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PDB: 90 件

2BLW
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Trypsin after a high dose X-ray "Burn"
分子名称: BENZAMIDINE, CALCIUM ION, GLYCEROL, ...
著者Nanao, M.H, Ravelli, R.B.
登録日2005-03-08
公開日2005-09-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Improving Radiation-Damage Substructures for Rip.
Acta Crystallogr.,Sect.D, 61, 2005
1QIO
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BU of 1qio by Molmil
SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE CAUSED BY INTENSE SYNCHROTRON RADIATION TO HEN EGG WHITE LYSOZYME
分子名称: CHLORIDE ION, LYSOZYME, SODIUM ION
著者Kryger, G, Weik, M, Ravelli, R.B.
登録日1999-06-14
公開日2001-04-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Specific chemical and structural damage to proteins produced by synchrotron radiation.
Proc.Natl.Acad.Sci.USA, 97, 2000
2BN1
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Insulin after a high dose x-ray burn
分子名称: INSULIN A CHAIN, INSULIN B CHAIN
著者Nanao, M.H, Ravelli, R.B.
登録日2005-03-18
公開日2005-09-07
最終更新日2013-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Improving Radiation-Damage Substructures for Rip.
Acta Crystallogr.,Sect.D, 61, 2005
8AEY
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BU of 8aey by Molmil
3 A CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS FERRITIN FROM TIMEPIX3 detector
分子名称: Ferritin BfrB
著者Zhang, Y, van Schayck, J.P, Knoops, K, Peters, P.J, Ravelli, R.B.G.
登録日2022-07-14
公開日2023-01-18
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Integration of an Event-driven Timepix3 Hybrid Pixel Detector into a Cryo-EM Workflow
Microsc Microanal, 2023
8AKO
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BU of 8ako by Molmil
Structure of EspB-EspK complex: the non-identical twin of the PE-PPE-EspG secretion mechanism.
分子名称: ESX-1 secretion-associated protein EspB, ESX-1 secretion-associated protein EspK
著者Gijsbers, A, Eymery, M, Menart, I, Vinciauskaite, V, Gao, Y, Siliqi, D, Peters, P, Mccarthy, A, Ravelli, R.B.G.
登録日2022-07-30
公開日2022-12-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.293 Å)
主引用文献The crystal structure of the EspB-EspK virulence factor-chaperone complex suggests an additional type VII secretion mechanism in Mycobacterium tuberculosis.
J.Biol.Chem., 299, 2022
6R4R
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Cryo-EM Structure of the PI3-Kinase SH3 Domain Amyloid Fibril
分子名称: Phosphatidylinositol 3-kinase regulatory subunit alpha
著者Roeder, C, Vettore, N, Mangels, L.N, Gremer, L, Ravelli, R.B.G, Willbold, D, Hoyer, W, Buell, A.K, Schroder, G.F.
登録日2019-03-23
公開日2019-08-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Atomic structure of PI3-kinase SH3 amyloid fibrils by cryo-electron microscopy.
Nat Commun, 10, 2019
1AX9
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ACETYLCHOLINESTERASE COMPLEXED WITH EDROPHONIUM, LAUE DATA
分子名称: ACETYLCHOLINESTERASE, EDROPHONIUM ION
著者Raves, M.L, Ravelli, R.B.G, Sussman, J.L, Harel, M, Silman, I.
登録日1997-11-03
公開日1998-02-11
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Static Laue diffraction studies on acetylcholinesterase.
Acta Crystallogr.,Sect.D, 54, 1998
8QQK
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BU of 8qqk by Molmil
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, ...
著者Gao, Y, Zhang, Y, Hakke, S, Peters, P.J, Ravelli, R.B.G.
登録日2023-10-05
公開日2024-04-24
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM structure of cytochrome bo 3 quinol oxidase assembled in peptidiscs reveals an "open" conformation for potential ubiquinone-8 release.
Biochim Biophys Acta Bioenerg, 1865, 2024
5M3L
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BU of 5m3l by Molmil
Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris hemoglobin
分子名称: Extracellular globin-2, Extracellular globin-3, Extracellular globin-4, ...
著者Afanasyev, P, Linnemayr-Seer, C, Ravelli, R.B.G, Matadeen, R, De Carlo, S, Alewijnse, B, Portugal, R.V, Pannu, N.S, Schatz, M, van Heel, M.
登録日2016-10-15
公開日2017-09-13
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris haemoglobin.
IUCrJ, 4, 2017
8FFR
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BU of 8ffr by Molmil
Revised structure of the rabies virus nucleoprotein-RNA complex
分子名称: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
著者Leyrat, C, Bourhis, J.M, Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H, Jamin, M.
登録日2022-12-09
公開日2023-01-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
Viruses, 14, 2022
7O6E
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BU of 7o6e by Molmil
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
分子名称: Ferritin BfrB
著者Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
登録日2021-04-10
公開日2021-05-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021
6Y1A
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BU of 6y1a by Molmil
Amyloid fibril structure of islet amyloid polypeptide
分子名称: AMINO GROUP, Islet amyloid polypeptide
著者Roeder, C, Kupreichyk, T, Gremer, L, Schaefer, L.U, Pothula, K.R, Ravelli, R.B.G, Willbold, D, Hoyer, W, Schroder, G.F.
登録日2020-02-11
公開日2020-03-04
最終更新日2020-07-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of islet amyloid polypeptide fibrils reveals similarities with amyloid-beta fibrils.
Nat.Struct.Mol.Biol., 27, 2020
2W9J
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BU of 2w9j by Molmil
The crystal structure of SRP14 from the Schizosaccharomyces pombe signal recognition particle
分子名称: SIGNAL RECOGNITION PARTICLE SUBUNIT SRP14
著者Brooks, M.A, Ravelli, R.B.G, McCarthy, A.A, Strub, K, Cusack, S.
登録日2009-01-25
公開日2009-02-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of Srp14 from the Schizosaccharomyces Pombe Signal Recognition Particle.
Acta Crystallogr.,Sect.D, 65, 2009
3KQ0
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BU of 3kq0 by Molmil
Crystal structure of human alpha1-acid glycoprotein
分子名称: (2R)-2,3-dihydroxypropyl acetate, Alpha-1-acid glycoprotein 1, CHLORIDE ION
著者Schiefner, A, Schonfeld, D.L, Ravelli, R.B.G, Mueller, U, Skerra, A.
登録日2009-11-17
公開日2010-02-02
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The 1.8-A crystal structure of alpha1-acid glycoprotein (Orosomucoid) solved by UV RIP reveals the broad drug-binding activity of this human plasma lipocalin.
J.Mol.Biol., 384, 2008
7P0Z
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BU of 7p0z by Molmil
2.43 A Mycobacterium marinum EspB.
分子名称: ESX-1 secretion-associated protein EspB
著者Gijsbers, A, Zhang, Y, Vinciauskaite, V, Siroy, A, Ye, G, Tria, G, Mathew, A, Sanchez-Puig, N, Lopez-Iglesias, C, Peters, P.J, Ravelli, R.B.G.
登録日2021-07-01
公開日2021-08-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献Priming mycobacterial ESX-secreted protein B to form a channel-like structure.
Curr Res Struct Biol, 3, 2021
7P13
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BU of 7p13 by Molmil
2.29 A Mycobacterium tuberculosis EspB.
分子名称: ESX-1 secretion-associated protein EspB
著者Gijsbers, A, Zhang, Y, Vinciauskaite, V, Siroy, A, Gao, Y, Tria, G, Mathew, A, Sanchez-Puig, N, Lopez-Iglesias, C, Peters, P.J, Ravelli, R.B.G.
登録日2021-07-01
公開日2021-08-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献Priming mycobacterial ESX-secreted protein B to form a channel-like structure.
Curr Res Struct Biol, 3, 2021
7P1T
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BU of 7p1t by Molmil
Cryo-EM structure of encapsulin from Mycobacterium tuberculosis
分子名称: 29 kDa antigen, Cfp29
著者Lewis, C.J, Berger, C, Ravelli, R.B.G.
登録日2021-07-02
公開日2022-07-13
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献Encapsulins in mycobacteria: from single particle to in situ
To Be Published
1UWN
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BU of 1uwn by Molmil
The Initial Events in the Photocycle of Photoactive Yellow Protein: A Common Mechanism on Light Activation in Photoreceptor Proteins
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
著者Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
登録日2004-02-10
公開日2004-03-25
最終更新日2019-02-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
1UWP
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BU of 1uwp by Molmil
Initial Events in the Photocycle of Photoactive Yellow Protein
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
著者Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
登録日2004-02-11
公開日2006-05-10
最終更新日2019-02-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
2W6J
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BU of 2w6j by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 5.
分子名称: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
著者Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
登録日2008-12-18
公開日2009-10-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.84 Å)
主引用文献Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
2W6H
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BU of 2w6h by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 4A.
分子名称: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
著者Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
登録日2008-12-18
公開日2009-10-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
2W6F
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BU of 2w6f by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 2.
分子名称: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
著者Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
登録日2008-12-18
公開日2009-10-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
2W6I
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Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 4B.
分子名称: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
著者Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
登録日2008-12-18
公開日2009-10-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
1V04
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BU of 1v04 by Molmil
serum paraoxonase by directed evolution
分子名称: CALCIUM ION, PHOSPHATE ION, SERUM PARAOXONASE/ARYLESTERASE 1
著者Harel, M, Aharoni, A, Gaidukov, L, Brumshtein, B, Khersonsky, O, Yagur, S, Meged, R, Dvir, H, Ravelli, R.B.G, McCarthy, A, Toker, L, Silman, I, Sussman, J.L, Tawfik, D.S.
登録日2004-03-22
公開日2004-04-23
最終更新日2017-03-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and Evolution of the Serum Paraoxonase Family of Detoxifying and Anti-Atherosclerotic Enzymes
Nat.Struct.Mol.Biol., 11, 2004
2W6E
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Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration:hydration state 1.
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ...
著者Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
登録日2008-12-18
公開日2009-10-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (6.5 Å)
主引用文献Improving Diffraction by Humidity Control: A Novel Device Compatible with X-Ray Beamlines.
Acta Crystallogr.,Sect.D, 65, 2009

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