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PDB: 213 results

8WHN
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BU of 8whn by Molmil
Crystal Structure of the cytoplasmic domain of OST1 (Ribophorin I) from Candidatus Prometheoarchaeum syntrophicum strain MK-D1
Descriptor: Ribophorin 1 superfamily protein
Authors:Robinson, R.C, Carilo, I.
Deposit date:2023-09-23
Release date:2024-09-25
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Intercompatibility of eukaryotic and Asgard archaea ribosome-translocon machineries.
J.Biol.Chem., 300, 2024
7X3H
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BU of 7x3h by Molmil
The structure of Clostridium botulinum ParM in the apo conformation
Descriptor: CBg-ParM triple mutant R204D, K230D and N234D
Authors:Robinson, R.C, Ali, S, Narita, A.
Deposit date:2022-03-01
Release date:2023-03-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of tubulin H393D mutant from Odinarchaeota
To Be Published
7NDG
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Cryo-EM structure of the ternary complex between Netrin-1, Neogenin and Repulsive Guidance Molecule B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neogenin, ...
Authors:Robinson, R.A, Griffiths, S.C, van de Haar, L.L, Malinauskas, T, van Battum, E.Y, Zelina, P, Schwab, R.A, Karia, D, Malinauskaite, L, Brignani, S, van den Munkhof, M, Dudukcu, O, De Ruiter, A.A, Van den Heuvel, D.M.A, Bishop, B, Elegheert, J, Aricescu, A.R, Pasterkamp, R.J, Siebold, C.
Deposit date:2021-02-01
Release date:2021-03-31
Last modified:2021-04-28
Method:ELECTRON MICROSCOPY (5.98 Å)
Cite:Simultaneous binding of Guidance Cues NET1 and RGM blocks extracellular NEO1 signaling.
Cell, 184, 2021
7WHF
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Heimdallarchaeota gelsolin (2DGel) bound to rabbit actin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Robinson, R.C, Akil, C.
Deposit date:2021-12-30
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical evidence for the emergence of a calcium-regulated actin cytoskeleton prior to eukaryogenesis
Commun Biol, 5, 2022
7WHG
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BU of 7whg by Molmil
Lokiarchaeota gelsolin (2DGel) bound to two molecules of rabbit actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Robinson, R.C, Akil, C.
Deposit date:2021-12-30
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural and biochemical evidence for the emergence of a calcium-regulated actin cytoskeleton prior to eukaryogenesis
Commun Biol, 5, 2022
6QP7
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Drosophila Semaphorin 2a
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Robinson, R.A, Rozbesky, D, Harlos, K, Siebold, C, Jones, E.Y.
Deposit date:2019-02-13
Release date:2019-08-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Diversity of oligomerization in Drosophila semaphorins suggests a mechanism of functional fine-tuning.
Nat Commun, 10, 2019
6QP8
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BU of 6qp8 by Molmil
Drosophila Semaphorin 2b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRATE ANION, ...
Authors:Robinson, R.A, Rozbesky, D, Harlos, K, Siebold, C, Jones, E.Y.
Deposit date:2019-02-13
Release date:2019-08-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Diversity of oligomerization in Drosophila semaphorins suggests a mechanism of functional fine-tuning.
Nat Commun, 10, 2019
7YH1
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Roadblock from Candidatus Prometheoarchaeum syntrophicum strain MK-D1
Descriptor: Roadblock/LC7 domain protein, ZINC ION
Authors:Robinson, R.C, Tran, L.T.
Deposit date:2022-07-12
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Roadblock from Candidatus Prometheoarchaeum syntrophicum strain MK-D1
To Be Published
7C2G
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BU of 7c2g by Molmil
Crystal Structure of the Thorarchaeota 2DGel/rabbit actin complex
Descriptor: 2DGel3, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Robinson, R.C, Akil, C.
Deposit date:2020-05-07
Release date:2020-08-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Insights into the evolution of regulated actin dynamics via characterization of primitive gelsolin/cofilin proteins from Asgard archaea
Proc.Natl.Acad.Sci.USA, 117, 2020
7YH3
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BU of 7yh3 by Molmil
TRAPPC3 from Thorarchaeota SMTZ1-45
Descriptor: TRAPPC3 from Thorarchaeota SMTZ1-45, ZINC ION
Authors:Robinson, R.C, Tran, L.T.
Deposit date:2022-07-12
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:TRAPPC3 from Thorarchaeota SMTZ1-45
To Be Published
7YH2
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BU of 7yh2 by Molmil
TRAPPC3 from Thorarchaeota AB25
Descriptor: TRAPPC3 from Thorarchaeota AB25, ZINC ION
Authors:Robinson, R.C, Tran, L.T.
Deposit date:2022-07-12
Release date:2023-07-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:TRAPPC3 from Thorarchaeota AB25
To Be Published
5YEE
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BU of 5yee by Molmil
Crystal structure of LokiProfilin1/Rabbit Actin Complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Robinson, R.C, Akil, C.
Deposit date:2017-09-16
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Genomes of Asgard archaea encode profilins that regulate actin.
Nature, 562, 2018
5YED
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BU of 5yed by Molmil
Crystal structure of LokiProfilin1
Descriptor: Uncharacterized protein
Authors:Robinson, R.C, Akil, C.
Deposit date:2017-09-16
Release date:2018-09-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Genomes of Asgard archaea encode profilins that regulate actin.
Nature, 562, 2018
5ZZB
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BU of 5zzb by Molmil
LokiProfilin2/Rabbit Actin Complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Robinson, R.C, Akil, C.
Deposit date:2018-05-31
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Genomes of Asgard archaea encode profilins that regulate actin.
Nature, 562, 2018
7EVH
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BU of 7evh by Molmil
Odinarchaeota tubulin H393D mutant, in a psuedo protofilament arrangement, bound to 59% GDP, 41% phosphate
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVI
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BU of 7evi by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 79% GTP, 21% GDP, Na+, Mg2+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7F1A
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BU of 7f1a by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound 78% GTP/22% GDP 1 K+, 1 Mg2+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-06-08
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVG
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BU of 7evg by Molmil
Apo Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a psuedo-protofilament arrangement
Descriptor: PHOSPHATE ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVB
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BU of 7evb by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 77% GTP/23% and 2 Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVE
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BU of 7eve by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 100% GDP and 2 Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, SODIUM ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVC
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BU of 7evc by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 60% GTP/40% GDP and 2 Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVL
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BU of 7evl by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 64% GTP/36% GDP and 2 Na+ in a small unit cell
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVD
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Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 53% GTP/47% and 2 Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVK
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BU of 7evk by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 78% GTP, 22% GDP, Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7F1B
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BU of 7f1b by Molmil
Odinarchaeota tubulin H393D mutant, in a pseudo protofilament arrangement, after GTP hydrolysis and phosphate release
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-06-08
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022

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PDB entries from 2024-10-30

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