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PDB: 156 results

2AQO
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BU of 2aqo by Molmil
Crystal structure of E. coli Isoaspartyl Dipeptidase Mutant E77Q
Descriptor: Isoaspartyl dipeptidase, ZINC ION
Authors:Marti-Arbona, R, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2005-08-18
Release date:2005-12-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Functional significance of Glu-77 and Tyr-137 within the active site of isoaspartyl dipeptidase.
Bioorg.Chem., 33, 2005
2Q08
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BU of 2q08 by Molmil
Crystal structure of the protein BH0493 from Bacillus halodurans C-125 complexed with ZN
Descriptor: BH0493 protein, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Patskovsky, Y, Sauder, J.M, Burley, S.K, Raushel, F, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-05-21
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Glucoronate Isomerase from Bacillus halodurans.
To be Published
6WN6
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BU of 6wn6 by Molmil
Crystal structure of 3-keto-D-glucoside 4-epimerase, YcjR, from E. coli, apo form
Descriptor: 1,2-ETHANEDIOL, 3-keto-D-glucoside 4-epimerase, MANGANESE (II) ION
Authors:Mabanglo, M.F, Raushel, F.M, Mukherjee, K.
Deposit date:2020-04-22
Release date:2020-06-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure and Reaction Mechanism of YcjR, an Epimerase That Facilitates the Interconversion of d-Gulosides to d-Glucosides inEscherichia coli.
Biochemistry, 59, 2020
2Q01
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BU of 2q01 by Molmil
Crystal structure of glucuronate isomerase from Caulobacter crescentus
Descriptor: POTASSIUM ION, Uronate isomerase
Authors:Patskovsky, Y, Bonanno, J, Sridhar, V, Sauder, J.M, Freeman, J, Powell, A, Koss, J, Groshong, C, Gheyi, T, Wasserman, S.R, Raushel, F, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-05-18
Release date:2007-05-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal Structure of Glucuronate Isomerase from Caulobacter crescentus.
To be Published
7M15
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BU of 7m15 by Molmil
crystal structure of cj1430 in the presence of GDP-D-glycero-L-gluco-heptose, a GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from campylobacter jejuni
Descriptor: 1,2-ETHANEDIOL, GDP-D-glycero-L-gluco-heptose, [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4R,5R,6S)-6-[(1R)-1,2-dihydroxyethyl]-3,4,5-trihydroxyoxan-2-yl dihydrogen diphosphate (non-preferred name)
Authors:Girardi, N.M, Thoden, J.B, Raushel, F.M, Holden, H.M.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
8EWU
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BU of 8ewu by Molmil
X-ray structure of the GDP-6-deoxy-4-keto-D-lyxo-heptose-4-reductase from Campylobacter jejuni HS:15
Descriptor: 1,2-ETHANEDIOL, GDP-L-fucose synthase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Xiang, D.F, Ghosh, M.K, Riegert, A.S, Raushel, F.M, Holden, H.M.
Deposit date:2022-10-24
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bifunctional Epimerase/Reductase Enzymes Facilitate the Modulation of 6-Deoxy-Heptoses Found in the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 62, 2023
7M14
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BU of 7m14 by Molmil
x-ray structure of cj1430 in the presence of GDP, a GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from campylobacter jejuni
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, SODIUM ION, ...
Authors:Girardi, N.M, Thoden, J.B, Raushel, F.M, Holden, H.M.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
7M13
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BU of 7m13 by Molmil
Crystal structure of CJ1428, a GDP-D-GLYCERO-L-GLUCO-HEPTOSE SYNTHASE from campylobacter jejuni in the presence of NADPH
Descriptor: 1,2-ETHANEDIOL, GDP-L-fucose synthase, MAGNESIUM ION, ...
Authors:Anderson, T.K, Thoden, J.B, Raushel, F.M, Holden, H.M.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
1T36
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BU of 1t36 by Molmil
Crystal structure of E. coli carbamoyl phosphate synthetase small subunit mutant C248D complexed with uridine 5'-monophosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Carbamoyl-phosphate synthase large chain, ...
Authors:Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M.
Deposit date:2004-04-24
Release date:2004-09-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Long-range allosteric transitions in carbamoyl phosphate synthetase.
Protein Sci., 13, 2004
7US5
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BU of 7us5 by Molmil
X-ray crystal structure of GDP-D-glycero-D-manno-heptose 4,6-Dehydratase from Campylobacter jejuni
Descriptor: 1,2-ETHANEDIOL, GDP-D-GLYCERO-D-MANNO-HEPTOSE 4,6-DEHYDRATASE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-04-23
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reaction Mechanism and Three-Dimensional Structure of GDP-d-glycero-alpha-d-manno-heptose 4,6-Dehydratase from Campylobacter jejuni.
Biochemistry, 61, 2022
7KWS
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BU of 7kws by Molmil
Cj1441 with NAD+ and UDP-glucose
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Riegert, A.S, Raushel, F.M.
Deposit date:2020-12-02
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Functional and Structural Characterization of the UDP-Glucose Dehydrogenase Involved in Capsular Polysaccharide Biosynthesis from Campylobacter jejuni .
Biochemistry, 60, 2021
2AQV
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BU of 2aqv by Molmil
Crystal Structure of E. coli Isoaspartyl Dipeptidase mutant Y137F
Descriptor: Isoaspartyl dipeptidase, ZINC ION
Authors:Marti-Arbona, R, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2005-08-18
Release date:2005-12-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Functional significance of Glu-77 and Tyr-137 within the active site of isoaspartyl dipeptidase.
Bioorg.Chem., 33, 2005
5HRM
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BU of 5hrm by Molmil
Crystal structure of phosphotriesterase from Sphingobium sp. TCM1
Descriptor: Haloalkylphosphorus hydrolase, MANGANESE (II) ION
Authors:Mabanglo, M.F, Raushel, F.M.
Deposit date:2016-01-23
Release date:2016-07-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Structure of a Novel Phosphotriesterase from Sphingobium sp. TCM1: A Familiar Binuclear Metal Center Embedded in a Seven-Bladed beta-Propeller Protein Fold.
Biochemistry, 55, 2016
6VO6
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BU of 6vo6 by Molmil
Crystal Structure of Cj1427, an Essential NAD-dependent Dehydrogenase from Campylobacter jejuni, in the Presence of NADH and GDP
Descriptor: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, ...
Authors:Anderson, T.K, Spencer, K.D, Thoden, J.B, Huddleston, J.P, Raushel, F.M, Holden, H.M.
Deposit date:2020-01-30
Release date:2020-04-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Analysis of Cj1427, an Essential NAD-Dependent Dehydrogenase for the Biosynthesis of the Heptose Residues in the Capsular Polysaccharides ofCampylobacter jejuni.
Biochemistry, 59, 2020
6VO8
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BU of 6vo8 by Molmil
X-ray structure of the Cj1427 in the presence of NADH and GDP-D-glycero-D-mannoheptose, an essential NAD-dependent dehydrogenase from Campylobacter jejuni
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Putative sugar-nucleotide epimerase/dehydratease, [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{S},5~{S},6~{S})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate
Authors:Spencer, K.D, Anderson, T.K, Thoden, J.B, Huddleston, J.P, Raushel, F.M, Holden, H.M.
Deposit date:2020-01-30
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Analysis of Cj1427, an Essential NAD-Dependent Dehydrogenase for the Biosynthesis of the Heptose Residues in the Capsular Polysaccharides ofCampylobacter jejuni.
Biochemistry, 59, 2020
3BE7
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BU of 3be7 by Molmil
Crystal structure of Zn-dependent arginine carboxypeptidase
Descriptor: ARGININE, GLYCEROL, MAGNESIUM ION, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Freeman, J, Iizuka, M, Bain, K, Rodgers, L, Raushel, F, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-16
Release date:2007-11-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes.
Biochemistry, 48, 2009
4ZSU
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BU of 4zsu by Molmil
Crystal structure of Brevundimonas diminuta phosphotriesterase mutant L7eP-3aG
Descriptor: COBALT (II) ION, Parathion hydrolase
Authors:Mabanglo, M.F, Raushel, F.M.
Deposit date:2015-05-14
Release date:2015-09-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Variants of Phosphotriesterase for the Enhanced Detoxification of the Chemical Warfare Agent VR.
Biochemistry, 54, 2015
4ZST
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BU of 4zst by Molmil
Crystal structure of Brevundimonas diminuta phosphotriesterase mutant L7eP-3a
Descriptor: COBALT (II) ION, Parathion hydrolase
Authors:Mabanglo, M.F, Raushel, F.M.
Deposit date:2015-05-13
Release date:2015-09-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Variants of Phosphotriesterase for the Enhanced Detoxification of the Chemical Warfare Agent VR.
Biochemistry, 54, 2015
5IOJ
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BU of 5ioj by Molmil
Crystal structure of the Sphingobium sp. TCM1 phosphotriesterase without the binuclear manganese center
Descriptor: Haloalkylphosphorus hydrolase
Authors:Mabanglo, M.F, Raushel, F.M.
Deposit date:2016-03-08
Release date:2016-07-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of a Novel Phosphotriesterase from Sphingobium sp. TCM1: A Familiar Binuclear Metal Center Embedded in a Seven-Bladed beta-Propeller Protein Fold.
Biochemistry, 55, 2016
8V4G
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BU of 8v4g by Molmil
X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP and NADP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-DIPHOSPHATE, ...
Authors:Schumann, M.E, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2023-11-29
Release date:2023-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biosynthesis of Cytidine Diphosphate-6-d-Glucitol for the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 63, 2024
8V4H
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BU of 8v4h by Molmil
X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP-glucitol
Descriptor: CHLORIDE ION, PHOSPHATE ION, Putative nucleotide sugar dehydratase, ...
Authors:Thoden, J.B, Schumann, M.E, Holden, H.M, Raushel, F.M.
Deposit date:2023-11-29
Release date:2023-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biosynthesis of Cytidine Diphosphate-6-d-Glucitol for the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 63, 2024
6P3K
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BU of 6p3k by Molmil
Crystal structure of LigU(C100S)
Descriptor: (4E)-oxalomesaconate Delta-isomerase, CHLORIDE ION
Authors:Cory, S.A, Hogancamp, T.N, Raushel, F.M, Barondeau, D.P.
Deposit date:2019-05-23
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Biochemistry, 58, 2019
6P3H
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BU of 6p3h by Molmil
Crystal structure of LigU(K66M) bound to substrate
Descriptor: (1E)-4-oxobut-1-ene-1,2,4-tricarboxylic acid, (4E)-oxalomesaconate Delta-isomerase, CHLORIDE ION
Authors:Cory, S.A, Hogancamp, T.N, Raushel, F.M, Barondeau, D.P.
Deposit date:2019-05-23
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Biochemistry, 58, 2019
6P3J
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BU of 6p3j by Molmil
Crystal structure of LigU
Descriptor: (4E)-oxalomesaconate Delta-isomerase, CALCIUM ION, CHLORIDE ION, ...
Authors:Cory, S.A, Hogancamp, T.N, Raushel, F.M, Barondeau, D.P.
Deposit date:2019-05-23
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Biochemistry, 58, 2019
3DUG
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BU of 3dug by Molmil
Crystal structure of zn-dependent arginine carboxypeptidase complexed with zinc
Descriptor: ARGININE, GLYCEROL, ZINC ION, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Freeman, J, Iizuka, M, Bain, K, Rodgers, L, Raushel, F, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-17
Release date:2008-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes.
Biochemistry, 48, 2009

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