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PDB: 50 results

6U0Q
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BU of 6u0q by Molmil
Transthyretin in complex with (E)-5,5'-(ethene-1,2-diyl)bis(1,1-dihydroxy-3-oxo-1,3-dihydrobenzo[c][1,2]oxaborol-1-uide)
Descriptor: 3-[(~{E})-2-[7,7-bis(oxidanyl)-9-oxidanylidene-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-3-yl]ethenyl]-7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-trien-9-one, Transthyretin
Authors:Windsor, I.W, Graham, B.J, Raines, R.T.
Deposit date:2019-08-14
Release date:2021-01-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Boronic acid with high oxidative stability and utility in biological contexts.
Proc.Natl.Acad.Sci.USA, 118, 2021
8ESX
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BU of 8esx by Molmil
HIV protease in complex with benzoxaborolone analog of darunavir
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Windsor, I.W, Graham, B.J, Raines, R.T.
Deposit date:2022-10-15
Release date:2023-02-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Inhibition of HIV-1 Protease by a Boronic Acid with High Oxidative Stability.
Acs Med.Chem.Lett., 14, 2023
8ESY
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BU of 8esy by Molmil
D30N mutant HIV protease in complex with benzoxaborolone analog of darunavir
Descriptor: CHLORIDE ION, GLYCEROL, Protease, ...
Authors:Windsor, I.W, Graham, B.J, Raines, R.T.
Deposit date:2022-10-15
Release date:2023-02-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Inhibition of HIV-1 Protease by a Boronic Acid with High Oxidative Stability.
Acs Med.Chem.Lett., 14, 2023
4PER
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BU of 4per by Molmil
Structure of Gallus gallus ribonuclease inhibitor complexed with Gallus gallus ribonuclease I
Descriptor: Angiogenin, Ribonuclease Inhibitor
Authors:Bianchetti, C.M, Lomax, J.E, Raines, R.T, Fox, B.G.
Deposit date:2014-04-24
Release date:2014-06-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
4PEQ
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BU of 4peq by Molmil
Structure of bovine ribonuclease inhibitor complexed with bovine ribonuclease I
Descriptor: Ribonuclease pancreatic, Ribonuclease/angiogenin inhibitor 1
Authors:Bianchetti, C.M, Lomax, J.E, Raines, R.T, Fox, B.G.
Deposit date:2014-04-24
Release date:2014-06-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.211 Å)
Cite:Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
4RSD
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BU of 4rsd by Molmil
STRUCTURE OF THE D121A VARIANT OF RIBONUCLEASE A
Descriptor: ACETATE ION, CHLORIDE ION, RIBONUCLEASE A
Authors:Schultz, L.W, Quirk, D.J, Raines, R.T.
Deposit date:1998-02-05
Release date:1998-07-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:His...Asp catalytic dyad of ribonuclease A: structure and function of the wild-type, D121N, and D121A enzymes.
Biochemistry, 37, 1998
4RSK
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BU of 4rsk by Molmil
STRUCTURE OF THE K7A/R10A/K66A VARIANT OF RIBONUCLEASE A COMPLEXED WITH 3'-UMP
Descriptor: 3'-URIDINEMONOPHOSPHATE, RIBONUCLEASE A
Authors:Schultz, L.W, Fisher, B.M, Raines, R.T.
Deposit date:1998-04-09
Release date:1998-12-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Coulombic Effects of Remote Subsites on the Active Site of Ribonuclease A
Biochemistry, 37, 1998
6USC
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BU of 6usc by Molmil
Structure of Human Intelectin-1 in complex with KO
Descriptor: CALCIUM ION, CHLORIDE ION, Intelectin-1, ...
Authors:Windsor, I.W, Isabella, C.R, Kosma, P, Raines, R.T, Kiessling, L.L.
Deposit date:2019-10-25
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Stereoelectronic Effects Impact Glycan Recognition.
J.Am.Chem.Soc., 142, 2020
3RSD
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BU of 3rsd by Molmil
STRUCTURE OF THE D121N VARIANT OF RIBONUCLEASE A
Descriptor: RIBONUCLEASE A
Authors:Schultz, L.W, Quirk, D.J, Raines, R.T.
Deposit date:1998-02-05
Release date:1998-07-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:His...Asp catalytic dyad of ribonuclease A: structure and function of the wild-type, D121N, and D121A enzymes.
Biochemistry, 37, 1998
3RSK
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BU of 3rsk by Molmil
STRUCTURE OF THE K7A/R10A/K66A VARIANT OF RIBONUCLEASE A
Descriptor: ACETATE ION, RIBONUCLEASE A
Authors:Schultz, L.W, Fisher, B.M, Raines, R.T.
Deposit date:1998-04-09
Release date:1998-07-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Coulombic Effects of Remote Subsites on the Active Site of Ribonuclease A
Biochemistry, 37, 1998
2XOI
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BU of 2xoi by Molmil
Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A
Descriptor: (2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-N-[[(2S,3S,4R,5R)-5-(2,4-DIOXOPYRIMIDIN-1-YL)-4-HYDROXY-2-(HYDROXYMETHYL)OXOLAN-3-YL]METHYLSULFONYL]-3,4-DIHYDROXY-OXOLANE-2-CARBOXAMIDE, RIBONUCLEASE PANCREATIC
Authors:Thiyagarajan, N, Smith, B.D, Raines, R.T, Acharya, K.R.
Deposit date:2010-08-17
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A.
FEBS J., 278, 2011
2XOG
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BU of 2xog by Molmil
Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A
Descriptor: (2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-N-[[(2S,3S,4R,5R)-5-(2,4-DIOXOPYRIMIDIN-1-YL)-4-HYDROXY-2-(HYDROXYMETHYL)OXOLAN-3-YL]METHYLSULFONYL]-3,4-DIHYDROXY-OXOLANE-2-CARBOXAMIDE, RIBONUCLEASE PANCREATIC
Authors:Thiyagarajan, N, Smith, B.D, Raines, R.T, Acharya, K.R.
Deposit date:2010-08-16
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A.
FEBS J., 278, 2011
6C8Y
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BU of 6c8y by Molmil
D30N HIV-1 protease in complex with a phenylboronic acid (P2') analog of darunavir
Descriptor: CHLORIDE ION, GLYCEROL, Protease, ...
Authors:Windsor, I.W, Raines, R.T, Forest, K.T.
Deposit date:2018-01-25
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.942 Å)
Cite:Sub-picomolar Inhibition of HIV-1 Protease with a Boronic Acid.
J. Am. Chem. Soc., 140, 2018
6C8X
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BU of 6c8x by Molmil
Wild-type HIV-1 protease in complex with a phenylboronic acid (P2') analog of darunavir
Descriptor: CHLORIDE ION, GLYCEROL, Protease, ...
Authors:Windsor, I.W, Raines, R.T, Forest, K.T.
Deposit date:2018-01-25
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.613 Å)
Cite:Sub-picomolar Inhibition of HIV-1 Protease with a Boronic Acid.
J. Am. Chem. Soc., 140, 2018
6BRA
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BU of 6bra by Molmil
HIV-1 protease (D25N, inactive) in complex with phage display optimized substrate SGIFLETS
Descriptor: CHLORIDE ION, Phage display-optimized HIV-1 protease substrate, Protease
Authors:Windsor, I.W, Raines, R.T.
Deposit date:2017-11-30
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.111 Å)
Cite:A substrate selected by phage display exhibits enhanced side-chain hydrogen bonding to HIV-1 protease.
Acta Crystallogr D Struct Biol, 74, 2018
1W4Q
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BU of 1w4q by Molmil
Binding of Nonnatural 3'-Nucleotides to Ribonuclease A
Descriptor: 2'-FLUORO-2'-DEOXYURIDINE 3'-MONOPHOSPHATE, PANCREATIC RIBONUCLEASE A
Authors:Jenkins, C.L, Thiyagarajan, N, Sweeney, R.Y, Guy, M.P, Kelemen, B.R, Acharya, K.R, Raines, R.T.
Deposit date:2004-07-27
Release date:2005-02-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Binding of Non-Natural 3'-Nucleotides to Ribonuclease A
FEBS J., 272, 2005
1W4O
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BU of 1w4o by Molmil
Binding of Nonnatural 3'-Nucleotides to Ribonuclease A
Descriptor: PANCREATIC RIBONUCLEASE A, URACIL ARABINOSE-3'-PHOSPHATE
Authors:Jenkins, C.L, Thiyagarajan, N, Sweeney, R.Y, Guy, M.P, Kelemen, B.R, Acharya, K.R, Raines, R.T.
Deposit date:2004-07-27
Release date:2005-02-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Binding of Non-Natural 3'-Nucleotides to Ribonuclease A
FEBS J., 272, 2005
1W4P
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BU of 1w4p by Molmil
Binding of Nonnatural 3'-Nucleotides to Ribonuclease A
Descriptor: 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, PANCREATIC RIBONUCLEASE A
Authors:Jenkins, C.L, Thiyagarajan, N, Sweeney, R.Y, Guy, M.P, Kelemen, B.R, Acharya, K.R, Raines, R.T.
Deposit date:2004-07-27
Release date:2005-02-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Binding of Non-Natural 3'-Nucleotides to Ribonuclease A
FEBS J., 272, 2005
4O89
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BU of 4o89 by Molmil
Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus horikoshii.
Descriptor: CITRIC ACID, RNA 3'-terminal phosphate cyclase
Authors:Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
Deposit date:2013-12-26
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of RNA 3'-phosphate cyclase bound to substrate RNA.
Rna, 20, 2014
4O8J
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BU of 4o8j by Molmil
Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus horikoshii, in complex with rACAAA3'phosphate and adenine.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE, RNA, ...
Authors:Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
Deposit date:2013-12-27
Release date:2014-09-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of RNA 3'-phosphate cyclase bound to substrate RNA.
Rna, 20, 2014
4N2P
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BU of 4n2p by Molmil
Structure of Archease from Pyrococcus horikoshii
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
Deposit date:2013-10-05
Release date:2014-01-01
Last modified:2020-09-23
Method:X-RAY DIFFRACTION (1.435 Å)
Cite:A tRNA splicing operon: Archease endows RtcB with dual GTP/ATP cofactor specificity and accelerates RNA ligation.
Nucleic Acids Res., 42, 2014
3RSP
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BU of 3rsp by Molmil
STRUCTURE OF THE P93G VARIANT OF RIBONUCLEASE A
Descriptor: CHLORIDE ION, RIBONUCLEASE A
Authors:Schultz, L.W, Hargraves, S.R, Klink, T.A, Raines, R.T.
Deposit date:1997-10-20
Release date:1998-04-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and stability of the P93G variant of ribonuclease A.
Protein Sci., 7, 1998
3TSR
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BU of 3tsr by Molmil
X-ray structure of mouse ribonuclease inhibitor complexed with mouse ribonuclease 1
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Ribonuclease inhibitor, ...
Authors:Chang, A, Lomax, J.E, Bingman, C.A, Raines, R.T, Phillips Jr, G.N.
Deposit date:2011-09-13
Release date:2012-09-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1999 Å)
Cite:Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
4ISJ
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BU of 4isj by Molmil
RNA Ligase RtcB in complex with Mn(II)
Descriptor: MANGANESE (II) ION, SULFATE ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
Authors:Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
Deposit date:2013-01-16
Release date:2013-03-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.344 Å)
Cite:Structures of the Noncanonical RNA Ligase RtcB Reveal the Mechanism of Histidine Guanylylation.
Biochemistry, 52, 2013
4IT0
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BU of 4it0 by Molmil
Structure of the RNA ligase RtcB-GMP/Mn(II) complex
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
Authors:Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
Deposit date:2013-01-17
Release date:2013-03-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of the Noncanonical RNA Ligase RtcB Reveal the Mechanism of Histidine Guanylylation.
Biochemistry, 52, 2013

 

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