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PDB: 1201 件
2DEM
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BU of 2dem by Molmil
Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA
分子名称: 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*AP*GP*CP*AP*AP*CP*A)-3', DIHYDROGENPHOSPHATE ION, ...
著者Kosaka, H, Nakagawa, N, Masui, R, Hoseki, J, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-02-13
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
1GC3
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BU of 1gc3 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2 COMPLEXED WITH TRYPTOPHAN
分子名称: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, TRYPTOPHAN
著者Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
登録日2000-07-18
公開日2001-09-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
3SVL
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BU of 3svl by Molmil
Structural basis of the improvement of ChrR - a multi-purpose enzyme
分子名称: CALCIUM ION, FLAVIN MONONUCLEOTIDE, protein yieF
著者Poulain, S, Eswaramoorthy, S, Hienerwadel, R, Bremond, N, Sylvester, M.D, Zhang, Y.B, Van Der Lelie, D, Berthomieu, C, Matin, A.C.
登録日2011-07-12
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of ChrR-A Quinone Reductase with the Capacity to Reduce Chromate.
Plos One, 7, 2012
1GC4
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BU of 1gc4 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2 COMPLEXED WITH ASPARTATE
分子名称: ASPARTATE AMINOTRANSFERASE, ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
登録日2000-07-19
公開日2001-09-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
1CQ6
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BU of 1cq6 by Molmil
ASPARTATE AMINOTRANSFERASE COMPLEX WITH C4-PYRIDOXAL-5P-PHOSPHATE
分子名称: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO- BUTYRIC ACID, ASPARTATE AMINOTRANSFERASE
著者Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
登録日1999-08-06
公開日2000-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
2EC2
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BU of 2ec2 by Molmil
Crystal structure of transposase from Sulfolobus tokodaii
分子名称: 136aa long hypothetical transposase, SULFATE ION
著者Kawai, K, Suzuki, A, Kuramitsu, S, Masui, R, Yamane, T.
登録日2007-02-09
公開日2007-02-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of transposase from Sulfolobus tokodaii
To be Published
2E82
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BU of 2e82 by Molmil
Crystal structure of human D-amino acid oxidase complexed with imino-DOPA
分子名称: (2E)-3-(3,4-DIHYDROXYPHENYL)-2-IMINOPROPANOIC ACID, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Kawazoe, T, Tsuge, H, Imagawa, T, Kuramitsu, S, Fukui, K.
登録日2007-01-16
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of d-DOPA oxidation by d-amino acid oxidase: Alternative pathway for dopamine biosynthesis.
Biochem.Biophys.Res.Commun., 355, 2007
1XSM
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BU of 1xsm by Molmil
PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE FROM MOUSE
分子名称: FE (III) ION, RIBONUCLEOTIDE REDUCTASE R2
著者Kauppi, B, Nielsen, B.N, Ramaswamy, S, Kjoller-Larsen, I, Thelander, M, Thelander, L, Eklund, H.
登録日1996-07-03
公開日1997-01-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2.
J.Mol.Biol., 262, 1996
1GCK
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BU of 1gck by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE DOUBLE MUTANT 1 COMPLEXED WITH ASPARTATE
分子名称: ASPARTATE AMINOTRANSFERASE, ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Hirotsu, K, Kuramitsu, S.
登録日2000-08-04
公開日2001-11-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme.
J.Biochem., 130, 2001
1GD7
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BU of 1gd7 by Molmil
CRYSTAL STRUCTURE OF A BIFUNCTIONAL PROTEIN (CSAA) WITH EXPORT-RELATED CHAPERONE AND TRNA-BINDING ACTIVITIES.
分子名称: CSAA PROTEIN
著者Shibata, T, Inoue, Y, Vassylyev, D.G, Kawaguchi, S, Yokoyama, S, Muller, J, Linde, D, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-09-22
公開日2001-09-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the ttCsaA protein: an export-related chaperone from Thermus thermophilus.
EMBO J., 20, 2001
2YQY
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BU of 2yqy by Molmil
Crystal structure of TT2238, a four-helix bundle protein
分子名称: Hypothetical protein TTHA0303
著者Nagata, K, Ohtsuka, J, Iino, H, Ebihara, A, Yokoyama, S, Kuramitsu, S, Tanokura, M.
登録日2007-03-31
公開日2008-03-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of TTHA0303 (TT2238), a four-helix bundle protein with an exposed histidine triad from Thermus thermophilus HB8 at 2.0 A
Proteins, 70, 2008
1ZB1
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BU of 1zb1 by Molmil
Structure basis for endosomal targeting by the Bro1 domain
分子名称: BRO1 protein
著者Kim, J, Sitaraman, S, Hierro, A, Beach, B.M, Odorizzi, G, Hurley, J.H.
登録日2005-04-07
公開日2005-06-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for endosomal targeting by the Bro1 domain.
Dev.Cell, 8, 2005
1YX9
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BU of 1yx9 by Molmil
Effect of Dimethyl Sulphoxide on the crystal structure of Porcine Pepsin
分子名称: DIMETHYL SULFOXIDE, pepsinogen A
著者Kesavulu, M.M, Ramasubramanian, S, Suguna, K.
登録日2005-02-20
公開日2005-05-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Effect of dimethyl sulphoxide on the crystal structure of porcine pepsin.
Biochem.Biophys.Res.Commun., 331, 2005
1T3A
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BU of 1t3a by Molmil
Crystal structure of Clostridium botulinum neurotoxin type E catalytic domain
分子名称: CHLORIDE ION, ZINC ION, neurotoxin type E
著者Agarwal, R, Eswaramoorthy, S, Kumaran, D, Binz, T, Swaminathan, S.
登録日2004-04-26
公開日2004-06-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural analysis of botulinum neurotoxin type E catalytic domain and its mutant Glu212-->Gln reveals the pivotal role of the Glu212 carboxylate in the catalytic pathway
Biochemistry, 43, 2004
2D64
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BU of 2d64 by Molmil
Aspartate Aminotransferase Mutant MABC With Isovaleric Acid
分子名称: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
1SXK
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BU of 1sxk by Molmil
Crystal Structure of a complex formed between phospholipase A2 and a non-specific anti-inflammatory amino salicylic acid at 1.2 A resolution
分子名称: 2-HYDROXY-4-AMINOBENZOIC ACID, Phospholipase A2 VRV-PL-VIIIa, SULFATE ION
著者Singh, N, Bilgrami, S, Kaur, P, Sharma, S, Singh, T.P.
登録日2004-03-31
公開日2004-04-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal Structure of a complex formed between phospholipase A2 and a non-specific anti-inflammatory amino salicylic acid at 1.2 A resolution
To be Published
1T3C
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BU of 1t3c by Molmil
Clostridium botulinum type E catalytic domain E212Q mutant
分子名称: CHLORIDE ION, ZINC ION, neurotoxin type E
著者Agarwal, R, Eswaramoorthy, S, Kumaran, D, Binz, T, Swaminathan, S.
登録日2004-04-26
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of botulinum neurotoxin type E catalytic domain and its mutant Glu212-->Gln reveals the pivotal role of the Glu212 carboxylate in the catalytic pathway
Biochemistry, 43, 2004
2D63
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BU of 2d63 by Molmil
Aspartate Aminotransferase Mutant MA With Isovaleric Acid
分子名称: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D61
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BU of 2d61 by Molmil
Aspartate Aminotransferase Mutant MA With Maleic Acid
分子名称: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-08
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2ZO4
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BU of 2zo4 by Molmil
Crystal structure of metallo-beta-lactamase family protein TTHA1429 from Thermus thermophilus HB8
分子名称: Metallo-beta-lactamase family protein, ZINC ION
著者Yamamura, A, Nagata, K, Agari, Y, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, Tanokura, M.
登録日2008-05-05
公開日2009-03-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of TTHA1429, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8.
Proteins, 73, 2008
2GVF
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BU of 2gvf by Molmil
HCV NS3-4A protease domain complexed with a macrocyclic ketoamide inhibitor, SCH419021
分子名称: (6R,8S,11S)-11-CYCLOHEXYL-N-(1-{[(2-{[(1S)-2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO}-2-OXOETHYL)AMINO](OXO)ACETYL}BUTYL)-10,13-DIOXO-2,5-DIOXA-9,12-DIAZATRICYCLO[14.3.1.1~6,9~]HENICOSA-1(20),16,18-TRIENE-8-CARBOXAMIDE, Polyprotein, ZINC ION, ...
著者Arasappan, A, Njoroge, F.G, Chen, K.X, Venkatraman, S, Parekh, T.N, Gu, H, Pichardo, J, Butkiewicz, N, Prongay, A, Madison, V, Girijavallabhan, V.
登録日2006-05-02
公開日2007-01-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献P2-P4 macrocyclic inhibitors of hepatitis C virus NS3-4A serine protease.
Bioorg.Med.Chem.Lett., 16, 2006
2Q3N
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BU of 2q3n by Molmil
Agglutinin from Abrus Precatorius (APA-I)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Agglutinin-1 A chain, Agglutinin-1 B chain
著者Bagaria, A, Surendranath, K, Ramagopal, U.A, Ramakumar, S, Karande, A.A.
登録日2007-05-30
公開日2007-06-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure-Function Analysis and Insights into the Reduced Toxicity of Abrus precatorius Agglutinin I in Relation to Abrin.
J.Biol.Chem., 281, 2006
1CQ7
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BU of 1cq7 by Molmil
ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C5-PYRIDOXAL-5P-PHOSPHATE
分子名称: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-PENTANOIC ACID, ASPARTATE AMINOTRANSFERASE
著者Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
登録日1999-08-06
公開日2000-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
2ZWR
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BU of 2zwr by Molmil
Crystal structure of TTHA1623 from thermus thermophilus HB8
分子名称: Metallo-beta-lactamase superfamily protein, ZINC ION
著者Yamamura, A, Okada, A, Kameda, Y, Ohtsuka, J, Nakagawa, N, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
登録日2008-12-17
公開日2009-10-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8
Acta Crystallogr.,Sect.F, 65, 2009
2D5Y
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BU of 2d5y by Molmil
Aspartate Aminotransferase Mutant MC With Isovaleric Acid
分子名称: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-08
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published

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