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PDB: 2355 results

4ACY
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Selenomethionine derivative of the GH99 endo-alpha-mannosidase from Bacteroides thetaiotaomicron
Descriptor: ENDO-ALPHA-MANNOSIDASE, FORMIC ACID, GLYCEROL
Authors:Thompson, A.J, Williams, R.J, Hakki, Z, Alonzi, D.S, Wennekes, T, Gloster, T.M, Songsrirote, K, Thomas-Oates, J.E, Wrodnigg, T.M, Spreitz, J, Stuetz, A.E, Butters, T.D, Williams, S.J, Davies, G.J.
Deposit date:2011-12-21
Release date:2012-02-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural and Mechanistic Insight Into N-Glycan Processing by Endo-Alpha-Mannosidase.
Proc.Natl.Acad.Sci.USA, 109, 2012
1BF6
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BU of 1bf6 by Molmil
PHOSPHOTRIESTERASE HOMOLOGY PROTEIN FROM ESCHERICHIA COLI
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, PHOSPHOTRIESTERASE HOMOLOGY PROTEIN, ...
Authors:Buchbinder, J.L, Stephenson, R.C, Scanlan, T.S, Fletterick, R.J.
Deposit date:1998-05-27
Release date:1999-06-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical characterization and crystallographic structure of an Escherichia coli protein from the phosphotriesterase gene family.
Biochemistry, 37, 1998
4B14
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Plasmodium vivax N-myristoyltransferase with a bound benzofuran inhibitor (compound 26)
Descriptor: 2-oxopentadecyl-CoA, 3-methoxybenzyl 3-methyl-4-(piperidin-4-yloxy)-1-benzofuran-2-carboxylate, CHLORIDE ION, ...
Authors:Yu, Z, Brannigan, J.A, Moss, D.K, Brzozowski, A.M, Wilkinson, A.J, Holder, A.A, Tate, E.W, Leatherbarrow, R.J.
Deposit date:2012-07-06
Release date:2012-10-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design and Synthesis of Inhibitors of Plasmodium Falciparum N-Myristoyltransferase, a Promising Target for Anti-Malarial Drug Discovery.
J.Med.Chem., 55, 2012
2AZX
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BU of 2azx by Molmil
Charged and uncharged tRNAs adopt distinct conformations when complexed with human tryptophanyl-tRNA synthetase
Descriptor: 72-MER, GLYCEROL, MAGNESIUM ION, ...
Authors:Yang, X.L, Otero, F.J, Ewalt, K.L, Liu, J, Swairjo, M.A, Kohrer, C, RajBhandary, U.L, Skene, R.J, McRee, D.E, Schimmel, P.
Deposit date:2005-09-12
Release date:2006-08-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Two conformations of a crystalline human tRNA synthetase-tRNA complex: implications for protein synthesis.
Embo J., 25, 2006
3ZT9
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BU of 3zt9 by Molmil
The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling
Descriptor: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, SERINE PHOSPHATASE
Authors:Quin, M.B, Berrisford, J.M, Newman, J.A, Basle, A, Lewis, R.J, Marles-Wright, J.
Deposit date:2011-07-06
Release date:2012-02-22
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Bacterial Stressosome: A Modular System that Has Been Adapted to Control Secondary Messenger Signaling.
Structure, 20, 2012
3MUU
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BU of 3muu by Molmil
Crystal structure of the Sindbis virus E2-E1 heterodimer at low pH
Descriptor: Structural polyprotein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
Deposit date:2010-05-03
Release date:2010-11-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
3ZR5
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BU of 3zr5 by Molmil
STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Deane, J.E, Graham, S.C, Kim, N.N, Stein, P.E, Mcnair, R, Cachon-Gonzalez, M.B, Cox, T.M, Read, R.J.
Deposit date:2011-06-14
Release date:2011-09-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights Into Krabbe Disease from Structures of Galactocerebrosidase.
Proc.Natl.Acad.Sci.USA, 108, 2011
4AXI
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BU of 4axi by Molmil
Structure of the Clostridium difficile EutS protein
Descriptor: ETHANOLAMINE CARBOXYSOME STRUCTURAL PROTEIN, GLYCEROL
Authors:Pitts, A.C, Tuck, L.R, Faulds-Pain, A, Lewis, R.J, Marles-Wright, J.
Deposit date:2012-06-13
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Insight Into the Clostridium Difficile Ethanolamine Utilisation Microcompartment.
Plos One, 7, 2012
1AZZ
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BU of 1azz by Molmil
FIDDLER CRAB COLLAGENASE COMPLEXED TO ECOTIN
Descriptor: COLLAGENASE, ECOTIN
Authors:Perona, J.J, Fletterick, R.J.
Deposit date:1997-11-24
Release date:1998-02-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an ecotin-collagenase complex suggests a model for recognition and cleavage of the collagen triple helix.
Biochemistry, 36, 1997
1X7J
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BU of 1x7j by Molmil
CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR BETA COMPLEXED WITH GENISTEIN
Descriptor: Estrogen receptor beta, GENISTEIN, STEROID RECEPTOR COACTIVATOR-1
Authors:Manas, E.S, Xu, Z.B, Unwalla, R.J, Somers, W.S.
Deposit date:2004-08-14
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Understanding the Selectivity of Genistein for Human Estrogen Receptor-Beta Using X-Ray Crystallography and Computational Methods
Structure, 12, 2004
3PZ6
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BU of 3pz6 by Molmil
The crystal structure of GlLeuRS-CP1
Descriptor: Leucyl-tRNA synthetase
Authors:Liu, R.J, Du, D.H, Wang, E.D.
Deposit date:2010-12-14
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Peripheral insertion modulates the editing activity of the isolated CP1 domain of leucyl-tRNA synthetase
Biochem.J., 440, 2011
1X7R
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BU of 1x7r by Molmil
CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR ALPHA COMPLEXED WITH GENISTEIN
Descriptor: Estrogen receptor 1 (alpha), GENISTEIN, steroid receptor coactivator-3
Authors:Manas, E.S, Xu, Z.B, Unwalla, R.J, Somers, W.S.
Deposit date:2004-08-16
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the Selectivity of Genistein for Human Estrogen Receptor-Beta Using X-Ray Crystallography and Computational Methods
Structure, 12, 2004
4KWK
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BU of 4kwk by Molmil
Rat cysteine dioxygenase with cysteine persulfide bound to active site iron
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, S-MERCAPTOCYSTEINE
Authors:Souness, R.J, Wilbanks, S.M, Jameson, G.B, Jameson, G.N.L.
Deposit date:2013-05-24
Release date:2013-10-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanistic implications of persulfenate and persulfide binding in the active site of cysteine dioxygenase.
Biochemistry, 52, 2013
2AJW
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BU of 2ajw by Molmil
Structure of the cyclic conotoxin MII-6
Descriptor: Alpha-conotoxin MII
Authors:Clark, R.J, Fischer, H, Dempster, L, Daly, N.L, Rosengren, K.J, Nevin, S.T, Meunier, F.A, Adams, D.J, Craik, D.J.
Deposit date:2005-08-02
Release date:2005-09-06
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Engineering stable peptide toxins by means of backbone cyclization: Stabilization of the {alpha}-conotoxin MII.
Proc.Natl.Acad.Sci.USA, 102, 2005
2AUG
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BU of 2aug by Molmil
Crystal structure of the Grb14 SH2 domain
Descriptor: Growth factor receptor-bound protein 14
Authors:Depetris, R.S, Hu, J, Gimpelevich, I, Holt, L.J, Daly, R.J, Hubbard, S.R.
Deposit date:2005-08-27
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for inhibition of the insulin receptor by the adaptor protein grb14.
Mol.Cell, 20, 2005
2AJ4
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BU of 2aj4 by Molmil
Crystal structure of Saccharomyces cerevisiae Galactokinase in complex with galactose and Mg:AMPPNP
Descriptor: CHLORIDE ION, Galactokinase, MAGNESIUM ION, ...
Authors:Thoden, J.B, Sellick, C.A, Timson, D.J, Reece, R.J, Holden, H.M.
Deposit date:2005-08-01
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular structure of Saccharomyces cerevisiae Gal1p, a bifunctional galactokinase and transcriptional inducer
J.Biol.Chem., 280, 2005
2B4O
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BU of 2b4o by Molmil
Structure of the R258K mutant of Selenomonas ruminantium PTP-like phytase
Descriptor: CHLORIDE ION, GLYCEROL, myo-inositol hexaphosphate phosphohydrolase
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2005-09-26
Release date:2006-11-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Kinetic and structural analysis of a bacterial protein tyrosine phosphatase-like myo-inositol polyphosphatase.
Protein Sci., 16, 2007
4B21
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BU of 4b21 by Molmil
Unprecedented sculpting of DNA at abasic sites by DNA glycosylase homolog Mag2
Descriptor: 5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP)-3', 5'-D(*GP*CP*TP*AP*CP*3DRP*GP*AP*TP*CP*GP)-3', PHOSPHATE ION, ...
Authors:Dalhus, B, Nilsen, L, Korvald, H, Huffman, J, Forstrom, R.J, McMurray, C.T, Alseth, I, Tainer, J.A, Bjoras, M.
Deposit date:2012-07-12
Release date:2013-01-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Sculpting of DNA at Abasic Sites by DNA Glycosylase Homolog Mag2.
Structure, 21, 2013
1XQM
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BU of 1xqm by Molmil
Variations on the GFP chromophore scaffold: A fragmented 5-membered heterocycle revealed in the 2.1A crystal structure of a non-fluorescent chromoprotein
Descriptor: ACETIC ACID, kindling fluorescent protein
Authors:Wilmann, P.G, Petersen, J, Devenish, R.J, Prescott, M, Rossjohn, J.
Deposit date:2004-10-13
Release date:2004-11-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Variations on the GFP chromophore: A polypeptide fragmentation within the chromophore revealed in the 2.1-A crystal structure of a nonfluorescent chromoprotein from Anemonia sulcata
J.Biol.Chem., 280, 2005
4B22
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BU of 4b22 by Molmil
Unprecedented sculpting of DNA at abasic sites by DNA glycosylase homolog Mag2
Descriptor: 5'-D(*CP*GP*AP*TP*GP*GP*GP*TP*AP*GP*CP)-3', 5'-D(*GP*CP*TP*AP*CP*(3DR)P*CP*AP*TP*CP*GP)-3', MAG2, ...
Authors:Dalhus, B, Nilsen, L, Korvald, H, Huffman, J, Forstrom, R.J, McMurray, C.T, Alseth, I, Tainer, J.A, Bjoras, M.
Deposit date:2012-07-12
Release date:2013-01-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Sculpting of DNA at Abasic Sites by DNA Glycosylase Homolog Mag2.
Structure, 21, 2013
3MUW
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BU of 3muw by Molmil
Pseudo-atomic structure of the E2-E1 protein shell in Sindbis virus
Descriptor: Structural polyprotein
Authors:Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
Deposit date:2010-05-03
Release date:2010-11-24
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
1XZX
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BU of 1xzx by Molmil
Thyroxine-Thyroid Hormone Receptor Interactions
Descriptor: 3,5,3'TRIIODOTHYRONINE, CACODYLATE ION, Thyroid hormone receptor beta-1
Authors:Sandler, B, Webb, P, Apriletti, J.W, Huber, B.R, Togashi, M, Cunha Lima, S.T, Juric, S, Nilsson, S, Wagner, R, Fletterick, R.J, Baxter, J.D.
Deposit date:2004-11-12
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Thyroxine-thyroid hormone receptor interactions.
J.Biol.Chem., 279, 2004
1XU9
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Crystal Structure of the Interface Closed Conformation of 11b-hydroxysteroid dehydrogenase isozyme 1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Corticosteroid 11-beta-dehydrogenase, ...
Authors:Hosfield, D.J, Wu, Y, Skene, R.J, Hilger, M, Jennings, A, Snell, G.P, Aertgeerts, K.
Deposit date:2004-10-25
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Conformational Flexibility in Crystal Structures of Human 11beta-hydroxysteroid dehydrogenase type I provide insights into glucocorticoid interconversion and enzyme regulation.
J.Biol.Chem., 280, 2005
1Y0X
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BU of 1y0x by Molmil
Thyroxine-Thyroid Hormone Receptor Interactions
Descriptor: 3,5,3',5'-TETRAIODO-L-THYRONINE, CACODYLATE ION, Thyroid hormone receptor beta-1
Authors:Sandler, B, Webb, P, Apriletti, J.W, Huber, B.R, Togashi, M, Cunha Lima, S.T, Juric, S, Nilsson, S, Wagner, R, Fletterick, R.J, Baxter, J.D.
Deposit date:2004-11-16
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Thyroxine-thyroid hormone receptor interactions.
J.Biol.Chem., 279, 2004
3PHZ
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BU of 3phz by Molmil
Crystal Structure Analysis of Polyporus squamosus lectin bound to human-type influenza-binding epitope Neu5Aca2-6Galb1-4GlcNAc
Descriptor: N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ricin B-related lectin, ...
Authors:Kadirvelraj, R, Woods, R.J.
Deposit date:2010-11-04
Release date:2011-07-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and binding analysis of Polyporus squamosus lectin in complex with the Neu5Ac{alpha}2-6Gal{beta}1-4GlcNAc human-type influenza receptor.
Glycobiology, 21, 2011

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