Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 50 results

3MNR
DownloadVisualize
BU of 3mnr by Molmil
Crystal Structure of Benzamide SNX-1321 bound to Hsp90
Descriptor: 2-[(3,4,5-trimethoxyphenyl)amino]-4-(2,6,6-trimethyl-4-oxo-4,5,6,7-tetrahydro-1H-indol-1-yl)benzamide, Heat shock protein HSP 90-alpha
Authors:Veal, J.M, Fadden, P, Huang, K.H, Rice, J, Hall, S.E, Haytstead, T.A.
Deposit date:2010-04-22
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Application of Chemoproteomics to Drug Discovery: Identification of a Clinical Candidate Targeting Hsp90.
Chem.Biol., 17, 2010
1YXT
DownloadVisualize
BU of 1yxt by Molmil
Crystal Structure of Kinase Pim1 in complex with AMPPNP
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YXU
DownloadVisualize
BU of 1yxu by Molmil
Crystal Structure of Kinase Pim1 in Complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structures of Proto-oncogene Kinase Pim1: A Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma.
J.Mol.Biol., 348, 2005
1YXX
DownloadVisualize
BU of 1yxx by Molmil
Crystal Structure of Kinase Pim1 in complex with (3E)-3-[(4-HYDROXYPHENYL)IMINO]-1H-INDOL-2(3H)-ONE
Descriptor: (3E)-3-[(4-HYDROXYPHENYL)IMINO]-1H-INDOL-2(3H)-ONE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YWV
DownloadVisualize
BU of 1ywv by Molmil
Crystal Structures of Proto-Oncogene Kinase Pim1: a Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma
Descriptor: IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
Deposit date:2005-02-18
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YXV
DownloadVisualize
BU of 1yxv by Molmil
Crystal Structure of Kinase Pim1 in complex with 3,4-Dihydroxy-1-methylquinolin-2(1H)-one
Descriptor: 3,4-DIHYDROXY-1-METHYLQUINOLIN-2(1H)-ONE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Proto-oncogene Kinase Pim1: A Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma.
J.Mol.Biol., 348, 2005
1YXS
DownloadVisualize
BU of 1yxs by Molmil
Crystal Structure of Kinase Pim1 with P123M mutation
Descriptor: IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1BPS
DownloadVisualize
BU of 1bps by Molmil
MINOR CONFORMER OF A BENZO[A]PYRENE DIOL EPOXIDE ADDUCT OF DA IN DUPLEX DNA
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, DNA (5'-D(*CP*TP*CP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*CP*(BAP)AP*CP*GP*AP*G)-3')
Authors:Schwartz, J.S, Rice, J.S, Luxon, B.A, Sayer, J.M, Xie, G, Yeh, H.J.C, Liu, X, Jerina, D.M, Gorenstein, D.G.
Deposit date:1998-08-06
Release date:1998-08-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the minor conformer of a DNA duplex containing a dG mismatch opposite a benzo[a]pyrene diol epoxide/dA adduct: glycosidic rotation from syn to anti at the modified deoxyadenosine.
Biochemistry, 36, 1997
1N8C
DownloadVisualize
BU of 1n8c by Molmil
Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex
Descriptor: (9S,10R)-9-HYDROXY-7,8,9,10-TETRAHYDROBENZO[A]PYRENE, 5'-D(*CP*CP*TP*CP*GP*TP*GP*AP*CP*CP*G)-3', 5'-D(*CP*GP*GP*TP*CP*AP*CP*GP*AP*GP*G)-3'
Authors:Volk, D.E, Thiviyanathan, V, Rice, J.S, Luxon, B.A, Shah, J.H, Yagi, H, Sayer, J.M, Yeh, H.J.C, Jerina, D.M, Gorenstein, D.G.
Deposit date:2002-11-20
Release date:2003-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex
Biochemistry, 42, 2003
1AC3
DownloadVisualize
BU of 1ac3 by Molmil
SOLUTION STRUCTURE OF AN RNA-DNA HYBRID DUPLEX CONTAINING A 3'-THIOFORMACETAL LINKER AND AN RNA A-TRACT, NMR, 8 STRUCTURES
Descriptor: ANTISENSE HYBRID DUPLEX, DNA (5'-D(*(TCP)P*TP*GP*CP*GP*C)-3')
Authors:Cross, C.W, Rice, J.S, Gao, X.
Deposit date:1997-02-11
Release date:1997-06-16
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of an RNA x DNA hybrid duplex containing a 3'-thioformacetal linker and an RNA A-tract.
Biochemistry, 36, 1997
1FYY
DownloadVisualize
BU of 1fyy by Molmil
HPRT GENE MUTATION HOTSPOT WITH A BPDE2(10R) ADDUCT
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 5'-D(*TP*GP*CP*CP*CP*TP*TP*GP*AP*CP*TP*A)-3', HPRT DNA WITH BENZO[A]PYRENE-ADDUCTED DA7
Authors:Volk, D.E, Rice, J.S, Luxon, B.A, Yeh, H.J.C, Liang, C, Xie, G, Sayer, J.M, Jerina, D.M, Gorenstein, D.G.
Deposit date:2000-10-03
Release date:2000-12-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR evidence for syn-anti interconversion of a trans opened (10R)-dA adduct of benzo[a]pyrene (7S,8R)-diol (9R,10S)-epoxide in a DNA duplex.
Biochemistry, 39, 2000
6O2E
DownloadVisualize
BU of 6o2e by Molmil
GCN4 with asparagine at position 18
Descriptor: General control protein GCN4
Authors:Draper, S.R.E, Xiao, Q, Smith, M, Price, J.L.
Deposit date:2019-02-22
Release date:2019-06-26
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Influence of PEGylation on the Strength of Protein Surface Salt Bridges.
Acs Chem.Biol., 14, 2019
6O2F
DownloadVisualize
BU of 6o2f by Molmil
GCN4 with NPEG4 at position 18
Descriptor: General control protein GCN4
Authors:Draper, S.R.E, Xiao, Q, Smith, M, Price, J.L.
Deposit date:2019-02-22
Release date:2019-06-26
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Influence of PEGylation on the Strength of Protein Surface Salt Bridges.
Acs Chem.Biol., 14, 2019
7PD3
DownloadVisualize
BU of 7pd3 by Molmil
Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP
Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Chandrasekaran, V, Desai, N, Burton, N.O, Yang, H, Price, J, Miska, E.A, Ramakrishnan, V.
Deposit date:2021-08-04
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Visualizing formation of the active site in the mitochondrial ribosome.
Elife, 10, 2021
6OMB
DownloadVisualize
BU of 6omb by Molmil
Cdc48 Hexamer (Subunits A to E) with substrate bound to the central pore
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ...
Authors:Cooney, I, Han, H, Stewart, M, Carson, R.H, Hansen, D, Price, J.C, Hill, C.P, Shen, P.S.
Deposit date:2019-04-18
Release date:2019-07-17
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the Cdc48 segregase in the act of unfolding an authentic substrate.
Science, 365, 2019
6OPC
DownloadVisualize
BU of 6opc by Molmil
Cdc48 Hexamer in a complex with substrate and Shp1(Ubx Domain)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ...
Authors:Cooney, I, Han, H, Stewart, M, Carson, R.H, Hansen, D, Price, J.C, Hill, C.P, Shen, P.S.
Deposit date:2019-04-24
Release date:2019-07-10
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the Cdc48 segregase in the act of unfolding an authentic substrate.
Science, 365, 2019
6OVU
DownloadVisualize
BU of 6ovu by Molmil
Coiled-coil Trimer with Glu:3,4-difluorophenylalanine:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:3,4-difluorophenylalanine:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-08
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6OV9
DownloadVisualize
BU of 6ov9 by Molmil
Coiled-coil Trimer with Glu:p-nitrophenylalanine:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:p-nitrophenylalanine:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-07
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6OVS
DownloadVisualize
BU of 6ovs by Molmil
Coiled-coil Trimer with Glu:Tyr:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:Tyr:Lys Triad, PENTAETHYLENE GLYCOL
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-08
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6OSD
DownloadVisualize
BU of 6osd by Molmil
Coiled-coil Trimer with Glu:Phe:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:Phe:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-01
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6Q1W
DownloadVisualize
BU of 6q1w by Molmil
Coiled-coil Trimer with Glu:Val:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:Val:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-08-06
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (1.498 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6OVV
DownloadVisualize
BU of 6ovv by Molmil
Coiled-coil Trimer with Glu:4-pyridinylalanine:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:4-pyridinylalanine:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-08
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6OS8
DownloadVisualize
BU of 6os8 by Molmil
Coiled-coil Trimer with Glu:p-fluorophenylalanine:Lys Triad
Descriptor: Coiled-coil trimer with Glu:p-fluorophenylalanine:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-01
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6Q22
DownloadVisualize
BU of 6q22 by Molmil
Coiled-coil Trimer with Glu:Aminobutyric acid:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:Aminobutyric acid:Lys Triad, PENTAETHYLENE GLYCOL
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-08-06
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6Q25
DownloadVisualize
BU of 6q25 by Molmil
Coiled-coil Trimer with Glu:Leu:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:Leu:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-08-06
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (1.893 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020

 

12>

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon