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PDB: 924 results

3GQU
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BU of 3gqu by Molmil
Pyrococcus Horikoshii NOP5 RNA Binding Domain
Descriptor: IODIDE ION, NOP5P PROTEIN
Authors:Reyes, F.E, Hardin, J.W, Batey, R.T.
Deposit date:2009-03-24
Release date:2009-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of a Critical Interaction within the Archaeal Box C/D Small Ribonucleoprotein Complex
J.Biol.Chem., 284, 2009
3GOT
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BU of 3got by Molmil
Guanine riboswitch C74U mutant bound to 2-fluoroadenine.
Descriptor: 2-fluoroadenine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Reyes, F.E, Batey, R.T.
Deposit date:2009-03-20
Release date:2009-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs
Structure, 17, 2009
3GQ0
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BU of 3gq0 by Molmil
The structure of the Caulobacter crescentus clpS protease adaptor protein - apo structure with no peptide
Descriptor: ATP-dependent Clp protease adapter protein clpS
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-03-23
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.066 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
3GW1
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BU of 3gw1 by Molmil
The structure of the Caulobacter crescentus CLPs protease adaptor protein in complex with FGG tripeptide
Descriptor: ATP-dependent Clp protease adapter protein ClpS, FGG peptide, MAGNESIUM ION
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-03-31
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
3GQ1
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The structure of the caulobacter crescentus clpS protease adaptor protein in complex with a WLFVQRDSKE decapeptide
Descriptor: ATP-dependent Clp protease adapter protein clpS, MAGNESIUM ION, WLFVQRDSKE peptide
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-03-23
Release date:2009-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.496 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
3GX2
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BU of 3gx2 by Molmil
TteSAM-I riboswitch variant A94GU34C bound to sinefungin
Descriptor: MAGNESIUM ION, RNA (94-MER), SINEFUNGIN
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-04-01
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
1STR
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BU of 1str by Molmil
STREPTAVIDIN DIMERIZED BY DISULFIDE-BONDED PEPTIDE AC-CHPQNT-NH2 DIMER
Descriptor: AC-CHPQNT-NH2, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T, Liu, B, Arze, R, Collins, N.
Deposit date:1995-09-12
Release date:1996-03-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Topochemical catalysis achieved by structure-based ligand design.
J.Biol.Chem., 270, 1995
1U25
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BU of 1u25 by Molmil
Crystal structure of Selenomonas ruminantium phytase complexed with persulfated phytate in the C2221 crystal form
Descriptor: D-MYO-INOSITOL-HEXASULPHATE, myo-inositol hexaphosphate phosphohydrolase
Authors:Chu, H.M, Guo, R.T, Lin, T.W, Chou, C.C, Shr, H.L, Lai, H.L, Tang, T.Y, Cheng, K.J, Selinger, B.L, Wang, A.H.-J.
Deposit date:2004-07-16
Release date:2004-11-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of Selenomonas ruminantium Phytase in Complex with Persulfated Phytate; DSP Phytase Fold and Mechanism for Sequential Substrate Hydrolysis
STRUCTURE, 12, 2004
1S0T
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BU of 1s0t by Molmil
Solution structure of a DNA duplex containing an alpha-anomeric adenosine: insights into substrate recognition by endonuclease IV
Descriptor: 5'-D(*Cp*Gp*Tp*Cp*Gp*Tp*Gp*Gp*Ap*C)-3', 5'-D(*Gp*Tp*Cp*Cp*(A3A)p*Cp*Gp*Ap*Cp*G)-3'
Authors:Aramini, J.M, Cleaver, S.H, Pon, R.T, Cunningham, R.P, Germann, M.W.
Deposit date:2004-01-04
Release date:2004-04-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a DNA Duplex Containing an alpha-Anomeric Adenosine: Insights into Substrate Recognition by Endonuclease IV.
J.Mol.Biol., 338, 2004
3IQR
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BU of 3iqr by Molmil
SAM-I riboswitch from T. tencongensis variant A94G bound with SAM
Descriptor: BARIUM ION, S-ADENOSYLMETHIONINE, SAM-I riboswitch
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-08-20
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
3IQN
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Free-state structural transitions of the SAM-I riboswitch
Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-08-20
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
3IQP
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SAM-I riboswitch from T. tencongensis variant A94G apo form
Descriptor: BARIUM ION, SAM-I riboswitch
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-08-20
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
1U26
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BU of 1u26 by Molmil
Crystal structure of Selenomonas ruminantium phytase complexed with persulfated phytate
Descriptor: D-MYO-INOSITOL-HEXASULPHATE, myo-inositol hexaphosphate phosphohydrolase
Authors:Chu, H.M, Guo, R.T, Lin, T.W, Chou, C.C, Shr, H.L, Lai, H.L, Tang, T.Y, Cheng, K.J, Selinger, B.L, Wang, A.H.-J.
Deposit date:2004-07-16
Release date:2004-11-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of Selenomonas ruminantium Phytase in Complex with Persulfated Phytate; DSP Phytase Fold and Mechanism for Sequential Substrate Hydrolysis
STRUCTURE, 12, 2004
1TWB
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BU of 1twb by Molmil
SspB disulfide crosslinked to an ssrA degradation tag
Descriptor: Stringent starvation protein B homolog, ssrA peptide
Authors:Bolon, D.N, Grant, R.A, Baker, T.A, Sauer, R.T.
Deposit date:2004-06-30
Release date:2004-11-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nucleotide-Dependent Substrate Handoff from the SspB Adaptor to the AAA+ ClpXP Protease.
Mol.Cell, 16, 2004
3G19
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BU of 3g19 by Molmil
The structure of the Caulobacter crescentus clpS protease adaptor protein in complex with LLL tripeptide
Descriptor: ATP-dependent Clp protease adapter protein clpS, LLL tripeptide
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-01-29
Release date:2009-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.849 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
3GER
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BU of 3ger by Molmil
Guanine riboswitch bound to 6-chloroguanine
Descriptor: 6-chloroguanine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Batey, R.T.
Deposit date:2009-02-25
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs
Structure, 17, 2009
3G3P
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BU of 3g3p by Molmil
The structure of the M53A Mutant of the Caulobacter crescentus CLPS in complex with a peptide containing an amino-terminal norleucine residue
Descriptor: ATP-dependent Clp protease adapter protein clpS, MAGNESIUM ION, Peptide (NLE)LFVQRDSKE
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-02-02
Release date:2010-03-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.478 Å)
Cite:Structure of Caulobacter crescentus ClpS in complex with various peptides
To be Published
3GAO
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BU of 3gao by Molmil
Crystal structure of the guanine riboswitch bound to xanthine.
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Gilbert, S.D, Batey, R.T.
Deposit date:2009-02-18
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs.
Structure, 17, 2009
1U9P
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BU of 1u9p by Molmil
Permuted single-chain Arc
Descriptor: pArc
Authors:Tabtiang, R.K, Cezairliyan, B.O, Grant, R.A, Cochrane, J.C, Sauer, R.T.
Deposit date:2004-08-10
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Consolidating critical binding determinants by noncyclic rearrangement of protein secondary structure
Proc.Natl.Acad.Sci.Usa, 102, 2005
3HWS
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BU of 3hws by Molmil
Crystal structure of nucleotide-bound hexameric ClpX
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit clpX, MAGNESIUM ION, ...
Authors:Glynn, S.E, Martin, A, Baker, T.A, Sauer, R.T.
Deposit date:2009-06-18
Release date:2009-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine.
Cell(Cambridge,Mass.), 139, 2009
1RO9
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BU of 1ro9 by Molmil
CRYSTAL STRUCTURES OF THE CATALYTIC DOMAIN OF PHOSPHODIESTERASE 4B2B COMPLEXED WITH 8-Br-AMP
Descriptor: 8-BROMO-ADENOSINE-5'-MONOPHOSPHATE, ZINC ION, cAMP-specific 3',5'-cyclic phosphodiesterase 4B
Authors:Xu, R.X, Rocque, W.J, Lambert, M.H, Vanderwall, D.E, Nolte, R.T.
Deposit date:2003-12-01
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structures of the catalytic domain of phosphodiesterase 4B complexed with AMP, 8-Br-AMP, and rolipram.
J.Mol.Biol., 337, 2004
1RDT
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BU of 1rdt by Molmil
Crystal Structure of a new rexinoid bound to the RXRalpha ligand binding doamin in the RXRalpha/PPARgamma heterodimer
Descriptor: (S)-(2E)-3[4-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-2-NAPHTHALENYL)TETRAHYDRO-1-BENZOFURAN-2-YL]-2-PROPENOIC ACID, 2-(2-BENZOYL-PHENYLAMINO)-3-{4-[2-(5-METHYL-2-PHENYL-OXAZOL-4-YL)-ETHOXY]-PHENYL}-PROPIONIC ACID, LxxLL motif coactivator, ...
Authors:Haffner, C.D, Lenhard, J.M, Miller, A.B, McDougald, D.L, Dwornik, K, Ittoop, O.R, Gampe Jr, R.T, Xu, H.E, Blanchard, S, Montana, V.G.
Deposit date:2003-11-06
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based design of potent retinoid X receptor alpha agonists.
J.Med.Chem., 47, 2004
3IPN
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BU of 3ipn by Molmil
Crystal Structure of fluorine and methyl modified collagen: (mepFlpgly)7
Descriptor: CARBONATE ION, Non-natural Collagen
Authors:Satyshur, K.A, Shoulders, M.D, Raines, R.T, Forest, K.T.
Deposit date:2009-08-18
Release date:2010-02-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Stereoelectronic and steric effects in side chains preorganize a protein main chain.
Proc.Natl.Acad.Sci.USA, 107, 2010
1ROR
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BU of 1ror by Molmil
CRYSTAL STRUCTURES OF THE CATALYTIC DOMAIN OF PHOSPHODIESTERASE 4B2B COMPLEXED WITH AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ZINC ION, cAMP-specific 3',5'-cyclic phosphodiesterase 4B
Authors:Xu, R.X, Rocque, W.J, Lambert, M.H, Vanderwall, D.E, Nolte, R.T.
Deposit date:2003-12-02
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the catalytic domain of phosphodiesterase 4B complexed with AMP, 8-Br-AMP, and rolipram.
J.Mol.Biol., 337, 2004
3GOG
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Guanine riboswitch A21G,U75C mutant bound to 6-chloroguanine
Descriptor: 6-chloroguanine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Batey, R.T.
Deposit date:2009-03-19
Release date:2009-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs
Structure, 17, 2009

226707

數據於2024-10-30公開中

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