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PDB: 920 results

3L0E
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BU of 3l0e by Molmil
X-ray crystal structure of a Potent Liver X Receptor Modulator
Descriptor: N-(2-chloro-6-fluorobenzyl)-1-methyl-N-{[3'-(methylsulfonyl)biphenyl-4-yl]methyl}-1H-imidazole-4-sulfonamide, Nuclear receptor coactivator 2, Oxysterols receptor LXR-beta
Authors:Gampe Jr, R.T.
Deposit date:2009-12-09
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of tertiary sulfonamides as potent liver X receptor antagonists.
J.Med.Chem., 53, 2010
5KPY
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BU of 5kpy by Molmil
Structure of a 5-hydroxytryptophan aptamer
Descriptor: 5-hydroxy-L-tryptophan, 5-hydroxytryptophan RNA aptamer, IRIDIUM HEXAMMINE ION, ...
Authors:Batey, R.T, Porter, E, Merck, M.
Deposit date:2016-07-05
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recurrent RNA motifs as scaffolds for genetically encodable small-molecule biosensors.
Nat. Chem. Biol., 13, 2017
5JI3
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BU of 5ji3 by Molmil
HslUV complex
Descriptor: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU, ATP-dependent protease subunit HslV
Authors:Grant, R.A, Sauer, R.T, Schmitz, K.R, Baytshtok, V.
Deposit date:2016-04-21
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Structurally Dynamic Region of the HslU Intermediate Domain Controls Protein Degradation and ATP Hydrolysis.
Structure, 24, 2016
5JI2
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BU of 5ji2 by Molmil
HslU L199Q in HslUV complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU, ATP-dependent protease subunit HslV, ...
Authors:Grant, R.A, Sauer, R.T, Schmitz, K.R, Baytshtok, V.
Deposit date:2016-04-21
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.307 Å)
Cite:A Structurally Dynamic Region of the HslU Intermediate Domain Controls Protein Degradation and ATP Hydrolysis.
Structure, 24, 2016
5JQH
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BU of 5jqh by Molmil
Structure of beta2 adrenoceptor bound to carazolol and inactive-state stabilizing nanobody, Nb60
Descriptor: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, CHOLESTEROL, Endolysin,Beta-2 adrenergic receptor, ...
Authors:Staus, D.P, Strachan, R.T, Manglik, A, Pani, B, Kahsai, A.W, Kim, T.H, Wingler, L.M, Ahn, S, Chatterjee, A, Masoudi, A, Kruse, A.C, Pardon, E, Steyaert, J, Weis, W.I, Prosser, R.S, Kobilka, B.K, Costa, T, Lefkowitz, R.J.
Deposit date:2016-05-05
Release date:2016-07-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Allosteric nanobodies reveal the dynamic range and diverse mechanisms of G-protein-coupled receptor activation.
Nature, 535, 2016
5IYS
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BU of 5iys by Molmil
Crystal structure of a dehydrosqualene synthase in complex with ligand
Descriptor: MAGNESIUM ION, Phytoene synthase, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE, ...
Authors:Liu, G.Z, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2016-03-24
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of a dehydrosqualene synthase in complex with ligand
to be published
2HDD
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BU of 2hdd by Molmil
ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
Descriptor: DNA (5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*G P*CP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*C P*CP*GP*GP*A)-3'), PROTEIN (ENGRAILED HOMEODOMAIN Q50K)
Authors:Tucker-Kellogg, L, Rould, M.A, Chambers, K.A, Ades, S.E, Sauer, R.T, Pabo, C.O.
Deposit date:1998-02-10
Release date:1998-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engrailed (Gln50-->Lys) homeodomain-DNA complex at 1.9 A resolution: structural basis for enhanced affinity and altered specificity.
Structure, 5, 1997
1U26
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BU of 1u26 by Molmil
Crystal structure of Selenomonas ruminantium phytase complexed with persulfated phytate
Descriptor: D-MYO-INOSITOL-HEXASULPHATE, myo-inositol hexaphosphate phosphohydrolase
Authors:Chu, H.M, Guo, R.T, Lin, T.W, Chou, C.C, Shr, H.L, Lai, H.L, Tang, T.Y, Cheng, K.J, Selinger, B.L, Wang, A.H.-J.
Deposit date:2004-07-16
Release date:2004-11-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of Selenomonas ruminantium Phytase in Complex with Persulfated Phytate; DSP Phytase Fold and Mechanism for Sequential Substrate Hydrolysis
STRUCTURE, 12, 2004
1TWB
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BU of 1twb by Molmil
SspB disulfide crosslinked to an ssrA degradation tag
Descriptor: Stringent starvation protein B homolog, ssrA peptide
Authors:Bolon, D.N, Grant, R.A, Baker, T.A, Sauer, R.T.
Deposit date:2004-06-30
Release date:2004-11-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nucleotide-Dependent Substrate Handoff from the SspB Adaptor to the AAA+ ClpXP Protease.
Mol.Cell, 16, 2004
1U9P
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BU of 1u9p by Molmil
Permuted single-chain Arc
Descriptor: pArc
Authors:Tabtiang, R.K, Cezairliyan, B.O, Grant, R.A, Cochrane, J.C, Sauer, R.T.
Deposit date:2004-08-10
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Consolidating critical binding determinants by noncyclic rearrangement of protein secondary structure
Proc.Natl.Acad.Sci.Usa, 102, 2005
1TNT
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BU of 1tnt by Molmil
A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
Descriptor: MU-TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1994-10-10
Release date:1995-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
1TNS
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BU of 1tns by Molmil
A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
Descriptor: MU-TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1994-10-10
Release date:1995-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
3QZ0
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BU of 3qz0 by Molmil
Structure of Treponema denticola Factor H Binding protein (FhbB), selenomethionine derivative
Descriptor: Factor H binding protein, GLYCEROL, THIOCYANATE ION
Authors:Miller, D.P, McDowell, J.V, Heroux, A, Bell, J.K, Marconi, R.T, Conrad, D.H, Burgner, J.W.
Deposit date:2011-03-04
Release date:2012-03-07
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure of factor H-binding protein B (FhbB) of the periopathogen, Treponema denticola: insights into progression of periodontal disease.
J.Biol.Chem., 287, 2012
3R15
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BU of 3r15 by Molmil
Structure Treponema Denticola Factor H Binding Protein
Descriptor: Factor H binding protein, THIOCYANATE ION
Authors:Miller, D.P, McDowell, J.V, Burgner, J, Heroux, A, Bell, J.K, Marconi, R.T.
Deposit date:2011-03-09
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structure Treponema Denticola Factor H Binding Protein
To be Published
6LNH
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BU of 6lnh by Molmil
Crystal structure of IDO from Bacillus thuringiensis
Descriptor: FE (III) ION, L-isoleucine-4-hydroxylase, MERCURY (II) ION
Authors:Feng, Y, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2019-12-30
Release date:2021-01-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of IDO from Bacillus thuringiensis
to be published
6NCJ
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BU of 6ncj by Molmil
Structure of HIV-1 Integrase with potent 5,6,7,8-Tetrahydro-1,6-naphthyridine Derivatives Allosteric Site Inhibitors
Descriptor: (2~{S})-2-[4-(8-fluoranyl-5-methyl-3,4-dihydro-2~{H}-chromen-6-yl)-2-methyl-6-[[(1~{S},2~{R})-2-phenylcyclopropyl]methyl]-7,8-dihydro-5~{H}-1,6-naphthyridin-3-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, 1,2-ETHANEDIOL, Integrase, ...
Authors:Nolte, R.T.
Deposit date:2018-12-11
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:5,6,7,8-Tetrahydro-1,6-naphthyridine Derivatives as Potent HIV-1-Integrase-Allosteric-Site Inhibitors.
J. Med. Chem., 62, 2019
6UC8
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BU of 6uc8 by Molmil
Guanine riboswitch bound to 8-aminoguanine
Descriptor: 8-AMINOGUANINE, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Matyjasik, M.M, Hall, S.D, Batey, R.T.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
6UC9
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BU of 6uc9 by Molmil
Guanine riboswitch bound to O6-cyclohexylmethyl guanine
Descriptor: 6-O-CYCLOHEXYLMETHYL GUANINE, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Matyjasik, M.M, Batey, R.T.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.941 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
6TL1
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BU of 6tl1 by Molmil
Crystal structure of the TASOR pseudo-PARP domain
Descriptor: GLYCEROL, Protein TASOR
Authors:Douse, C.H, Timms, R.T, Freund, S.M.V, Modis, Y.
Deposit date:2019-11-29
Release date:2020-09-16
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:TASOR is a pseudo-PARP that directs HUSH complex assembly and epigenetic transposon control.
Nat Commun, 11, 2020
6UBU
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BU of 6ubu by Molmil
1.60 A resolution structure of the guanine riboswitch bound to guanine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), GUANINE, ...
Authors:Matyjasik, M.M, Batey, R.T.
Deposit date:2019-09-13
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
6U0Q
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BU of 6u0q by Molmil
Transthyretin in complex with (E)-5,5'-(ethene-1,2-diyl)bis(1,1-dihydroxy-3-oxo-1,3-dihydrobenzo[c][1,2]oxaborol-1-uide)
Descriptor: 3-[(~{E})-2-[7,7-bis(oxidanyl)-9-oxidanylidene-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-3-yl]ethenyl]-7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-trien-9-one, Transthyretin
Authors:Windsor, I.W, Graham, B.J, Raines, R.T.
Deposit date:2019-08-14
Release date:2021-01-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Boronic acid with high oxidative stability and utility in biological contexts.
Proc.Natl.Acad.Sci.USA, 118, 2021
6UC7
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BU of 6uc7 by Molmil
Structure of guanine riboswitch bound to N2-acetyl guanine
Descriptor: COBALT HEXAMMINE(III), N-(6-oxo-6,9-dihydro-3H-purin-2-yl)acetamide, guanine riboswitch
Authors:Matyjasik, M.M, Batey, R.T.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.
Molecules, 25, 2020
5CUX
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BU of 5cux by Molmil
Crystal structure of N-terminal domain truncated Trypanosoma cruzi Vacuolar Soluble Pyrophosphatases in complex with PPi
Descriptor: Acidocalcisomal pyrophosphatase, PHOSPHATE ION, PYROPHOSPHATE 2-
Authors:Liu, W.D, Yang, Y.Y, Ko, T.P, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2015-07-25
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Trypanosoma cruzi protein in complex with ligand
Acs Chem.Biol., 2016
5CUV
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BU of 5cuv by Molmil
Crystal structure of Trypanosoma cruzi Vacuolar Soluble Pyrophosphatases in apo form
Descriptor: Acidocalcisomal pyrophosphatase, D-MALATE, MAGNESIUM ION
Authors:Ko, T.P, Yang, Y.Y, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2015-07-25
Release date:2016-03-02
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of Trypanosoma cruzi protein in complex with ligand
Acs Chem.Biol., 2016
5CUW
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BU of 5cuw by Molmil
Crystal structure of Sortase E1 from Streptomyces coelicolor with tripeptide in the active site
Descriptor: GLYCEROL, SrtE1
Authors:Kattke, M.D, Cascio, D, Sawaya, M.R, Clubb, R.T.
Deposit date:2015-07-25
Release date:2016-08-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Crystal structure of the first class E sortase transpeptidase, SrtE1 from Streptomyces coelicolor
To be published

224201

數據於2024-08-28公開中

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