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PDB: 907 results

4LVY
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BU of 4lvy by Molmil
Structure of the THF riboswitch bound to pemetrexed
Descriptor: 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, THF riboswitch
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2013-07-26
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch.
Chem.Biol., 21, 2014
4RR0
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BU of 4rr0 by Molmil
re-refined 1vcw, CRYSTAL STRUCTURE OF DEGS AFTER BACKSOAKING THE ACTIVATING PEPTIDE
Descriptor: Protease degS
Authors:Sauer, R.T, Grant, R.A.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.054 Å)
Cite:A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4LVV
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BU of 4lvv by Molmil
Structure of the THF riboswitch
Descriptor: N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, THF riboswitch
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2013-07-26
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch.
Chem.Biol., 21, 2014
4LW0
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BU of 4lw0 by Molmil
Structure of the THF riboswitch bound to adenine
Descriptor: ADENINE, THF riboswitch
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2013-07-26
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.889 Å)
Cite:A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch.
Chem.Biol., 21, 2014
4TSR
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BU of 4tsr by Molmil
The Complex Structure of Mutant Phytase with IHS
Descriptor: D-MYO-INOSITOL-HEXASULPHATE, NICKEL (II) ION, Periplasmic AppA protein
Authors:Wu, T.H, Chen, C.C, Huang, C.H, Guo, R.T.
Deposit date:2014-06-19
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The Complex Structure of mutant Phytase with IHS
To Be Published
4RQY
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BU of 4rqy by Molmil
RE-REFINED STRUCTURE OF 1TE0 - STRUCTURAL ANALYSIS of DEGS, A STRESS SENSOR OF THE BACTERIAL PERIPLASM
Descriptor: PHOSPHATE ION, Protease degS
Authors:Sauer, R.T, Grant, R.A.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR1
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BU of 4rr1 by Molmil
re-refinement of entry 1sot, Crystal Structure of the DegS stress sensor
Descriptor: NICKEL (II) ION, PHOSPHATE ION, Protease degS
Authors:Sauer, R.T, Grant, R.A.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2015-03-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4U0G
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BU of 4u0g by Molmil
Crystal Structure of M. tuberculosis ClpP1P2 bound to ADEP and agonist
Descriptor: ADEP-2B5Me, ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2, ...
Authors:Schmitz, K.R, Carney, D.W, Sello, J.K, Sauer, R.T.
Deposit date:2014-07-11
Release date:2014-10-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.1978 Å)
Cite:Crystal structure of Mycobacterium tuberculosis ClpP1P2 suggests a model for peptidase activation by AAA+ partner binding and substrate delivery.
Proc.Natl.Acad.Sci.USA, 111, 2014
4U0H
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BU of 4u0h by Molmil
Crystal Structure of M. tuberculosis ClpP1P1
Descriptor: ATP-dependent Clp protease proteolytic subunit 1, SULFATE ION
Authors:Schmitz, K.R, Carney, D.W, Sello, J.K, Sauer, R.T.
Deposit date:2014-07-11
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.2479 Å)
Cite:Crystal structure of Mycobacterium tuberculosis ClpP1P2 suggests a model for peptidase activation by AAA+ partner binding and substrate delivery.
Proc.Natl.Acad.Sci.USA, 111, 2014
4U5I
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BU of 4u5i by Molmil
Complex structure of mutant CtCel5E (E314A) with xylobiose
Descriptor: Endoglucanase H, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Guo, R.T, Huang, C.H, Wu, T.H.
Deposit date:2014-07-25
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biochemical Characterization and Structural Analysis of a Bifunctional Cellulase/Xylanase from Clostridium thermocellum
J.Biol.Chem., 290, 2015
4U5K
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BU of 4u5k by Molmil
Complex structure of mutant CtCel5E (E314A) with cellobiose
Descriptor: Endoglucanase H, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Guo, R.T, Huang, C.H, Wu, T.H.
Deposit date:2014-07-25
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Biochemical Characterization and Structural Analysis of a Bifunctional Cellulase/Xylanase from Clostridium thermocellum
J.Biol.Chem., 290, 2015
7CWQ
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BU of 7cwq by Molmil
Crystal structure of a novel cutinase from Burkhoderiales bacterium RIFCSPLOWO2_02_FULL_57_36
Descriptor: DLH domain-containing protein, SULFATE ION
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2020-08-30
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:General features to enhance enzymatic activity of poly(ethylene terephthalate) hydrolysis.
Nat Catal, 4, 2021
7CQB
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BU of 7cqb by Molmil
Crystal structure of mutant of a Petase mutant
Descriptor: Poly(ethylene terephthalate) hydrolase
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2020-08-09
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of mutant of a Petase mutant
to be published
7CY0
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BU of 7cy0 by Molmil
Crystal structure of S185H mutant PET hydrolase from Ideonella sakaiensis
Descriptor: ACETIC ACID, Poly(ethylene terephthalate) hydrolase
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2020-09-03
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:General features to enhance enzymatic activity of poly(ethylene terephthalate) hydrolysis.
Nat Catal, 4, 2021
3L0E
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BU of 3l0e by Molmil
X-ray crystal structure of a Potent Liver X Receptor Modulator
Descriptor: N-(2-chloro-6-fluorobenzyl)-1-methyl-N-{[3'-(methylsulfonyl)biphenyl-4-yl]methyl}-1H-imidazole-4-sulfonamide, Nuclear receptor coactivator 2, Oxysterols receptor LXR-beta
Authors:Gampe Jr, R.T.
Deposit date:2009-12-09
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of tertiary sulfonamides as potent liver X receptor antagonists.
J.Med.Chem., 53, 2010
6QQ1
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BU of 6qq1 by Molmil
Crystal structure of as isolated Y323F mutant of haem-Cu containing nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Antonyuk, S.V, Shenoy, R.T, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S.
Deposit date:2019-02-16
Release date:2019-11-06
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis.
Acs Catalysis, 9, 2019
6QPV
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BU of 6qpv by Molmil
Crystal structure of as isolated Y323A mutant of haem-Cu containing nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, HEME C
Authors:Antonyuk, S.V, Shenoy, R.T, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S.
Deposit date:2019-02-15
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis.
Acs Catalysis, 9, 2019
6QQ0
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BU of 6qq0 by Molmil
Crystal structure of nitrite bound Y323E mutant of haem-Cu containing nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Antonyuk, S.V, Shenoy, R.T, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S.
Deposit date:2019-02-16
Release date:2019-11-06
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis.
Acs Catalysis, 9, 2019
6QPZ
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BU of 6qpz by Molmil
Crystal structure of as isolated Y323E mutant of haem-Cu containing nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Antonyuk, S.V, Shenoy, R.T, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S.
Deposit date:2019-02-16
Release date:2019-11-06
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis.
Acs Catalysis, 9, 2019
8U9O
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BU of 8u9o by Molmil
Solution structure of RsgI9 CRE domain from C. thermocellum
Descriptor: Anti-sigma-I factor RsgI9
Authors:Takayesu, A, Mahoney, B.J, Clubb, R.T.
Deposit date:2023-09-19
Release date:2024-04-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insight into the autoproteolysis mechanism of the RsgI9 anti-sigma factor from Clostridium thermocellum.
Proteins, 2024
7Y8L
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BU of 7y8l by Molmil
Structure of ScIRED-R2-V3 from Streptomyces clavuligerus in complex with 5-(2,5-difluorophenyl)-3,4-dihydro-2H-pyrrole
Descriptor: 5-[2,5-bis(fluoranyl)phenyl]-3,4-dihydro-2~{H}-pyrrole, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Zhang, L.L, Liu, W.D, Shi, M, Huang, J.W, Yang, Y, Chen, C.C, Guo, R.T.
Deposit date:2022-06-24
Release date:2023-06-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Engineered Imine Reductase for Larotrectinib Intermediate Manufacture
Acs Catalysis, 12, 2022
6R4L
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BU of 6r4l by Molmil
Crystal structure of S. cerevisia Niemann-Pick type C protein NCR1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ERGOSTEROL, NPC intracellular cholesterol transporter 1-related protein 1, ...
Authors:Winkler, M.B.L, Kidmose, R.T, Pedersen, B.P.
Deposit date:2019-03-22
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Insight into Eukaryotic Sterol Transport through Niemann-Pick Type C Proteins.
Cell, 179, 2019
966C
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BU of 966c by Molmil
CRYSTAL STRUCTURE OF FIBROBLAST COLLAGENASE-1 COMPLEXED TO A DIPHENYL-ETHER SULPHONE BASED HYDROXAMIC ACID
Descriptor: CALCIUM ION, MMP-1, N-HYDROXY-2-[4-(4-PHENOXY-BENZENESULFONYL)-TETRAHYDRO-PYRAN-4-YL]-ACETAMIDE, ...
Authors:Lovejoy, B, Welch, A, Carr, S, Luong, C, Broka, C, Hendricks, R.T, Campbell, J, Walker, K, Martin, R, Van Wart, H, Browner, M.F.
Deposit date:1998-08-07
Release date:1999-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of MMP-1 and -13 reveal the structural basis for selectivity of collagenase inhibitors.
Nat.Struct.Biol., 6, 1999
7XWI
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BU of 7xwi by Molmil
structure of patulin-detoxifying enzyme with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase
Authors:Dai, L, Li, H, Hu, Y, Guo, R.T, Chen, C.C.
Deposit date:2022-05-26
Release date:2022-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure-based rational design of a short-chain dehydrogenase/reductase for improving activity toward mycotoxin patulin.
Int.J.Biol.Macromol., 222, 2022
7XWJ
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BU of 7xwj by Molmil
structure of patulin-detoxifying enzyme Y155F with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase
Authors:Dai, L, Li, H, Hu, Y, Guo, R.T, Chen, C.C.
Deposit date:2022-05-26
Release date:2022-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure-based rational design of a short-chain dehydrogenase/reductase for improving activity toward mycotoxin patulin.
Int.J.Biol.Macromol., 222, 2022

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