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PDB: 107 results

6YQ5
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Hybrid structure of the SPP1 tail tube by solid-state NMR and cryo EM - NMR Ensemble
Descriptor: Tail tube protein gp17.1*
Authors:Zinke, M, Sachowsky, K.A.A, Zinn-Justin, S, Ravelli, R, Schroder, G.F, Habeck, M, Lange, A.
Deposit date:2020-04-16
Release date:2020-10-14
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4 Å), SOLID-STATE NMR
Cite:Architecture of the flexible tail tube of bacteriophage SPP1.
Nat Commun, 11, 2020
7O6E
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2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
Descriptor: Ferritin BfrB
Authors:Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-04-10
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021
1ZZJ
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Structure of the third KH domain of hnRNP K in complex with 15-mer ssDNA
Descriptor: 5'-D(*TP*TP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*TP*TP*T)-3', Heterogeneous nuclear ribonucleoprotein K
Authors:Backe, P.H, Messias, A.C, Ravelli, R.B, Sattler, M, Cusack, S.
Deposit date:2005-06-14
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray Crystallographic and NMR Studies of the Third KH Domain of hnRNP K in Complex with Single-Stranded Nucleic Acids
STRUCTURE, 13, 2005
1UWN
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The Initial Events in the Photocycle of Photoactive Yellow Protein: A Common Mechanism on Light Activation in Photoreceptor Proteins
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
Authors:Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
Deposit date:2004-02-10
Release date:2004-03-25
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
1UWP
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Initial Events in the Photocycle of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
Authors:Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
Deposit date:2004-02-11
Release date:2006-05-10
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
7P0Z
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BU of 7p0z by Molmil
2.43 A Mycobacterium marinum EspB.
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Gijsbers, A, Zhang, Y, Vinciauskaite, V, Siroy, A, Ye, G, Tria, G, Mathew, A, Sanchez-Puig, N, Lopez-Iglesias, C, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-07-01
Release date:2021-08-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Priming mycobacterial ESX-secreted protein B to form a channel-like structure.
Curr Res Struct Biol, 3, 2021
7P13
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2.29 A Mycobacterium tuberculosis EspB.
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Gijsbers, A, Zhang, Y, Vinciauskaite, V, Siroy, A, Gao, Y, Tria, G, Mathew, A, Sanchez-Puig, N, Lopez-Iglesias, C, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-07-01
Release date:2021-08-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Priming mycobacterial ESX-secreted protein B to form a channel-like structure.
Curr Res Struct Biol, 3, 2021
1ZZK
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Crystal Structure of the third KH domain of hnRNP K at 0.95A resolution
Descriptor: Heterogeneous nuclear ribonucleoprotein K
Authors:Backe, P.H, Messias, A.C, Ravelli, R.B, Sattler, M, Cusack, S.
Deposit date:2005-06-14
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:X-Ray Crystallographic and NMR Studies of the Third KH Domain of hnRNP K in Complex with Single-Stranded Nucleic Acids
STRUCTURE, 13, 2005
2F1K
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Crystal structure of Synechocystis arogenate dehydrogenase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, prephenate dehydrogenase
Authors:Legrand, P, Dumas, R, Seux, M, Rippert, P, Ravelli, R, Ferrer, J.-L, Matringe, M.
Deposit date:2005-11-14
Release date:2006-05-09
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biochemical Characterization and Crystal Structure of Synechocystis Arogenate Dehydrogenase Provide Insights into Catalytic Reaction
Structure, 14, 2006
2IYK
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Crystal structure of the UPF2-interacting domain of nonsense mediated mRNA decay factor UPF1
Descriptor: REGULATOR OF NONSENSE TRANSCRIPTS 1, ZINC ION
Authors:Kadlec, J, Guilligay, D, Ravelli, R.B, Cusack, S.
Deposit date:2006-07-18
Release date:2006-08-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure of the Upf2-Interacting Domain of Nonsense-Mediated Mrna Decay Factor Upf1.
RNA, 12, 2006
2GTT
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BU of 2gtt by Molmil
Crystal structure of the rabies virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
Authors:Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H.
Deposit date:2006-04-28
Release date:2006-09-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Crystal Structure of the Rabies Virus Nucleoprotein-RNA Complex
Science, 313, 2006
2GD5
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Structural basis for budding by the ESCRTIII factor CHMP3
Descriptor: Charged multivesicular body protein 3
Authors:Muziol, T.M, Pineda-Molina, E, Ravelli, R.B, Zamborlini, A, Usami, Y, Gottlinger, H, Weissenhorn, W.
Deposit date:2006-03-15
Release date:2006-06-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Budding by the ESCRT-III Factor CHMP3.
Dev.Cell, 10, 2006
3CLC
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BU of 3clc by Molmil
Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator
Descriptor: 35-MER, MAGNESIUM ION, Regulatory protein
Authors:McGeehan, J.E, Streeter, S.D, Thresh, S.J, Ball, N, Ravelli, R.B, Kneale, G.G.
Deposit date:2008-03-18
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural analysis of the genetic switch that regulates the expression of restriction-modification genes.
Nucleic Acids Res., 36, 2008
2W6H
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BU of 2w6h by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 4A.
Descriptor: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
Authors:Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
Deposit date:2008-12-18
Release date:2009-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (5 Å)
Cite:Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
2W6F
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BU of 2w6f by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 2.
Descriptor: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
Authors:Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
Deposit date:2008-12-18
Release date:2009-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (6 Å)
Cite:Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
2W6J
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BU of 2w6j by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 5.
Descriptor: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
Authors:Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
Deposit date:2008-12-18
Release date:2009-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.84 Å)
Cite:Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
2W6I
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BU of 2w6i by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 4B.
Descriptor: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
Authors:Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
Deposit date:2008-12-18
Release date:2009-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
3E22
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BU of 3e22 by Molmil
Tubulin-colchicine-soblidotin: Stathmin-like domain complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Cormier, A, Marchand, M, Ravelli, R.B, Knossow, M, Gigant, B.
Deposit date:2008-08-05
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural insight into the inhibition of tubulin by vinca domain peptide ligands
Embo Rep., 9, 2008
3DU7
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BU of 3du7 by Molmil
Tubulin-colchicine-phomopsin A: Stathmin-like domain complex
Descriptor: 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Cormier, A, Marchand, M, Ravelli, R.B, Knossow, M, Gigant, B.
Deposit date:2008-07-17
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structural insight into the inhibition of tubulin by vinca domain peptide ligands
Embo Rep., 9, 2008
1V04
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BU of 1v04 by Molmil
serum paraoxonase by directed evolution
Descriptor: CALCIUM ION, PHOSPHATE ION, SERUM PARAOXONASE/ARYLESTERASE 1
Authors:Harel, M, Aharoni, A, Gaidukov, L, Brumshtein, B, Khersonsky, O, Yagur, S, Meged, R, Dvir, H, Ravelli, R.B.G, McCarthy, A, Toker, L, Silman, I, Sussman, J.L, Tawfik, D.S.
Deposit date:2004-03-22
Release date:2004-04-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Evolution of the Serum Paraoxonase Family of Detoxifying and Anti-Atherosclerotic Enzymes
Nat.Struct.Mol.Biol., 11, 2004
2W9J
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The crystal structure of SRP14 from the Schizosaccharomyces pombe signal recognition particle
Descriptor: SIGNAL RECOGNITION PARTICLE SUBUNIT SRP14
Authors:Brooks, M.A, Ravelli, R.B.G, McCarthy, A.A, Strub, K, Cusack, S.
Deposit date:2009-01-25
Release date:2009-02-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Srp14 from the Schizosaccharomyces Pombe Signal Recognition Particle.
Acta Crystallogr.,Sect.D, 65, 2009
1UUS
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BU of 1uus by Molmil
Structure of an activated Dictyostelium STAT in its DNA-unbound form
Descriptor: STAT PROTEIN
Authors:Soler-Lopez, M, Petosa, C, Fukuzawa, M, Ravelli, R, Williams, J.G, Muller, C.W.
Deposit date:2004-01-09
Release date:2004-03-26
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of an Activated Dictyostelium Stat in its DNA-Unbound Form
Mol.Cell, 13, 2004
1UUR
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Structure of an activated Dictyostelium STAT in its DNA-unbound form
Descriptor: STATA PROTEIN
Authors:Soler-Lopez, M, Petosa, C, Fukuzawa, M, Ravelli, R, Williams, J.G, Muller, C.W.
Deposit date:2004-01-09
Release date:2004-03-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of an Activated Dictyostelium Stat in its DNA-Unbound Form
Mol.Cell, 13, 2004
3I34
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Proteinase K by LB Nanotemplate Method after high X-Ray dose on ID14-2 Beamline at ESRF
Descriptor: CALCIUM ION, MERCURY (II) ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Ravelli, R, McSweeney, S, Nicolini, C.
Deposit date:2009-06-30
Release date:2010-06-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Radiation damage study of Proteinase K at ID14-2 beamline at ESRF
To be Published
3HKB
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Tubulin: RB3 Stathmin-like domain complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Dorleans, A, Gigant, B, Ravelli, R.B.G, Mailliet, P, Mikol, V, Knossow, M.
Deposit date:2009-05-23
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Variations in the colchicine-binding domain provide insight into the structural switch of tubulin
Proc.Natl.Acad.Sci.USA, 106, 2009

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