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PDB: 145 results

8WCR
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BU of 8wcr by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-09-13
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
8WCQ
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BU of 8wcq by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in intermediate state
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-09-13
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
6QBO
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BU of 6qbo by Molmil
structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S203A
Descriptor: Cell wall assembly regulator SMI1
Authors:Ramos, N, Batista, M, Francois, J.M, Mourey, L, Maveyraud, L, Zerbib, D.
Deposit date:2018-12-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S203A
To Be Published
6QBP
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BU of 6qbp by Molmil
structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S203D
Descriptor: Cell wall assembly regulator SMI1
Authors:Ramos, N, Batista, M, Francois, J.M, Mourey, L, Maveyraud, L, Zerbib, D.
Deposit date:2018-12-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:structure of the core domaine of Knr4, an intrinsically disordered protein from Saccharomyces cerevisiae - mutant S203D
To Be Published
8I47
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BU of 8i47 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 5.5
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-01-18
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
8I42
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BU of 8i42 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 7.5
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-01-18
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
8I41
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BU of 8i41 by Molmil
Cryo-EM structure of nanodisc (asolectin) reconstituted GLIC at pH 7.5
Descriptor: DIUNDECYL PHOSPHATIDYL CHOLINE, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-01-18
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
8I48
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BU of 8i48 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in closed state
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-01-18
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
8JJ3
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BU of 8jj3 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 2.5
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-05-29
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.6476 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
4WP9
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BU of 4wp9 by Molmil
Crystal structure of Adenylyl cyclase MA1120 from Mycobacterium Avium bound to 2'5'-DD-3'-ATP, Calcium and Magnesium ion
Descriptor: 2',5'-dideoxyadenosine 3'-(tetrahydrogen triphosphate), CALCIUM ION, MAGNESIUM ION, ...
Authors:Bharambe, N.G, Barathy, D.V, Suguna, K.
Deposit date:2014-10-17
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.382 Å)
Cite:Autoinhibitory mechanism and activity-related structural changes in a mycobacterial adenylyl cyclase
J.Struct.Biol., 190, 2015
4WPA
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BU of 4wpa by Molmil
Crystal structure of Adenylyl cyclase Ma1120 from Mycobacterium Avium bound to Pyrophosphate and Calcium
Descriptor: CALCIUM ION, Ma1120, PYROPHOSPHATE
Authors:Bharambe, N.G, Barathy, D.V, Suguna, K.
Deposit date:2014-10-17
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Autoinhibitory mechanism and activity-related structural changes in a mycobacterial adenylyl cyclase
J.Struct.Biol., 190, 2015
5D0G
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BU of 5d0g by Molmil
Crystal structure of triple mutant (KDA to EGY) of adenylyl cyclase Ma1120 from Mycobacterium avium in complex with GTP and calcium ion
Descriptor: CALCIUM ION, Cyclase, GUANOSINE-5'-TRIPHOSPHATE
Authors:Bharambe, N.G, Suguna, K.
Deposit date:2015-08-03
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate specificity determinants of class III nucleotidyl cyclases
Febs J., 283, 2016
5D15
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BU of 5d15 by Molmil
Crystal structure of an adenylyl cyclase Ma1120 from Mycobacterium avium in complex with ATP and calcium ion
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Bharambe, N.G, Barathy, D.V, Suguna, K.
Deposit date:2015-08-03
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Substrate specificity determinants of class III nucleotidyl cyclases
Febs J., 283, 2016
5D0E
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BU of 5d0e by Molmil
Crystal Structure of an adenylyl cyclase Ma1120-Cat in complex with GTP and calcium from Mycobacterium avium
Descriptor: CALCIUM ION, CHLORIDE ION, Cyclase, ...
Authors:Bharambe, N.G, Barathy, D.V, Suguna, K.
Deposit date:2015-08-03
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Substrate specificity determinants of class III nucleotidyl cyclases
Febs J., 283, 2016
5D0H
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BU of 5d0h by Molmil
Crystal Structure of triple mutant (KDA to EGY) of an adenylyl cyclase Ma1120 from Mycobacterium avium in complex with ATP and calcium ion
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Cyclase
Authors:Bharambe, N.G, Suguna, K.
Deposit date:2015-08-03
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate specificity determinants of class III nucleotidyl cyclases
Febs J., 283, 2016
1Q4N
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BU of 1q4n by Molmil
Structural studies of Phe256Trp of human salivary alpha-amylase: implications for the role of a conserved water molecule and its associated chain in enzyme activity
Descriptor: Alpha-amylase, salivary, CALCIUM ION, ...
Authors:Ramasubbu, N.
Deposit date:2003-08-04
Release date:2004-03-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural studies of a Phe256Trp mutant of human salivary alpha-amylase: implications for the role of a conserved water molecule in enzyme activity
Arch.Biochem.Biophys., 421, 2004
1SMD
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BU of 1smd by Molmil
HUMAN SALIVARY AMYLASE
Descriptor: AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Ramasubbu, N.
Deposit date:1996-01-24
Release date:1996-07-11
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of human salivary alpha-amylase at 1.6 A resolution: implications for its role in the oral cavity.
Acta Crystallogr.,Sect.D, 52, 1996
1YHT
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BU of 1yht by Molmil
Crystal structure analysis of Dispersin B
Descriptor: ACETIC ACID, DspB, GLYCEROL
Authors:Ramasubbu, N, Thomas, L.M, Ragunath, C, Kaplan, J.B.
Deposit date:2005-01-10
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of Dispersin B, a Biofilm-releasing Glycoside Hydrolase from the Periodontopathogen Actinobacillus actinomycetemcomitans.
J.Mol.Biol., 349, 2005
1MFU
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BU of 1mfu by Molmil
Probing the role of a mobile loop in human salivary amylase: Structural studies on the loop-deleted mutant
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, ...
Authors:Ramasubbu, N, Ragunath, C, Mishra, P.J.
Deposit date:2002-08-13
Release date:2002-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the role of a mobile loop in substrate binding and enzyme activity of human salivary amylase.
J.Mol.Biol., 325, 2003
3BLP
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BU of 3blp by Molmil
Role of aromatic residues in human salivary alpha-amylase
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, Alpha-amylase 1, ...
Authors:Ramasubbu, N.
Deposit date:2007-12-11
Release date:2008-11-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-function relationships in human salivary alpha-amylase: role of aromatic residues in a secondary binding site
Biologia, 63, 2008
1NM9
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BU of 1nm9 by Molmil
Crystal structure of recombinant human salivary amylase mutant W58A
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, Alpha-amylase, ...
Authors:Ramasubbu, N, Ragunath, C, Mishra, P.J, Thomas, L.M.
Deposit date:2003-01-09
Release date:2004-01-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human salivary alpha-amylase Trp58 situated at subsite -2 is critical for enzyme activity.
Eur.J.Biochem., 271, 2004
3BLK
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BU of 3blk by Molmil
Role of aromatic residues in starch binding
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, Alpha-amylase 1, ...
Authors:Ramasubbu, N.
Deposit date:2007-12-11
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-function relationships in human salivary alpha-amylase: role of aromatic residues in a secondary binding site
Biologia, 63, 2008
1MFV
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BU of 1mfv by Molmil
Probing the role of a mobile loop in human slaivary amylase: Structural studies on the loop-deleted enzyme
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, ...
Authors:Ramasubbu, N, Ragunath, C, Mishra, P.J.
Deposit date:2002-08-13
Release date:2002-11-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the role of a mobile loop in substrate binding and enzyme activity of human salivary amylase.
J.Mol.Biol., 325, 2003
1C8Q
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BU of 1c8q by Molmil
STRUCTURE SOLUTION AND REFINEMENT OF THE RECOMBINANT HUMAN SALIVARY AMYLASE
Descriptor: ALPHA-AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Ramasubbu, N, Sekar, K, Velmurugan, D.
Deposit date:2000-06-08
Release date:2001-06-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure solution and refinment of recombinant human salivary amylase
To be Published
1AQP
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BU of 1aqp by Molmil
RIBONUCLEASE A COPPER COMPLEX
Descriptor: COPPER (II) ION, RIBONUCLEASE A
Authors:Ramasubbu, N.
Deposit date:1997-07-31
Release date:1998-05-27
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the copper and nickel complexes of RNase A: metal-induced interprotein interactions and identification of a novel copper binding motif.
Proc.Natl.Acad.Sci.USA, 94, 1997

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PDB entries from 2024-07-31

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