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PDB: 38 件

4GHL
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Structural Basis for Marburg virus VP35 mediate immune evasion mechanisms
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Ramanan, P, Borek, D.M, Otwinowski, Z, Leung, D.W, Amarasinghe, G.K.
登録日2012-08-07
公開日2012-11-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural basis for Marburg virus VP35-mediated immune evasion mechanisms.
Proc.Natl.Acad.Sci.USA, 109, 2012
3X1V
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BU of 3x1v by Molmil
Crystal structure of nucleosome core particle in the presence of histone variant involved in reprogramming
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
著者Sivaraman, P, Kumarevel, T.S.
登録日2014-11-28
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.921 Å)
主引用文献Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming
Biochem.Biophys.Res.Commun., 464, 2015
3X1U
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Crystal structure of nucleosome core particle in the presence of histone variants involved in reprogramming
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A, ...
著者Sivaraman, P, Kumarevel, T.S.
登録日2014-11-28
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming.
Biochem.Biophys.Res.Commun., 464, 2015
3X1T
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BU of 3x1t by Molmil
Crystal structure of nucleosome core particle consisting of mouse testis specific histone variants H2aa and H2ba
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A, ...
著者Sivaraman, P, Kumarevel, T.S.
登録日2014-11-27
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.808 Å)
主引用文献Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming
Biochem.Biophys.Res.Commun., 464, 2015
3X1S
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BU of 3x1s by Molmil
Crystal structure of the nucleosome core particle
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
著者Sivaraman, P, Kumarevel, T.S.
登録日2014-11-27
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming
Biochem.Biophys.Res.Commun., 464, 2015
4A92
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Full-length HCV NS3-4A protease-helicase in complex with a macrocyclic protease inhibitor.
分子名称: (1'R,2R,2'S,6S,24AS)-17-FLUORO-6-(1-METHYL-2-OXOPIPERIDINE-3-CARBOXAMIDO)-19,19-DIOXIDO-5,21,24-TRIOXO-2'-VINYL-1,2,3,5,6,7,8,9,10,11,12,13,14,20,21,23,24,24A-OCTADECAHYDROSPIRO[BENZO[S]PYRROLO[2,1-G][1,2,5,8,18]THIATETRAAZACYCLOICOSINE-22,1'-CYCLOPRO-2-CARBOXYLATEPAN]-2-YL 4-FLUOROISOINDOLINE, SERINE PROTEASE NS3, ZINC ION
著者Schiering, N, D'Arcy, A, Simic, O, Eder, J, Raman, P, Svergun, D.I, Bodendorf, U.
登録日2011-11-23
公開日2011-12-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献A Macrocyclic Hcv Ns3/4A Protease Inhibitor Interacts with Protease and Helicase Residues in the Complex with its Full- Length Target.
Proc.Natl.Acad.Sci.USA, 108, 2011
5K5S
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BU of 5k5s by Molmil
Crystal structure of the active form of human calcium-sensing receptor extracellular domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Extracellular calcium-sensing receptor, ...
著者Geng, Y, Mosyak, L, Kurinov, I, Zuo, H, Sturchler, E, Cheng, T.C, Subramanyam, P, Brown, A.P, Brennan, S.C, Mun, H.-C, Bush, M, Chen, Y, Nguyen, T, Cao, B, Chang, D, Quick, M, Conigrave, A, Colecraft, H.M, McDonald, P, Fan, Q.R.
登録日2016-05-23
公開日2016-08-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural mechanism of ligand activation in human calcium-sensing receptor.
Elife, 5, 2016
5K5T
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BU of 5k5t by Molmil
Crystal structure of the inactive form of human calcium-sensing receptor extracellular domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Extracellular calcium-sensing receptor, ...
著者Geng, Y, Mosyak, L, Kurinov, I, Zuo, H, Sturchler, E, Cheng, T.C, Subramanyam, P, Brown, A.P, Brennan, S.C, Mun, H.-C, Bush, M, Chen, Y, Nguyen, T, Cao, B, Chang, D, Quick, M, Conigrave, A, Colecraft, H.M, McDonald, P, Fan, Q.R.
登録日2016-05-23
公開日2016-08-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural mechanism of ligand activation in human calcium-sensing receptor.
Elife, 5, 2016
7N40
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BU of 7n40 by Molmil
Crystal structure of LIN9-RbAp48-LIN37, a MuvB subcomplex
分子名称: Histone-binding protein RBBP4, Isoform 2 of Protein lin-9 homolog, Protein lin-37 homolog
著者Asthana, A, Ramanan, P, Tripathi, S.M, Rubin, S.M.
登録日2021-06-02
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The MuvB complex binds and stabilizes nucleosomes downstream of the transcription start site of cell-cycle dependent genes.
Nat Commun, 13, 2022
8GKV
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BU of 8gkv by Molmil
Crystal structure of anti-adaptor IraP that regulates RpoS proteolysis
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Shaw, G.X, Gan, J, Suburaman, P, Battesti, A, Zhou, Y.N, Wickner, S, Gottesman, S, Ji, X.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.351 Å)
主引用文献Structural and functional study of anti-adaptor IraP-mediated regulation of RpoS proteolysis
to be published
5GT0
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BU of 5gt0 by Molmil
Crystal structure of nucleosome complex with human testis-specific histone variants, Th2a
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-A, ...
著者Kumarevel, T, Sivaraman, P.
登録日2016-08-18
公開日2017-02-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b
Biophys. Chem., 221, 2017
5GT3
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BU of 5gt3 by Molmil
Crystal structure of nucleosome particle in the presence of human testis-specific histone variant, hTh2b
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-D, ...
著者Kumarevel, T, Sivaraman, P.
登録日2016-08-18
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b
Biophys. Chem., 221, 2017
5GSU
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BU of 5gsu by Molmil
Crystal structure of nucleosome core particle consisting of human testis-specific histone variants, Th2A and Th2B
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-A, ...
著者Kumarevel, T, Sivaraman, P.
登録日2016-08-17
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b
Biophys. Chem., 221, 2017
4YOS
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BU of 4yos by Molmil
p107 pocket domain complexed with LIN52 peptide
分子名称: 1,2-ETHANEDIOL, Protein lin-52 homolog, Retinoblastoma-like protein 1,Retinoblastoma-like protein 1, ...
著者Guiley, K.Z, Liban, T.J, Felthousen, J.G, Ramanan, P, Tripathi, S, Litovchick, L, Rubin, S.M.
登録日2015-03-12
公開日2015-05-27
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural mechanisms of DREAM complex assembly and regulation.
Genes Dev., 29, 2015
4YOO
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BU of 4yoo by Molmil
p107 pocket domain in complex with LIN52 P29A peptide
分子名称: LIN52 peptide, Retinoblastoma-like protein 1,Retinoblastoma-like protein 1, SULFATE ION
著者Guiley, K.Z, Liban, T.J, Felthousen, J.G, Ramanan, P, Tripathi, S, Litovchick, L, Rubin, S.M.
登録日2015-03-12
公開日2015-05-13
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural mechanisms of DREAM complex assembly and regulation.
Genes Dev., 29, 2015
5KSU
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BU of 5ksu by Molmil
Crystal structure of HLA-DQ2.5-CLIP1 at 2.73 resolution
分子名称: HLA class II histocompatibility antigen gamma chain, HLA class II histocompatibility antigen, DQ alpha 1 chain, ...
著者Nguyen, T.-B, Jayaraman, P, Bergseng, E, Madhusudhan, M.S, Kim, C.-Y, Sollid, L.M.
登録日2016-07-10
公開日2017-04-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Unraveling the structural basis for the unusually rich association of human leukocyte antigen DQ2.5 with class-II-associated invariant chain peptides.
J. Biol. Chem., 292, 2017
7VO6
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BU of 7vo6 by Molmil
High resolution crystal structure of human PSMD10 (Gankyrin)
分子名称: 26S proteasome non-ATPase regulatory subunit 10, MALONIC ACID
著者Mukund Sudharsan, M.G, Venkatraman, P.
登録日2021-10-12
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献A crystal form of PSMD10 Gankyrin with channels accessible to small molecules.
Curr.Sci., 122, 2022
7VXW
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BU of 7vxw by Molmil
Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 1 hour incubation
分子名称: 26S proteasome non-ATPase regulatory subunit 10, UREA
著者Mukund Sudharsan, M.G, Dalvi, S, Venkatraman, P.
登録日2021-11-13
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Snapshots of urea-induced early structural changes and unfolding of an ankyrin repeat protein at atomic resolution.
Protein Sci., 31, 2022
7VY7
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BU of 7vy7 by Molmil
Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 3 hours incubation
分子名称: 26S proteasome non-ATPase regulatory subunit 10, UREA
著者Mukund Sudharsan, M.G, Dalvi, S, Venkatraman, P.
登録日2021-11-13
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Snapshots of urea-induced early structural changes and unfolding of an ankyrin repeat protein at atomic resolution.
Protein Sci., 31, 2022
7VXV
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BU of 7vxv by Molmil
Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 0 hours incubation / Native
分子名称: 26S proteasome non-ATPase regulatory subunit 10
著者Mukund Sudharsan, M.G, Dalvi, S, Venkatraman, P.
登録日2021-11-13
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Snapshots of urea-induced early structural changes and unfolding of an ankyrin repeat protein at atomic resolution.
Protein Sci., 31, 2022
7VY4
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BU of 7vy4 by Molmil
Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 2 hours incubation
分子名称: 26S proteasome non-ATPase regulatory subunit 10, UREA
著者Mukund Sudharsan, M.G, Dalvi, S, Venkatraman, P.
登録日2021-11-13
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Snapshots of urea-induced early structural changes and unfolding of an ankyrin repeat protein at atomic resolution.
Protein Sci., 31, 2022
5KSV
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BU of 5ksv by Molmil
Crystal structure of HLA-DQ2.5-CLIP2
分子名称: HLA class II histocompatibility antigen gamma chain, MHC class II HLA-DQ-alpha chain, MHC class II HLA-DQ-beta-1
著者Nguyen, T.B, Jayaraman, P, Bergseng, E, Madhusudhan, M.S, Kim, C.-Y, Sollid, L.M.
登録日2016-07-10
公開日2017-04-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.195 Å)
主引用文献Unraveling the structural basis for the unusually rich association of human leukocyte antigen DQ2.5 with class-II-associated invariant chain peptides.
J. Biol. Chem., 292, 2017
4YOZ
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BU of 4yoz by Molmil
p107 pocket domain in complex with HPV E7 peptide
分子名称: HPV E7 peptide, Retinoblastoma-like protein 1,Retinoblastoma-like protein 1, SULFATE ION
著者Liban, T.J, Guiley, K.Z, Felthousen, J.G, Ramanan, P, Litovchick, L, Rubin, S.M.
登録日2015-03-12
公開日2015-06-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.245 Å)
主引用文献Structural mechanisms of DREAM complex assembly and regulation.
Genes Dev., 29, 2015
4IBG
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BU of 4ibg by Molmil
Ebola virus VP35 bound to small molecule
分子名称: GLYCEROL, PHOSPHATE ION, Polymerase cofactor VP35, ...
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBB
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BU of 4ibb by Molmil
Ebola virus VP35 bound to small molecule
分子名称: Polymerase cofactor VP35, {4-[(5R)-3-hydroxy-2-oxo-4-(thiophen-2-ylcarbonyl)-5-(2,4,5-trimethylphenyl)-2,5-dihydro-1H-pyrrol-1-yl]phenyl}acetic acid
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-12-08
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014

 

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