Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52 件

3AP2
DownloadVisualize
BU of 3ap2 by Molmil
Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP,C4 peptide, and phosphate ion
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ...
著者Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2: Insights into substrate-binding and catalysis of post-translational protein tyrosine sulfation
To be Published
3AP1
DownloadVisualize
BU of 3ap1 by Molmil
Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP and C4 peptide
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ...
著者Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction.
Nat Commun, 4, 2013
6LVR
DownloadVisualize
BU of 6lvr by Molmil
Crystal structure of the PPR domain of Arabidopsis thaliana protein-only RNase P 1 (PRORP1) in complex with tRNA
分子名称: Proteinaceous RNase P 1, chloroplastic/mitochondrial, yeast phenylalanine tRNA
著者Teramoto, T, Hall, T.M.T.
登録日2020-02-04
公開日2020-08-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Pentatricopeptide repeats of protein-only RNase P use a distinct mode to recognize conserved bases and structural elements of pre-tRNA.
Nucleic Acids Res., 48, 2020
3AP3
DownloadVisualize
BU of 3ap3 by Molmil
Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Protein-tyrosine sulfotransferase 2
著者Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction.
Nat Commun, 4, 2013
8KDA
DownloadVisualize
BU of 8kda by Molmil
Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs
分子名称: Aquifex aeolicus pre-tRNAVal, MAGNESIUM ION, RNA-free ribonuclease P
著者Teramoto, T, Adachi, N, Yokogawa, T, Koyasu, T, Mayanagi, K, Nakamura, T, Senda, T, Kakuta, Y.
登録日2023-08-09
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs
To Be Published
8KD9
DownloadVisualize
BU of 8kd9 by Molmil
Cryo-EM structure of Aquifex aeolicus minimal protein-only RNase P (HARP) in complex with pre-tRNAs
分子名称: Aquifex aeolicus pre-tRNAVal, RNA-free ribonuclease P
著者Teramoto, T, Koyasu, T, Mayanagi, K, Yokogawa, T, Adachi, N, Nakamura, T, Senda, T, Kakuta, Y.
登録日2023-08-09
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Cryo-EM structure of Aquifex aeolicus minimal protein-only RNase P (HARP) in complex with pre-tRNAs
To Be Published
7F3E
DownloadVisualize
BU of 7f3e by Molmil
Cryo-EM structure of the minimal protein-only RNase P from Aquifex aeolicus
分子名称: RNA-free ribonuclease P
著者Teramoto, T, Koyasu, T, Adachi, N, Kawasaki, M, Moriya, T, Numata, T, Senda, T, Kakuta, Y.
登録日2021-06-16
公開日2021-08-11
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Minimal protein-only RNase P structure reveals insights into tRNA precursor recognition and catalysis.
J.Biol.Chem., 297, 2021
5UZG
DownloadVisualize
BU of 5uzg by Molmil
Crystal structure of Glorund qRRM1 domain
分子名称: AT27789p, GLYCEROL, SULFATE ION
著者Teramoto, T, Hall, T.M.T.
登録日2017-02-26
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.541 Å)
主引用文献The Drosophila hnRNP F/H Homolog Glorund Uses Two Distinct RNA-Binding Modes to Diversify Target Recognition.
Cell Rep, 19, 2017
5UZN
DownloadVisualize
BU of 5uzn by Molmil
Crystal structure of Glorund qRRM3 domain
分子名称: AT27789p, GLYCEROL, SULFATE ION
著者Teramoto, T, Hall, T.M.T.
登録日2017-02-27
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The Drosophila hnRNP F/H Homolog Glorund Uses Two Distinct RNA-Binding Modes to Diversify Target Recognition.
Cell Rep, 19, 2017
5UZM
DownloadVisualize
BU of 5uzm by Molmil
Crystal structure of Glorund qRRM2 domain
分子名称: AT27789p
著者Teramoto, T, Hall, T.M.T.
登録日2017-02-27
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.552 Å)
主引用文献The Drosophila hnRNP F/H Homolog Glorund Uses Two Distinct RNA-Binding Modes to Diversify Target Recognition.
Cell Rep, 19, 2017
7EOV
DownloadVisualize
BU of 7eov by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT2A8 in complex with PAP and cholic acid
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, CHOLIC ACID, cytosolic sulfotransferase SULT2A8
著者Teramoto, T, Nishio, T, Kakuta, Y.
登録日2021-04-22
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The crystal structure of mouse SULT2A8 reveals the mechanism of 7 alpha-hydroxyl, bile acid sulfation.
Biochem.Biophys.Res.Commun., 562, 2021
7V1O
DownloadVisualize
BU of 7v1o by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT3A1
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Amine sulfotransferase, naphthalen-1-amine
著者Teramoto, T, Inada, K, Kakuta, Y.
登録日2021-08-05
公開日2022-08-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of SULT3A1, mouse amine N-sulfotransferase
To Be Published
2ZPT
DownloadVisualize
BU of 2zpt by Molmil
Crystal structure of mouse sulfotransferase SULT1D1 complex with PAP
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, Tyrosine-ester sulfotransferase
著者Teramoto, T, Sakakibara, Y, Inada, K, Liu, M.C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2008-07-28
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structure of mSULT1D1, a mouse catecholamine sulfotransferase
Febs Lett., 582, 2008
2ZVQ
DownloadVisualize
BU of 2zvq by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and alpha-naphthol
分子名称: 1-NAPHTHOL, ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2008-11-14
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for the broad range substrate specificity of a novel mouse cytosolic sulfotransferase--mSULT1D1
Biochem.Biophys.Res.Commun., 379, 2009
2ZYV
DownloadVisualize
BU of 2zyv by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS/PAP and p-nitrophenol
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, GLYCEROL, P-NITROPHENOL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
2ZVP
DownloadVisualize
BU of 2zvp by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and p-nitrophenol
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, P-NITROPHENOL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2008-11-14
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for the broad range substrate specificity of a novel mouse cytosolic sulfotransferase--mSULT1D1
Biochem.Biophys.Res.Commun., 379, 2009
2ZYU
DownloadVisualize
BU of 2zyu by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS and p-nitrophenyl sulfate
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, 4-nitrophenyl sulfate, GLYCEROL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
2ZYW
DownloadVisualize
BU of 2zyw by Molmil
crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and p-nitrophenol, obtained by two-step soaking method
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, P-NITROPHENOL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
2ZYT
DownloadVisualize
BU of 2zyt by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, GLYCEROL, Tyrosine-ester sulfotransferase
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
1Z2T
DownloadVisualize
BU of 1z2t by Molmil
NMR structure study of anchor peptide Ser65-Leu87 of enzyme acholeplasma laidlawii Monoglycosyldiacyl Glycerol Synthase (alMGS) in DHPC micelles
分子名称: Anchor peptide Ser65-Leu87 of alMGS
著者Lind, J, Barany-Wallje, E, Ramo, T, Wieslander, A, Maler, L.
登録日2005-03-09
公開日2006-03-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure, position of and membrane-interaction of a putative membrane-anchoring domain of alMGS
To be Published
6KZR
DownloadVisualize
BU of 6kzr by Molmil
Crystal structure of mouse DCAR2 CRD domain
分子名称: C-type lectin domain family 4, member b1, CALCIUM ION, ...
著者Omahdi, Z, Horikawa, Y, Toyonaga, K, Teramoto, T, Kakuta, Y, Yamasaki, S.
登録日2019-09-25
公開日2020-03-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Structural insight into the recognition of pathogen-derived phosphoglycolipids by C-type lectin receptor DCAR.
J.Biol.Chem., 295, 2020
8J12
DownloadVisualize
BU of 8j12 by Molmil
Cryo-EM structure of the AsCas12f-sgRNA-target DNA ternary complex
分子名称: DNA (38-MER), MAGNESIUM ION, RNA (247-MER), ...
著者Hino, T, Omura, N.S, Nakagawa, R, Togashi, T, Takeda, N.S, Hiramoto, T, Tasaka, S, Hirano, H, Tokuyama, T, Uosaki, H, Ishiguro, H, Yamano, H, Ozaki, Y, Motooka, D, Mori, H, Kirita, Y, Kise, Y, Itoh, Y, Matoba, S, Aburatani, H, Yachie, N, Siksnys, V, Ohmori, T, Hoshino, A, Nureki, O.
登録日2023-04-12
公開日2023-09-27
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献An AsCas12f-based compact genome-editing tool derived by deep mutational scanning and structural analysis.
Cell, 186, 2023
8J1J
DownloadVisualize
BU of 8j1j by Molmil
Cryo-EM structure of the AsCas12f-YHAM-sgRNAS3-5v7-target DNA
分子名称: DNA (38-MER), MAGNESIUM ION, RNA (118-MER), ...
著者Hino, T, Omura, N.S, Nakagawa, R, Togashi, T, Takeda, N.S, Hiramoto, T, Tasaka, S, Hirano, H, Tokuyama, T, Uosaki, H, Ishiguro, H, Yamano, H, Ozaki, Y, Motooka, D, Mori, H, Kirita, Y, Kise, Y, Itoh, Y, Matoba, S, Aburatani, H, Yachie, N, Siksnys, V, Ohmori, T, Hoshino, A, Nureki, O.
登録日2023-04-13
公開日2023-09-27
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献An AsCas12f-based compact genome-editing tool derived by deep mutational scanning and structural analysis.
Cell, 186, 2023
8J3R
DownloadVisualize
BU of 8j3r by Molmil
Cryo-EM structure of the AsCas12f-HKRA-sgRNAS3-5v7-target DNA
分子名称: DNA (37-MER), DNA (38-MER), MAGNESIUM ION, ...
著者Hino, T, Omura, N.S, Nakagawa, R, Togashi, T, Takeda, N.S, Hiramoto, T, Tasaka, S, Hirano, H, Tokuyama, T, Uosaki, H, Ishiguro, H, Yamano, H, Ozaki, Y, Motooka, D, Mori, H, Kirita, Y, Kise, Y, Itoh, Y, Matoba, S, Aburatani, H, Yachie, N, Siksnys, V, Ohmori, T, Hoshino, A, Nureki, O.
登録日2023-04-18
公開日2023-09-27
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献An AsCas12f-based compact genome-editing tool derived by deep mutational scanning and structural analysis.
Cell, 186, 2023
6LKP
DownloadVisualize
BU of 6lkp by Molmil
Crystal structure of Dps1 from the thermophilic non-heterocystous filamentous cyanobacterium Thermoleptolyngbya sp. O-77
分子名称: DNA protection during starvation protein, FE (III) ION, ZINC ION
著者Minato, T, Teramoto, T, Kakuta, Y, Ogo, S, Yoon, K.S.
登録日2019-12-19
公開日2020-03-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Biochemical and structural characterization of a thermostable Dps protein with His-type ferroxidase centers and outer metal-binding sites.
Febs Open Bio, 10, 2020

 

123>

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon