4EFM
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![BU of 4efm by Molmil](/molmil-images/mine/4efm) | Crystal structure of H-Ras G12V in complex with GppNHp (state 1) | Descriptor: | GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | Authors: | Muraoka, S, Shima, F, Araki, M, Inoue, T, Yoshimoto, A, Ijiri, Y, Seki, N, Tamura, A, Kumasaka, T, Yamamoto, M, Kataoka, T. | Deposit date: | 2012-03-30 | Release date: | 2012-05-16 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structures of the state 1 conformations of the GTP-bound H-Ras protein and its oncogenic G12V and Q61L mutants Febs Lett., 586, 2012
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2RPQ
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![BU of 2rpq by Molmil](/molmil-images/mine/2rpq) | Solution Structure of a SUMO-interacting motif of MBD1-containing chromatin-associated factor 1 bound to SUMO-3 | Descriptor: | Activating transcription factor 7-interacting protein 1, Small ubiquitin-related modifier 2 | Authors: | Sekiyama, N, Ikegami, T, Yamane, T, Ikeguchi, M, Uchimura, Y, Baba, D, Ariyoshi, M, Tochio, H, Saitoh, H, Shirakawa, M. | Deposit date: | 2008-07-07 | Release date: | 2008-10-07 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Structure of the small ubiquitin-like modifier (SUMO)-interacting motif of MBD1-containing chromatin-associated factor 1 bound to SUMO-3 J.Biol.Chem., 283, 2008
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4M29
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![BU of 4m29 by Molmil](/molmil-images/mine/4m29) | Structure of a GH39 Beta-xylosidase from Caulobacter crescentus | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-xylosidase | Authors: | Polo, C.C, Santos, C.R, Correa, J.M, Simao, R.C.G, Seixas, F.A.V, Murakami, M.T. | Deposit date: | 2013-08-05 | Release date: | 2013-08-14 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structure of a GH39 Beta-xylosidase from Caulobacter crescentus Thesis
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6YN0
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![BU of 6yn0 by Molmil](/molmil-images/mine/6yn0) | Structure of E. coli PBP1b with a FtsN peptide activating transglycosylase activity | Descriptor: | Cell division protein FtsN, MOENOMYCIN, Penicillin-binding protein 1B | Authors: | Kerff, F, Terrak, M, Boes, A, Herman, H, Charlier, P. | Deposit date: | 2020-04-10 | Release date: | 2020-11-04 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | The bacterial cell division protein fragment E FtsN binds to and activates the major peptidoglycan synthase PBP1b. J.Biol.Chem., 295, 2020
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5JVO
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![BU of 5jvo by Molmil](/molmil-images/mine/5jvo) | Crystal structure of the Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis | Descriptor: | Arginine repressor, SULFATE ION, TYROSINE | Authors: | Mariutti, R.B, Ullah, A, Murakami, M.T, Arni, R.K. | Deposit date: | 2016-05-11 | Release date: | 2016-08-31 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Tyrosine binding and promiscuity in the arginine repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis. Biochem.Biophys.Res.Commun., 475, 2016
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1IG4
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![BU of 1ig4 by Molmil](/molmil-images/mine/1ig4) | Solution Structure of the Methyl-CpG-Binding Domain of Human MBD1 in Complex with Methylated DNA | Descriptor: | 5'-D(*GP*TP*AP*TP*CP*(5CM)P*GP*GP*AP*TP*AP*C)-3', Methyl-CpG Binding Protein | Authors: | Ohki, I, Shimotake, N, Fujita, N, Jee, J.-G, Ikegami, T, Nakao, M, Shirakawa, M. | Deposit date: | 2001-04-17 | Release date: | 2001-05-30 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of the methyl-CpG binding domain of human MBD1 in complex with methylated DNA. Cell(Cambridge,Mass.), 105, 2001
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1IRG
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![BU of 1irg by Molmil](/molmil-images/mine/1irg) | INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES | Descriptor: | INTERFERON REGULATORY FACTOR-2 | Authors: | Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y. | Deposit date: | 1997-11-25 | Release date: | 1998-03-18 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family. Structure, 6, 1998
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4P4O
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![BU of 4p4o by Molmil](/molmil-images/mine/4p4o) | Crystal structure of Leishmania infantum polymerase beta: Ternary gap complex | Descriptor: | 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*T)-3'), DNA (5'-D(P*CP*GP*GP*CP*AP*AP*TP*AP*CP*TP*G)-3'), ... | Authors: | Mejia, E, Burak, M, Alonso, A, Larraga, V, Kunkel, T, Bebenek, K, Garcia-Diaz, M. | Deposit date: | 2014-03-12 | Release date: | 2014-08-06 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.3001 Å) | Cite: | Structures of the Leishmania infantum polymerase beta. DNA Repair (Amst.), 18, 2014
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3PZ9
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![BU of 3pz9 by Molmil](/molmil-images/mine/3pz9) | Native structure of endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 | Descriptor: | Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5 | Authors: | Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T. | Deposit date: | 2010-12-14 | Release date: | 2011-12-28 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.42 Å) | Cite: | Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published
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3PZO
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![BU of 3pzo by Molmil](/molmil-images/mine/3pzo) | Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 in complex with three maltose molecules | Descriptor: | GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | Authors: | Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T. | Deposit date: | 2010-12-14 | Release date: | 2011-12-28 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published
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3PZN
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![BU of 3pzn by Molmil](/molmil-images/mine/3pzn) | Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with citrate and glycerol | Descriptor: | CITRIC ACID, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5 | Authors: | Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T. | Deposit date: | 2010-12-14 | Release date: | 2011-12-28 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published
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5HNN
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![BU of 5hnn by Molmil](/molmil-images/mine/5hnn) | |
3VXV
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![BU of 3vxv by Molmil](/molmil-images/mine/3vxv) | Crystal structure of methyl CpG Binding Domain of MBD4 in complex with the 5mCG/TG sequence | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(*GP*TP*CP*AP*CP*TP*AP*CP*(5CM)P*GP*GP*AP*CP*A)-3'), ... | Authors: | Otani, J, Arita, K, Kato, T, Kinoshita, M, Ariyoshi, M, Shirakawa, M. | Deposit date: | 2012-09-21 | Release date: | 2013-01-16 | Last modified: | 2013-08-14 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural basis of the versatile DNA recognition ability of the methyl-CpG binding domain of methyl-CpG binding domain protein 4 J.Biol.Chem., 288, 2013
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4KB3
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![BU of 4kb3 by Molmil](/molmil-images/mine/4kb3) | |
3PZM
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![BU of 3pzm by Molmil](/molmil-images/mine/3pzm) | Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with three glycerol molecules | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5 | Authors: | Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T. | Deposit date: | 2010-12-14 | Release date: | 2011-12-28 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published
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4P4M
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![BU of 4p4m by Molmil](/molmil-images/mine/4p4m) | Crystal structure of Leishmania infantum polymerase beta: Ternary P/T complex | Descriptor: | 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*A)-3'), DNA (5'-D(P*AP*TP*AP*CP*TP*G)-3'), ... | Authors: | Mejia, E, Burak, M, Alonso, A, Larraga, V, Kunkel, T.A, Bebenek, K, Garcia-Diaz, M. | Deposit date: | 2014-03-12 | Release date: | 2014-08-06 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.9185 Å) | Cite: | Structures of the Leishmania infantum polymerase beta. DNA Repair (Amst.), 18, 2014
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4L8T
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![BU of 4l8t by Molmil](/molmil-images/mine/4l8t) | Structure of the Cargo Binding Domain from Human Myosin Vc | Descriptor: | Unconventional myosin-Vc | Authors: | Nascimento, A.F.Z, Tonoli, C.C.C, Trindade, D.M, Assis, L.H.P, Mahajan, P, Berridge, G, Krojer, T, Burgess-Brown, N, von Delft, F, Murakami, M.T. | Deposit date: | 2013-06-17 | Release date: | 2013-10-09 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.95 Å) | Cite: | Structural Insights into Functional Overlapping and Differentiation among Myosin V Motors. J.Biol.Chem., 288, 2013
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3PZQ
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![BU of 3pzq by Molmil](/molmil-images/mine/3pzq) | Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with maltose and glycerol | Descriptor: | Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | Authors: | Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T. | Deposit date: | 2010-12-14 | Release date: | 2011-12-28 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.92 Å) | Cite: | Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published
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1YJ5
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![BU of 1yj5 by Molmil](/molmil-images/mine/1yj5) | Molecular architecture of mammalian polynucleotide kinase, a DNA repair enzyme | Descriptor: | 5' polynucleotide kinase-3' phosphatase FHA domain, 5' polynucleotide kinase-3' phosphatase catalytic domain, SULFATE ION | Authors: | Bernstein, N.K, Williams, R.S, Rakovszky, M.L, Cui, D, Green, R, Karimi-Busheri, F, Mani, R.S, Galicia, S, Koch, C.A, Cass, C.E, Durocher, D, Weinfeld, M, Glover, J.N.M. | Deposit date: | 2005-01-13 | Release date: | 2005-03-15 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | The molecular architecture of the mammalian DNA repair enzyme, polynucleotide kinase. Mol.Cell, 17, 2005
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3VXX
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![BU of 3vxx by Molmil](/molmil-images/mine/3vxx) | Crystal structure of methyl CpG binding domain of MBD4 in complex with the 5mCG/5mCG sequence | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(*GP*TP*CP*(5CM)P*GP*GP*TP*AP*GP*TP*GP*AP*CP*T)-3'), ... | Authors: | Otani, J, Arita, K, Kato, T, Kinoshita, M, Ariyoshi, M, Shirakawa, M. | Deposit date: | 2012-09-21 | Release date: | 2013-01-16 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.204 Å) | Cite: | Structural basis of the versatile DNA recognition ability of the methyl-CpG binding domain of methyl-CpG binding domain protein 4 J.Biol.Chem., 288, 2013
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4KPC
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![BU of 4kpc by Molmil](/molmil-images/mine/4kpc) | Crystal structure of the nucleoside diphosphate kinase b from Leishmania braziliensis | Descriptor: | Nucleoside diphosphate kinase b, PHOSPHATE ION | Authors: | Vieira, P.S, Giuseppe, P.O, Santos, C.R, Cunha, E.M.F, de Oliveira, A.H.C, Murakami, M.T. | Deposit date: | 2013-05-13 | Release date: | 2014-07-09 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structure and biophysical characterization of the nucleoside diphosphate kinase from Leishmania braziliensis. Bmc Struct.Biol., 15, 2015
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1IRF
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![BU of 1irf by Molmil](/molmil-images/mine/1irf) | INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE | Descriptor: | INTERFERON REGULATORY FACTOR-2 | Authors: | Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y. | Deposit date: | 1997-11-24 | Release date: | 1998-01-28 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family. Structure, 6, 1998
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3PZI
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![BU of 3pzi by Molmil](/molmil-images/mine/3pzi) | Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 in complex with beta-D-glucose | Descriptor: | Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, beta-D-glucopyranose | Authors: | Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T. | Deposit date: | 2010-12-14 | Release date: | 2011-12-28 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published
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5U4Z
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![BU of 5u4z by Molmil](/molmil-images/mine/5u4z) | Crystal structure of citrus MAF1 in space group P 31 2 1 | Descriptor: | Repressor of RNA polymerase III transcription, SULFATE ION | Authors: | Soprano, A.S, Giuseppe, P.O, Nascimento, A.F.Z, Benedetti, C.E, Murakami, M.T. | Deposit date: | 2016-12-06 | Release date: | 2017-07-19 | Last modified: | 2020-01-01 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Crystal structure of citrus MAF1 in space group P 31 2 1 To Be Published
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1OCP
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![BU of 1ocp by Molmil](/molmil-images/mine/1ocp) | SOLUTION STRUCTURE OF OCT3 POU-HOMEODOMAIN | Descriptor: | OCT-3 | Authors: | Morita, E.H, Hayashi, F, Shirakawa, M, Kyogoku, Y. | Deposit date: | 1995-02-21 | Release date: | 1995-09-15 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structure of the Oct-3 POU-Homeodomain in Solution, as Determined by Triple Resonance Heteronuclear Multidimensional NMR Spectroscopy Protein Sci., 4, 1995
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