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PDB: 60 件

8F0V
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Lipocalin-like Milk protein-2 - E38A mutant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Milk protein, ZINC ION
著者Subramanian, R, KanagaVijayan, D.
登録日2022-11-04
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Variability in phenylalanine side chain conformations facilitates broad substrate tolerance of fatty acid binding in cockroach milk proteins.
Plos One, 18, 2023
8F0Y
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Lipocalin-like Milk protein-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Milk protein
著者Subramanian, R, KanagaVijayan, D, Shantakumar, R.P.S.
登録日2022-11-04
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Variability in phenylalanine side chain conformations facilitates broad substrate tolerance of fatty acid binding in cockroach milk proteins.
Plos One, 18, 2023
7KCB
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Symmetry in Yeast Alcohol Dehydrogenase 1 -Closed Form with NAD+ and Trifluoroethanol
分子名称: ADH1 isoform 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-05
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7KC2
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Symmetry in Yeast Alcohol Dehydrogenase 1 -Closed Form with NADH
分子名称: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-04
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7LQM
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Glucosamie-6-phosphate Deaminase from Pasturella multocida
分子名称: 1,2-ETHANEDIOL, Glucosamine-6-phosphate deaminase
著者Subramanian, R, Srinivasachari, S.
登録日2021-02-14
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A dimer between monomers and hexamers-Oligomeric variations in glucosamine-6-phosphate deaminase family.
Plos One, 18, 2023
7LQN
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Glucosamine-6-phosphate Deaminase from H. influenzae
分子名称: Glucosamine-6-phosphate deaminase
著者Subramanian, R, Srinivasachari, S.
登録日2021-02-14
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A dimer between monomers and hexamers-Oligomeric variations in glucosamine-6-phosphate deaminase family.
Plos One, 18, 2023
7KCQ
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Symmetry in Yeast Alcohol Dehydrogenase 1 -Open Form of Apoenzyme
分子名称: Alcohol dehydrogenase, ZINC ION
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-07
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7KJY
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Symmetry in Yeast Alcohol Dehydrogenase 1 - Open Form with NADH
分子名称: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-26
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7YX1
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Sandercyanin fluorescent protein - Y142A variant bound to BV
分子名称: BILIVERDINE IX ALPHA, Sandercyanin Fluorescent Protein
著者Subramanian, R, Ghosh, S, Yadav, K.
登録日2022-02-15
公開日2022-07-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Modulation of biliverdin dynamics and spectral properties by Sandercyanin.
Rsc Adv, 12, 2022
5YYB
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Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi with Neu5Gc
分子名称: N-glycolyl-beta-neuraminic acid, Putative ABC transporter periplasmic binding protein
著者Subramanian, R, Setty, T.G.
登録日2017-12-08
公開日2018-10-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.484 Å)
主引用文献Molecular characterization of the interaction of sialic acid with the periplasmic binding protein fromHaemophilus ducreyi.
J. Biol. Chem., 293, 2018
5Z99
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Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi with Neu5Ac
分子名称: N-acetyl-beta-neuraminic acid, Putative ABC transporter periplasmic binding protein
著者Subramanian, R, Setty, T.G.
登録日2018-02-02
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.494 Å)
主引用文献Molecular characterization of the interaction of sialic acid with the periplasmic binding protein fromHaemophilus ducreyi.
J. Biol. Chem., 293, 2018
4L6Y
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Structure of the microtubule associated protein PRC1 (Protein Regulator of Cytokinesis 1)
分子名称: Protein regulator of cytokinesis 1
著者Subramanian, R, Ti, S, Tan, L, Darst, S.A, Kapoor, T.M.
登録日2013-06-13
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.3015 Å)
主引用文献Marking and Measuring Single Microtubules by PRC1 and Kinesin-4.
Cell(Cambridge,Mass.), 154, 2013
4L3I
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Structure of the microtubule associated protein PRC1 (Protein Regulator of Cytokinesis 1)
分子名称: Protein regulator of cytokinesis 1
著者Subramanian, R, Ti, S, Tan, L, Darst, S.A, Kapoor, T.M.
登録日2013-06-06
公開日2013-07-17
最終更新日2013-08-07
実験手法X-RAY DIFFRACTION (3.6005 Å)
主引用文献Marking and Measuring Single Microtubules by PRC1 and Kinesin-4.
Cell(Cambridge,Mass.), 154, 2013
2MOG
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BU of 2mog by Molmil
Solution structure of the terminal Ig-like domain from Leptospira interrogans LigB
分子名称: Bacterial Ig-like domain, group 2
著者Ptak, C.P, Hsieh, C, Lin, Y, Maltsev, A.S, Raman, R, Sharma, Y, Oswald, R.E, Chang, Y.
登録日2014-04-25
公開日2014-08-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Solution Structure of the Terminal Immunoglobulin-like Domain from the Leptospira Host-Interacting Outer Membrane Protein, LigB.
Biochemistry, 53, 2014
6LVE
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Structure of Dimethylformamidase, tetramer, E521A mutant
分子名称: N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
著者Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R.
登録日2020-02-02
公開日2020-06-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
6LVC
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Structure of Dimethylformamidase, dimer
分子名称: FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
著者Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R.
登録日2020-02-02
公開日2020-06-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
6LAY
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Domain-swapped dimer structure of a Single-chain Monellin loop1-delta4-QVVAG mutant
分子名称: Monellin chain B,Monellin chain A
著者Manjula, R, Subramanian, R, Gosavi, S.
登録日2019-11-13
公開日2021-05-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献Domain-swapped dimer structure of a Single-chain Monellin loop1-delta4-QVVAG mutant
To Be Published
7W8J
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Dimethylformamidase, 2x(A2B2)
分子名称: FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
著者Vinothkumar, K.R, Subramanian, R, Arya, C, Ramanathan, G.
登録日2021-12-07
公開日2022-04-06
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Dimethylformamidase with a Unique Iron Center
To Be Published
6LVB
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Structure of Dimethylformamidase, tetramer
分子名称: FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
著者Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R.
登録日2020-02-02
公開日2020-06-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
7BKX
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Diploptera punctata inspired lipocalin-like Milk protein expressed in Saccharomyces cerevisiae
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Banerjee, S, Kanagavijayan, D, Subramanian, R, Santhakumari, P.R, Chavas, L.M.G, Ramaswamy, S.
登録日2021-01-17
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of recombinantly expressed cockroach Lili-Mip protein in glycosylated and deglycosylated forms.
Biochim Biophys Acta Gen Subj, 1866, 2022
6LVD
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Structure of Dimethylformamidase, tetramer, Y440A mutant
分子名称: N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
著者Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R.
登録日2020-02-02
公開日2020-06-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
6ZXS
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Cold grown Pea Photosystem I
分子名称: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Caspy, I, Borovikova-Sheinker, A, Subramanyam, R, Nelson, N.
登録日2020-07-30
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of cold grown pea Photosystem I
To Be Published
8G4V
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Horse liver alcohol dehydrogense His-51-Gln form complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
著者Plapp, B.V, Subramanian, R.
登録日2023-02-10
公開日2023-02-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Histidine-51 facilitates deprotonation of the zinc-bound ligand during catalysis by horse liver alcohol dehydrogenase
To Be Published
6OVH
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Cryo-EM structure of Bimetallic dodecameric cage design 3 (BMC3) from cytochrome cb562
分子名称: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
著者Golub, E, Subramanian, R.H, Yan, X, Alberstein, R.G, Tezcan, F.A.
登録日2019-05-07
公開日2020-01-29
最終更新日2020-02-19
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
1YGH
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HAT DOMAIN OF GCN5 FROM SACCHAROMYCES CEREVISIAE
分子名称: GLYCEROL, PROTEIN (TRANSCRIPTIONAL ACTIVATOR GCN5)
著者Trievel, R.C, Rojas, J.R, Sterner, D.E, Venkataramani, R, Wang, L, Zhou, J, Allis, C.D, Berger, S.L, Marmorstein, R.
登録日1999-05-27
公開日1999-08-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure and mechanism of histone acetylation of the yeast GCN5 transcriptional coactivator.
Proc.Natl.Acad.Sci.USA, 96, 1999

 

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