Grigorieff, N, Korostelev, A.A.
登録日2017-02-24
公開日2017-06-14
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Ensemble cryo-EM elucidates the mechanism of translation fidelity.
Nature, 546, 2017
3RJ6
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BU of 3rj6 by Molmil
Crystal Structure of Horse heart ferric myoglobin; K45E/K63E/K96E mutant
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Smith, S.M, Rosenzweig, A.C.
登録日2011-04-15
公開日2012-05-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Charge-Disproportionation Symmetry Breaking Creates a Heterodimeric Myoglobin Complex with Enhanced Affinity and Rapid Intracomplex Electron Transfer.
J.Am.Chem.Soc., 138, 2016
5LOF
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BU of 5lof by Molmil
Crystal structure of the MBP-MCL1 complex with highly selective and potent inhibitor of MCL1
分子名称: (2~{R})-2-[5-[3-chloranyl-2-methyl-4-[2-(4-methylpiperazin-1-yl)ethoxy]phenyl]-6-(5-fluoranylfuran-2-yl)thieno[2,3-d]pyrimidin-4-yl]oxy-3-[2-[[2-[2,2,2-tris(fluoranyl)ethyl]pyrazol-3-yl]methoxy]phenyl]propanoic acid, Maltose-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Dokurno, P, Kotschy, A, Szlavik, Z, Murray, J, Davidson, J, Csekei, M, Paczal, A, Szabo, Z, Sipos, S, Radics, G, Proszenyak, A, Balint, B, Ondi, L, Blasko, G, Robertson, A, Surgenor, A, Chen, I, Matassova, N, Smith, J, Pedder, C, Graham, C, Geneste, O.
登録日2016-08-09
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The MCL1 inhibitor S63845 is tolerable and effective in diverse cancer models.
Nature, 538, 2016
5F28
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Crystal structure of FAT domain of Focal Adhesion Kinase (FAK) bound to the transcription factor MEF2C
分子名称: Focal adhesion kinase 1, MEF2C
著者Cardoso, A.C, Ambrosio, A.L.B, Dessen, A, Franchini, K.G.
登録日2015-12-01
公開日2016-07-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献FAK Forms a Complex with MEF2 to Couple Biomechanical Signaling to Transcription in Cardiomyocytes.
Structure, 24, 2016
4Z3S
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Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 3'-deoxy-3'-{[(2E)-3-(4-{[(4Z)-6-O-(6-deoxy-3,4-di-O-methyl-alpha-D-mannopyranosyl)-5-O-methyl-alpha-D-threo-hex-4-enofuranosyl]oxy}phenyl)-2-methylprop-2-enoyl]amino}-N,N-dimethyladenosine, ...
著者Polikanov, Y.S, Starosta, A.L, Juette, M.F, Altman, R.B, Terry, D.S, Lu, W, Burnett, B.J, Dinos, G, Reynolds, K, Blanchard, S.C, Steitz, T.A, Wilson, D.N.
登録日2015-03-31
公開日2015-06-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015

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