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PDB: 17 results

5D9S
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BU of 5d9s by Molmil
Structure of HLA-A2:01 with the 11-mer peptide F11V
Descriptor: 11-mer peptide F11V, Beta-2-microglobulin, GLYCEROL, ...
Authors:Remesh, S.G, Zajonc, D.M.
Deposit date:2015-08-19
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.
Elife, 5, 2016
6O8Q
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BU of 6o8q by Molmil
HUaa 19bp SYM DNA pH 4.5
Descriptor: DNA (57-MER), DNA-binding protein HU-alpha
Authors:Remesh, S.G, Hammel, M.
Deposit date:2019-03-11
Release date:2020-03-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.216 Å)
Cite:Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Nat Commun, 11, 2020
6OAJ
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BU of 6oaj by Molmil
HUaE34K 19bp SYM DNA
Descriptor: DNA (5'-D(P*CP*GP*GP*TP*TP*CP*AP*AP*TP*TP*GP*GP*CP*AP*CP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*GP*TP*GP*CP*CP*AP*AP*TP*TP*GP*AP*AP*CP*CP*GP*C)-3'), DNA-binding protein HU-alpha
Authors:Remesh, S.G, Hammel, M.
Deposit date:2019-03-16
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.092 Å)
Cite:Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Nat Commun, 11, 2020
6O6K
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BU of 6o6k by Molmil
HUaa 19bp SYM DNA pH 5.5
Descriptor: DNA (5'-D(P*AP*TP*TP*TP*CP*AP*TP*GP*AP*T)-3'), DNA (5'-D(P*CP*AP*TP*CP*AP*TP*GP*AP*AP*A)-3'), DNA-binding protein HU-alpha
Authors:Remesh, S.G, Hammel, M.
Deposit date:2019-03-06
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.601 Å)
Cite:Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Nat Commun, 11, 2020
5ENW
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BU of 5enw by Molmil
Structure of HLA-A2:01 with peptide G9L
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Remesh, S.G, Zajonc, D.M.
Deposit date:2015-11-09
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
5FA4
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BU of 5fa4 by Molmil
Structure of HLA-A2:01 with peptide Y16R
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Remesh, S.G, Zajonc, D.M.
Deposit date:2015-12-10
Release date:2016-12-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
5DDH
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BU of 5ddh by Molmil
Structure of HLA-A2:01 with the 12-mer peptide F12K
Descriptor: 12-mer peptide F12K, Beta-2-microglobulin, GLYCEROL, ...
Authors:Remesh, S.G, Zajonc, D.
Deposit date:2015-08-24
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.
Elife, 5, 2016
5F9J
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BU of 5f9j by Molmil
Structure of HLA-A2:01 with peptide Y9L
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Remesh, S.G, Zajonc, D.M.
Deposit date:2015-12-09
Release date:2016-12-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
5BVI
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BU of 5bvi by Molmil
X-ray Structure of Interferon Regulatory Factor 4 IAD Domain
Descriptor: CHLORIDE ION, Interferon regulatory factor 4
Authors:Escalate, C.R, Remesh, S.G.
Deposit date:2015-06-05
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Studies of IRF4 Reveal a Flexible Autoinhibitory Region and a Compact Linker Domain.
J.Biol.Chem., 290, 2015
8DV1
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BU of 8dv1 by Molmil
SARS-CoV-2 Wuhan-hu-1-Spike-RBD bound to linker variant of affinity matured ACE2 mimetic CVD432
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Immunoglobulin gamma-1 heavy chain fusion,Immunoglobulin gamma-1 heavy chain, Spike glycoprotein
Authors:QCRG Structural Biology Consortium, Remesh, S.G, Merz, G.E, Brilot, A.F, Chio, U, Verba, K.A.
Deposit date:2022-07-27
Release date:2022-08-31
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps.
Structure, 31, 2023
8DV2
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BU of 8dv2 by Molmil
SARS-CoV-2 Wuhan-hu-1-Spike-RBD bound to computationally engineered ACE2 mimetic CVD293
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Immunoglobulin gamma-1 heavy chain fusion, Spike glycoprotein
Authors:QCRG Structural Biology Consortium, Remesh, S.G, Merz, G.E, Brilot, A.F, Chio, U, Verba, K.A.
Deposit date:2022-07-27
Release date:2022-08-31
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps.
Structure, 31, 2023
4LNM
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BU of 4lnm by Molmil
Structure of Escherichia coli Threonine Aldolase in Complex with Serine
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Safo, M.K, Contestabile, R, Remesh, S.G.
Deposit date:2013-07-11
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:On the catalytic mechanism and stereospecificity of Escherichia coli l-threonine aldolase.
Febs J., 281, 2014
4LNJ
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BU of 4lnj by Molmil
Structure of Escherichia coli Threonine Aldolase in Unliganded Form
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Low-specificity L-threonine aldolase, ...
Authors:Safo, M.K, Contestabile, R, Remesh, S.G.
Deposit date:2013-07-11
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:On the catalytic mechanism and stereospecificity of Escherichia coli l-threonine aldolase.
Febs J., 281, 2014
5F7D
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BU of 5f7d by Molmil
Structure of HLA-A2:01 with peptide G11N
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Zajonc, D.M, Remesh, S.G.
Deposit date:2015-12-07
Release date:2016-12-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
5FDW
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BU of 5fdw by Molmil
Structure of HLA-A2:01 with peptide Y10L
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Zajonc, D.M, Remesh, S.G.
Deposit date:2015-12-16
Release date:2016-12-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
5EOT
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BU of 5eot by Molmil
Structure of HLA-A2:01 with peptide G13E
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Zajonc, D.M, Remesh, S.G.
Deposit date:2015-11-10
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
5FA3
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BU of 5fa3 by Molmil
Structure of HLA-A2:01 with peptide G9V
Descriptor: Beta-2-microglobulin, G9V, GLYCEROL, ...
Authors:Zajonc, D.M, Remesh, S.G.
Deposit date:2015-12-10
Release date:2016-12-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017

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PDB entries from 2024-08-21

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