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PDB: 22 件
7TQV
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BU of 7tqv by Molmil
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
分子名称: RNA (33-MER), Uridylate-specific endoribonuclease
著者Frazier, M.N, Krahn, J.M, Butay, K.J, Dillard, L.B, Borgnia, M.J, Stanley, R.E.
登録日2022-01-27
公開日2022-03-23
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Flipped over U: structural basis for dsRNA cleavage by the SARS-CoV-2 endoribonuclease.
Nucleic Acids Res., 50, 2022
7TJ2
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BU of 7tj2 by Molmil
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
分子名称: RNA (31-MER), Uridylate-specific endoribonuclease nsp15
著者Frazier, M.N, Krahn, J.M, Butay, K.J, Dillard, L.B, Borgnia, M.J, Stanley, R.E.
登録日2022-01-14
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Flipped over U: structural basis for dsRNA cleavage by the SARS-CoV-2 endoribonuclease.
Nucleic Acids Res., 50, 2022
7N06
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BU of 7n06 by Molmil
SARS-CoV-2 Nsp15 endoribonuclease post-cleavage state
分子名称: RNA (5'-R(*AP*UP*A)-3'), Uridylate-specific endoribonuclease
著者Frazier, M.N, Dillard, L.B, Krahn, J.M, Stanley, R.E.
登録日2021-05-25
公開日2021-06-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Characterization of SARS2 Nsp15 nuclease activity reveals it's mad about U.
Nucleic Acids Res., 49, 2021
7N33
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BU of 7n33 by Molmil
SARS-CoV-2 Nsp15 endoribonuclease pre-cleavage state
分子名称: RNA (5'-R(*A)-D(*(UFT))-R(P*A)-3'), Uridylate-specific endoribonuclease
著者Frazier, M.N, Dillard, L.B, Krahn, J.M, Stanley, R.E.
登録日2021-05-31
公開日2021-06-09
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Characterization of SARS2 Nsp15 nuclease activity reveals it's mad about U.
Nucleic Acids Res., 49, 2021
4DO2
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BU of 4do2 by Molmil
Crystal Structure of the Rop protein mutant D30P/A31G at resolution 1.4 resolution.
分子名称: Regulatory protein rop
著者Amprazi, M, Kapetaniou, E.G, Kokkinidis, M.
登録日2012-02-09
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Structural plasticity of 4-alpha-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
5WF1
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BU of 5wf1 by Molmil
Tepsin VHS/ENTHlike domain SeMet
分子名称: Uncharacterized protein
著者Frazier, M.N, Monken, A.E, Jackson, L.P.
登録日2017-07-11
公開日2017-07-26
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Structure and evolution of ENTH and VHS/ENTH-like domains in tepsin.
Traffic, 18, 2017
5WF2
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BU of 5wf2 by Molmil
Tepsin VHS/ENTH-like Native
分子名称: Uncharacterized protein
著者Frazier, M.N, Monken, A.E, Jackson, L.P.
登録日2017-07-11
公開日2017-07-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Structure and evolution of ENTH and VHS/ENTH-like domains in tepsin.
Traffic, 18, 2017
6HYL
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BU of 6hyl by Molmil
Structure of PCM1 LIR motif bound to GABARAP
分子名称: Pericentriolar material 1 protein,Gamma-aminobutyric acid receptor-associated protein
著者Mouilleron, S, Wirth, M, Zhang, W, O'Reilly, N, Tooze, S, Johansen, T, Razi, M, Nyoni, L, Joshi, D.
登録日2018-10-22
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.559 Å)
主引用文献Molecular determinants regulating selective binding of autophagy adapters and receptors to ATG8 proteins.
Nat Commun, 10, 2019
6HYO
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BU of 6hyo by Molmil
Structure of ULK1 LIR motif bound to GABARAP
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Mouilleron, S, Wirth, M, Zhang, W, O'Reilly, N, Tooze, S, Johansen, T, Razi, M, Nyoni, L, Joshi, D.
登録日2018-10-22
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Molecular determinants regulating selective binding of autophagy adapters and receptors to ATG8 proteins.
Nat Commun, 10, 2019
6HYM
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BU of 6hym by Molmil
Structure of PCM1 LIR motif bound to GABARAP
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Pericentriolar material 1 protein,Gamma-aminobutyric acid receptor-associated protein
著者Mouilleron, S, Wirth, M, Zhang, W, O'Reilly, N, Tooze, S, Johansen, T, Razi, M, Nyoni, L, Joshi, D.
登録日2018-10-22
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Molecular determinants regulating selective binding of autophagy adapters and receptors to ATG8 proteins.
Nat Commun, 10, 2019
6HYN
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BU of 6hyn by Molmil
Structure of ATG13 LIR motif bound to GABARAP
分子名称: Autophagy-related protein 13,Gamma-aminobutyric acid receptor-associated protein
著者Mouilleron, S, Wirth, M, Zhang, W, O'Reilly, N, Tooze, S, Johansen, T, Razi, M, Nyoni, L, Joshi, D.
登録日2018-10-22
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Molecular determinants regulating selective binding of autophagy adapters and receptors to ATG8 proteins.
Nat Commun, 10, 2019
4WN4
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BU of 4wn4 by Molmil
Crystal structure of designed cPPR-polyA protein
分子名称: Pentatricopeptide repeat protein
著者Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O.
登録日2014-10-10
公開日2014-12-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.85 Å)
主引用文献An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4WSL
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BU of 4wsl by Molmil
Crystal structure of designed cPPR-polyC protein
分子名称: Pentatricopeptide repeat protein
著者Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O.
登録日2014-10-28
公開日2014-12-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4PJQ
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BU of 4pjq by Molmil
Crystal structure of designed cPPR-polyG protein
分子名称: Pentatricopeptide repeat protein
著者Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O.
登録日2014-05-12
公開日2014-12-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.353 Å)
主引用文献An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4PJS
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BU of 4pjs by Molmil
Crystal structure of designed (SeMet)-cPPR-NRE protein
分子名称: CALCIUM ION, Pentatricopeptide repeat protein
著者Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O.
登録日2014-05-12
公開日2014-12-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
1IBD
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BU of 1ibd by Molmil
X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT V29A
分子名称: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION
著者Stroppolo, M.E, Pesce, A, D'Orazio, M, O'Neill, P, Bordo, D, Rosano, C, Milani, M, Battistoni, A, Bolognesi, M, Desideri, A.
登録日2001-03-28
公開日2001-05-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase.
J.Mol.Biol., 308, 2001
1IBB
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BU of 1ibb by Molmil
X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT W83F
分子名称: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION
著者Stroppolo, M.E, Pesce, A, D'Orazio, M, O'Neill, P, Bordo, D, Rosano, C, Milani, M, Battistoni, A, Bolognesi, M, Desideri, A.
登録日2001-03-28
公開日2001-05-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase.
J.Mol.Biol., 308, 2001
1IBF
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BU of 1ibf by Molmil
X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT V29G
分子名称: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION
著者Stroppolo, M.E, Pesce, A, D'Orazio, M, O'Neill, P, Bordo, D, Rosano, C, Milani, M, Battistoni, A, Bolognesi, M, Desideri, A.
登録日2001-03-28
公開日2001-05-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase.
J.Mol.Biol., 308, 2001
1IBH
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BU of 1ibh by Molmil
X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT M41I
分子名称: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION
著者Stroppolo, M.E, Pesce, A, D'Orazio, M, O'Neill, P, Bordo, D, Rosano, C, Milani, M, Battistoni, A, Bolognesi, M, Desideri, A.
登録日2001-03-28
公開日2001-05-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase.
J.Mol.Biol., 308, 2001
1IB5
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BU of 1ib5 by Molmil
X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT W83Y
分子名称: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION
著者Stroppolo, M.E, Pesce, A, D'Orazio, M, O'Neill, P, Bordo, D, Rosano, C, Milani, M, Battistoni, A, Bolognesi, M, Desideri, A.
登録日2001-03-27
公開日2001-05-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase.
J.Mol.Biol., 308, 2001
4PJR
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BU of 4pjr by Molmil
Crystal structure of designed cPPR-NRE protein
分子名称: MAGNESIUM ION, Pentatricopeptide repeat protein
著者Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O.
登録日2014-05-12
公開日2014-12-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
1G37
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BU of 1g37 by Molmil
CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN COMPLEXED WITH BCH-10556 AND EXOSITE-DIRECTED PEPTIDE
分子名称: 3-(4-AMINO-CYCLOHEXYL)-2-HYDROXY-3-[(4-OXO-2-PHENYLMETHANESULFONYL-1,2,3,4-TETRAHYDRO-PYRROLO[1,2-A]PYRAZINE-6-CARBONYL)-AMINO]-PROPIONIC ACID BUTYL ESTER, ALPHA THROMBIN, THROMBIN NONAPEPTIDE INHIBITOR
著者Bachand, B, Tarazi, M, St-Denis, Y, Edmunds, J.J, Winocour, P.D, Leblond, L, Siddiqui, M.A.
登録日2000-10-23
公開日2001-04-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Potent and selective bicyclic lactam inhibitors of thrombin. Part 4: transition state inhibitors.
Bioorg.Med.Chem.Lett., 11, 2001

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