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PDB: 2931 results

6T6V
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BU of 6t6v by Molmil
Glu-494-Ala inactive monomer of a quinol dependent Nitric Oxide Reductase (qNOR) from Alcaligenes xylosoxidans
Descriptor: CALCIUM ION, Nitric oxide reductase subunit B, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gopalasingam, C.C, Johnson, R.M, Antonyuk, S.V, Muench, S.P, Hasnain, S.S.
Deposit date:2019-10-19
Release date:2020-04-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:The active form of quinol-dependent nitric oxide reductase fromNeisseria meningitidisis a dimer.
Iucrj, 7, 2020
6FPW
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BU of 6fpw by Molmil
Structure of fully reduced Hydrogenase (Hyd-1)
Descriptor: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, FE3-S4 CLUSTER, ...
Authors:Carr, S.B, Armstrong, F.A, Evans, R.M.
Deposit date:2018-02-12
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mechanistic Exploitation of a Self-Repairing, Blocked Proton Transfer Pathway in an O2-Tolerant [NiFe]-Hydrogenase.
J. Am. Chem. Soc., 140, 2018
6FO0
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BU of 6fo0 by Molmil
CryoEM structure of bovine cytochrome bc1 in complex with the anti-malarial compound GSK932121
Descriptor: 3-chloro-6-(hydroxymethyl)-2-methyl-5-{4-[3-(trifluoromethoxy)phenoxy]phenyl}pyridin-4-ol, Chain I/V, Cytochrome b, ...
Authors:Johnson, R.M, Amporndanai, K, O'Neill, P.M, Fishwick, C.W.G, Jamson, A.H, Rawson, S.D, Hasnain, S.S, Antonyuk, S.V, Muench, S.P.
Deposit date:2018-02-05
Release date:2018-02-28
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:X-ray and cryo-EM structures of inhibitor-bound cytochromebc1complexes for structure-based drug discovery.
IUCrJ, 5, 2018
5BNF
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BU of 5bnf by Molmil
Apo structure of porcine CD38
Descriptor: Uncharacterized protein
Authors:Ting, K.Y, Leung, C.P.F, Graeff, R.M, Lee, H.C, Hao, Q, Kotaka, M.
Deposit date:2015-05-26
Release date:2016-05-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Porcine CD38 exhibits prominent secondary NAD(+) cyclase activity.
Protein Sci., 25, 2016
6FUE
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BU of 6fue by Molmil
Periplasmic coiled coil domain of the FapF amyloid transporter
Descriptor: FapF, ISOPROPYL ALCOHOL, SODIUM ION, ...
Authors:Rouse, S.L, Stylianou, F, Morgan, R.M.L, Matthews, S.J.
Deposit date:2018-02-26
Release date:2018-06-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The FapF Amyloid Secretion Transporter Possesses an Atypical Asymmetric Coiled Coil.
J. Mol. Biol., 430, 2018
6G2V
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BU of 6g2v by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
6GAM
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BU of 6gam by Molmil
Structure of E14Q variant of E. coli hydrogenase-2 (as-isolated enzyme)
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, Hydrogenase-2 large chain, ...
Authors:Carr, S.B, Armstrong, F.A, Evans, R.M.
Deposit date:2018-04-11
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanistic Exploitation of a Self-Repairing, Blocked Proton Transfer Pathway in an O2-Tolerant [NiFe]-Hydrogenase.
J. Am. Chem. Soc., 140, 2018
6TP6
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BU of 6tp6 by Molmil
Crystal structure of the Orexin-1 receptor in complex with filorexant
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CHLORIDE ION, Orexin receptor type 1, ...
Authors:Rappas, M, Ali, A, Bennett, K.A, Brown, J.D, Bucknell, S.J, Congreve, M, Cooke, R.M, Cseke, G, de Graaf, C, Dore, A.S, Errey, J.C, Jazayeri, A, Marshall, F.H, Mason, J.S, Mould, R, Patel, J.C, Tehan, B.G, Weir, M, Christopher, J.A.
Deposit date:2019-12-12
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.338 Å)
Cite:Comparison of Orexin 1 and Orexin 2 Ligand Binding Modes Using X-ray Crystallography and Computational Analysis.
J.Med.Chem., 63, 2020
6TQ4
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BU of 6tq4 by Molmil
Crystal structure of the Orexin-1 receptor in complex with Compound 16
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, 2-[1-(phenylsulfonyl)-1,8-diazaspiro[4.5]decan-8-yl]-1,3-benzoxazole, Orexin receptor type 1, ...
Authors:Rappas, M, Ali, A, Bennett, K.A, Brown, J.D, Bucknell, S.J, Congreve, M, Cooke, R.M, Cseke, G, de Graaf, C, Dore, A.S, Errey, J.C, Jazayeri, A, Marshall, F.H, Mason, J.S, Mould, R, Patel, J.C, Tehan, B.G, Weir, M, Christopher, J.A.
Deposit date:2019-12-16
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Comparison of Orexin 1 and Orexin 2 Ligand Binding Modes Using X-ray Crystallography and Computational Analysis.
J.Med.Chem., 63, 2020
6E1P
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BU of 6e1p by Molmil
Structure of AtTPC1(DDE) in state 2
Descriptor: CALCIUM ION, PALMITIC ACID, Two pore calcium channel protein 1
Authors:Kintzer, A.F, Green, E.M, Cheng, Y, Stroud, R.M.
Deposit date:2018-07-10
Release date:2018-09-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis for activation of voltage sensor domains in an ion channel TPC1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6T39
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BU of 6t39 by Molmil
Crystal structure of rsEGFP2 in its off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
6E1N
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BU of 6e1n by Molmil
Structure of AtTPC1(DDE) in state 1
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, CALCIUM ION, PALMITIC ACID, ...
Authors:Kintzer, A.F, Green, E.M, Cheng, Y, Stroud, R.M.
Deposit date:2018-07-10
Release date:2018-09-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis for activation of voltage sensor domains in an ion channel TPC1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6E1K
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BU of 6e1k by Molmil
Structure of AtTPC1(DDE) reconstituted in saposin A with cat06 Fab
Descriptor: CALCIUM ION, PALMITIC ACID, Two pore calcium channel protein 1, ...
Authors:Kintzer, A.F, Green, E.M, Cheng, Y, Stroud, R.M.
Deposit date:2018-07-10
Release date:2018-09-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for activation of voltage sensor domains in an ion channel TPC1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6S08
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BU of 6s08 by Molmil
Crystal Structure of Properdin (TSR domains N1 & 456)
Descriptor: Properdin, SODIUM ION, TRIETHYLENE GLYCOL, ...
Authors:van den Bos, R.M, Pearce, N.M, Gros, P.
Deposit date:2019-06-14
Release date:2019-09-04
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Insights Into Enhanced Complement Activation by Structures of Properdin and Its Complex With the C-Terminal Domain of C3b.
Front Immunol, 10, 2019
6GF0
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BU of 6gf0 by Molmil
Lysozyme structure determined from SFX data using a Sheet-on-Sheet chipless chip
Descriptor: Lysozyme C
Authors:Doak, R.B, Gorel, A, Foucar, L, Gruenbein, M.L, Hilpert, M, Kloos, M, Nass Kovacs, G, Roome, C, Shoeman, R.L, Stricker, M, Tono, K, You, D, Ueda, K, Sherrel, D, Owen, R, Barends, T.R.M, Schlichting, I.
Deposit date:2018-04-27
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystallography on a chip - without the chip: sheet-on-sheet sandwich.
Acta Crystallogr D Struct Biol, 74, 2018
6GND
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BU of 6gnd by Molmil
Crystal structure of the complex of a Ferredoxin-Flavin Thioredoxin Reductase and a Thioredoxin from Clostridium acetobutylicum at 2.9 A resolution
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin, ...
Authors:Buey, R.M, Fernandez-Justel, D, Balsera, M.
Deposit date:2018-05-30
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.889 Å)
Cite:Ferredoxin-linked flavoenzyme defines a family of pyridine nucleotide-independent thioredoxin reductases.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5DCH
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BU of 5dch by Molmil
Crystal structure of Pseudomonas aeruginosa DsbA E82I in complex with MIPS-0000851 (3-[(2-METHYLBENZYL)SULFANYL]-4H-1,2,4-TRIAZOL-4-AMINE)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(2-methylbenzyl)sulfanyl]-4H-1,2,4-triazol-4-amine, GLYCEROL, ...
Authors:McMahon, R.M, Martin, J.L.
Deposit date:2015-08-24
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.447 Å)
Cite:Fragment library screening identifies hits that bind to the non-catalytic surface of Pseudomonas aeruginosa DsbA1.
PLoS ONE, 12, 2017
6GP2
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BU of 6gp2 by Molmil
Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, DOPA-active form
Descriptor: CALCIUM ION, Ribonucleoside-diphosphate reductase beta chain
Authors:Srinivas, V, Lebrette, H, Lundin, D, Kutin, Y, Sahlin, M, Lerche, M, Enrich, J, Branca, R.M.M, Cox, N, Sjoberg, B.M, Hogbom, M.
Deposit date:2018-06-05
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens.
Nature, 563, 2018
6G2Y
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BU of 6g2y by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
6GA2
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BU of 6ga2 by Molmil
Bacteriorhodopsin, dark state, cell 2
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
Authors:Nass Kovacs, G, Colletier, J.-P, Gruenbein, M.L, Stensitzki, T, Batyuk, A, Carbajo, S, Doak, R.B, Ehrenberg, D, Foucar, L, Gasper, R, Gorel, A, Hilpert, M, Kloos, M, Koglin, J, Reinstein, J, Roome, C.M, Schlesinger, R, Seaberg, M, Shoeman, R.L, Stricker, M, Boutet, S, Haacke, S, Heberle, J, Domratcheva, T, Barends, T.R.M, Schlichting, I.
Deposit date:2018-04-11
Release date:2019-04-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.
Nat Commun, 10, 2019
6G7R
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BU of 6g7r by Molmil
Structure of fully reduced variant E28Q of E. coli hydrogenase-1 at pH 8
Descriptor: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, FE3-S4 CLUSTER, ...
Authors:Carr, S.B, Armstrong, F.A, Evans, R.M.
Deposit date:2018-04-06
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Mechanistic Exploitation of a Self-Repairing, Blocked Proton Transfer Pathway in an O2-Tolerant [NiFe]-Hydrogenase.
J. Am. Chem. Soc., 140, 2018
6T3A
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BU of 6t3a by Molmil
Difference-refined structure of rsEGFP2 10 ns following 400-nm laser irradiation of the off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
6G2Z
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BU of 6g2z by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (3-phenyl-1,2-oxazol-5-yl)methylazanium, (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
6TOS
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BU of 6tos by Molmil
Crystal structure of the Orexin-1 receptor in complex with GSK1059865
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CITRIC ACID, Orexin receptor type 1, ...
Authors:Rappas, M, Ali, A, Bennett, K.A, Brown, J.D, Bucknell, S.J, Congreve, M, Cooke, R.M, Cseke, G, de Graaf, C, Dore, A.S, Errey, J.C, Jazayeri, A, Marshall, F.H, Mason, J.S, Mould, R, Patel, J.C, Tehan, B.G, Weir, M, Christopher, J.A.
Deposit date:2019-12-11
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Comparison of Orexin 1 and Orexin 2 Ligand Binding Modes Using X-ray Crystallography and Computational Analysis.
J.Med.Chem., 63, 2020
6GAN
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BU of 6gan by Molmil
Structure of fully reduced Hydrogenase (Hyd-2) variant E14Q
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, Hydrogenase-2 large chain, ...
Authors:Carr, S.B, Armstrong, F.A, Evans, R.M.
Deposit date:2018-04-11
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanistic Exploitation of a Self-Repairing, Blocked Proton Transfer Pathway in an O2-Tolerant [NiFe]-Hydrogenase.
J. Am. Chem. Soc., 140, 2018

223790

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