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PDB: 110 件

3H98
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Crystal structure of HCV NS5b 1b with (1,1-dioxo-2H-[1,2,4]benzothiadiazin-3-yl) azolo[1,5-a]pyrimidine derivative
分子名称: GLYCEROL, N-{3-[5-hydroxy-8-(3-methylbutyl)-7-oxo-7,8-dihydroimidazo[1,2-a]pyrimidin-6-yl]-1,1-dioxido-4H-1,2,4-benzothiadiazin-7-yl}methanesulfonamide, RNA-directed RNA polymerase
著者Wang, G, Lei, H, Wang, X, Das, D, Mackinnon, C, Montalbetti, C.A.G, Mears, R, Gai, X, Bailey, S, Ruhrmund, D, Hooi, L, Misialek, S, Rajagopalan, R, Cheng, R.K.Y, Barker, J.L, Felicetti, B, Stoycheva, A, Buckman, B, Kossen, K, Seiwert, S, Beigelmana, L.
登録日2009-04-30
公開日2009-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献HCV NS5B polymerase inhibitors 2: Synthesis and in vitro activity of (1,1-dioxo-2H-[1,2,4]benzothiadiazin-3-yl) azolo[1,5-a]pyridine and azolo[1,5-a]pyrimidine derivatives.
Bioorg.Med.Chem.Lett., 19, 2009
1SGU
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Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease
分子名称: N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, POL polyprotein
著者Clemente, J.C, Moose, R.E, Hemrajani, R, Govindasamy, L, Reutzel, R, Mckenna, R, Abandje-McKenna, M, Goodenow, M.M, Dunn, B.M.
登録日2004-02-24
公開日2004-10-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease.
Biochemistry, 43, 2004
1SH9
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Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease
分子名称: POL polyprotein, RITONAVIR
著者Clemente, J.C, Moose, R.E, Hemrajani, R, Govindasamy, L, Reutzel, R, McKenna, R, Abanje-McKenna, M, Goodenow, M.M, Dunn, B.M.
登録日2004-02-25
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease.
Biochemistry, 43, 2004
8WSV
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Pre-binding structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) in presence of sub optimal concentration of 4-hydroxy benzoic acid
分子名称: P-HYDROXYBENZOIC ACID, Transcriptional regulator HosA
著者Goswami, A, Raju, R, Kasarla, M, Ullah, S.
登録日2023-10-17
公開日2024-08-28
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Pre-binding structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) in presence of sub optimal concentration of 4-hydroxy benzoic acid
Biorxiv, 2024
8XB7
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HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) bound with 4-hydroxy benzoic acid - Conformation II at 2.6 angstrom resolution
分子名称: P-HYDROXYBENZOIC ACID, Transcriptional regulator HosA
著者Goswami, A, Raju, R, Kasarla, M.
登録日2023-12-06
公開日2024-08-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Pre-binding structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) in presence of sub optimal concentration of 4-hydroxy benzoic acid
Biorxiv, 2024
5KR8
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(4~{S},6~{S})-4-[2,4-bis(fluoranyl)phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine (compound 5) bound to BACE1
分子名称: (4~{S},6~{S})-4-[2,4-bis(fluoranyl)phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine, Beta-secretase 1, IODIDE ION
著者Lewis, H.A, Wu, Y.J, Rajamani, R, Thompson, L.A.
登録日2016-07-07
公開日2016-09-07
最終更新日2016-10-05
実験手法X-RAY DIFFRACTION (2.118 Å)
主引用文献Discovery of S3-Truncated, C-6 Heteroaryl Substituted Aminothiazine beta-Site APP Cleaving Enzyme-1 (BACE1) Inhibitors.
J.Med.Chem., 59, 2016
1D5D
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The role of phenylalanine 8 in the stabilization of the s protein-s peptide interaction: packing and cavities
分子名称: RNASE S, S PEPTIDE, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-10-07
公開日1999-10-20
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1D5H
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Rnase s(f8a). mutant ribonucleasE S.
分子名称: RNASE S, S PEPTIDE, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-10-07
公開日1999-10-20
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
2RLN
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THERMODYNAMIC AND STRUCTURAL CONSEQUENCES OF CHANGING A SULPHUR ATOM TO A METHYLENE GROUP IN THE M13NLE MUTATION IN RIBONUCLEASE S
分子名称: RIBONUCLEASE, RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Ratnaparkhi, G, Varadarajan, R.
登録日1994-07-11
公開日1994-11-01
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Thermodynamic and structural consequences of changing a sulfur atom to a methylene group in the M13Nle mutation in ribonuclease-S.
Biochemistry, 33, 1994
4ZNP
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The structure of A pfI Riboswitch Bound to ZMP
分子名称: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, MAGNESIUM ION, pfI Riboswitch
著者Ren, A, Patel, D.J, Rajashankar, R.K.
登録日2015-05-05
公開日2015-08-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Global RNA Fold and Molecular Recognition for a pfl Riboswitch Bound to ZMP, a Master Regulator of One-Carbon Metabolism.
Structure, 23, 2015
1J80
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Osmolyte Stabilization of RNase
分子名称: RIBONUCLEASE PANCREATIC, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日2001-05-19
公開日2001-06-06
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
1A19
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BARSTAR (FREE), C82A MUTANT
分子名称: BARSTAR
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1997-12-25
公開日1998-04-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Discrepancies between the NMR and X-ray structures of uncomplexed barstar: analysis suggests that packing densities of protein structures determined by NMR are unreliable.
Biochemistry, 37, 1998
1J82
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Osmolyte Stabilization of RNase
分子名称: RIBONUCLEASE PANCREATIC, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日2001-05-19
公開日2001-06-06
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
1NKG
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BU of 1nkg by Molmil
Rhamnogalacturonan lyase from Aspergillus aculeatus
分子名称: CALCIUM ION, Rhamnogalacturonase B, SULFATE ION
著者McDonough, M.A, Kadirvelraj, R, Harris, P, Poulsen, J.C, Larsen, S.
登録日2003-01-03
公開日2004-05-25
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Rhamnogalacturonan lyase reveals a unique three-domain modular structure for polysaccharide lyase family 4.
Febs Lett., 565, 2004
1J7Z
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Osmolyte Stabilization of Ribonuclease
分子名称: RIBONUCLEASE PANCREATIC, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日2001-05-19
公開日2001-06-06
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
1J81
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Osmolyte Stabilization of RNase
分子名称: RIBONUCLEASE PANCREATIC, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日2001-05-19
公開日2001-06-06
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
1D5E
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The role of phenylalanine 8 in the stabilization of the S protein-S peptide interaction: Packing and cavities
分子名称: RNASE S, S PEPTIDE, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-10-07
公開日1999-10-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1FEV
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BU of 1fev by Molmil
CRYSTAL STRUCTURE OF THE ALA4AIB MUTATION IN RNASE S
分子名称: S PEPTIDE, S PROTEIN, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日2000-07-23
公開日2000-08-09
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and thermodynamic consequences of introducing alpha-aminoisobutyric acid in the S peptide of ribonuclease S.
Protein Eng., 13, 2000
1CJQ
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X-RAY CRYSTALLOGRAPHIC STUDIES OF THE DENATURATION OF THE DENATURATION OF RIBONUCLEASE S.
分子名称: PROTEIN (RIBONUCLEASE S), SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-04-19
公開日1999-05-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献X-ray crystallographic studies of the denaturation of ribonuclease S.
Proteins, 36, 1999
1XP8
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Deinococcus radiodurans RecA in complex with ATP-gamma-S
分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RecA protein
著者Bell, C.E, Rajan, R.
登録日2004-10-08
公開日2004-12-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of RecA from Deinococcus radiodurans: insights into the structural basis of extreme radioresistance.
J.Mol.Biol., 344, 2004
5VCR
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Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase with bound uranium dioxide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, CHLORIDE ION, ...
著者Sanders, J.H, Kadirvelraj, R, Wood, Z.A.
登録日2017-03-31
公開日2018-04-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.992 Å)
主引用文献HumanN-acetylglucosaminyltransferase II substrate recognition uses a modular architecture that includes a convergent exosite.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1CJR
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X-RAY CRYSTALLOGRAPHIC STUDIES OF DENATURATION IN RIBONUCLEASE S
分子名称: PROTEIN (RIBONUCLEASE S), SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-04-19
公開日1999-05-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray crystallographic studies of the denaturation of ribonuclease S.
Proteins, 36, 1999
2RNS
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REFINEMENT OF THE CRYSTAL STRUCTURE OF RIBONUCLEASE S. COMPARISON WITH AND BETWEEN THE VARIOUS RIBONUCLEASE A STRUCTURES
分子名称: RIBONUCLEASE S, SULFATE ION
著者Kim, E.E, Varadarajan, R, Wyckoff, H.W, Richards, F.M.
登録日1992-02-19
公開日1994-01-31
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Refinement of the crystal structure of ribonuclease S. Comparison with and between the various ribonuclease A structures.
Biochemistry, 31, 1992
5VCM
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Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase with bound UDP and Manganese
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, ...
著者Sanders, J.H, Kadirvelraj, R, Wood, Z.A.
登録日2017-03-31
公開日2018-04-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献HumanN-acetylglucosaminyltransferase II substrate recognition uses a modular architecture that includes a convergent exosite.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3CWG
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Unphosphorylated mouse STAT3 core fragment
分子名称: Signal transducer and activator of transcription 3
著者Ren, Z, Mao, X, Mertens, C, Krishnaraj, R, Qin, J, Mandal, P.K, Romanowshi, M.J, McMurray, J.S.
登録日2008-04-21
公開日2008-07-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Crystal structure of unphosphorylated STAT3 core fragment.
Biochem.Biophys.Res.Commun., 374, 2008

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