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PDB: 2355 results

6BAT
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BU of 6bat by Molmil
Crystal Structure of Wild-Type GltPh in complex with L-aspartate
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Font, J, Scopelliti, A.J, Vandenberg, R.J, Boudker, O, Ryan, R.M.
Deposit date:2017-10-15
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural characterisation reveals insights into substrate recognition by the glutamine transporter ASCT2/SLC1A5.
Nat Commun, 9, 2018
4HFH
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BU of 4hfh by Molmil
The GLIC pentameric Ligand-Gated Ion Channel (wild-type) complexed to bromoform
Descriptor: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
Authors:Sauguet, L, Howard, R.J, Malherbe, L, Lee, U.S, Corringer, P.J, Harris, R.A, Delarue, M.
Deposit date:2012-10-05
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for potentiation by alcohols and anaesthetics in a ligand-gated ion channel.
Nat Commun, 4, 2013
3CL0
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BU of 3cl0 by Molmil
N1 Neuraminidase H274Y + oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, Neuraminidase
Authors:Collins, P, Haire, L.F, Lin, Y.P, Liu, J, Russell, R.J, Walker, P.A, Skehel, J.J, Martin, S.R, Hay, A.J, Gamblin, S.J.
Deposit date:2008-03-18
Release date:2008-05-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants.
Nature, 453, 2008
6BDY
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BU of 6bdy by Molmil
Crystal Structure of the MetH Reactivation Domain bound to Sinefungin
Descriptor: Methionine synthase, SINEFUNGIN
Authors:Fick, R.J, Vander Lee, L.P, Trievel, R.C.
Deposit date:2017-10-24
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.512 Å)
Cite:Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
3CNZ
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BU of 3cnz by Molmil
Structural dynamics of the microtubule binding and regulatory elements in the kinesin-like calmodulin binding protein
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin heavy chain-like protein, MAGNESIUM ION
Authors:Vinogradova, M.V, Malanina, G.G, Reddy, V, Reddy, A.S.N, Fletterick, R.J.
Deposit date:2008-03-26
Release date:2008-06-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural dynamics of the microtubule binding and regulatory elements in the kinesin-like calmodulin binding protein.
J.Struct.Biol., 163, 2008
7R6R
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BU of 7r6r by Molmil
Crystal Structure of a Mycobacteriophage Cluster A2 Immunity Repressor:DNA Complex
Descriptor: DNA (5'-D(P*CP*CP*CP*GP*CP*TP*TP*GP*AP*CP*AP*GP*CP*CP*AP*CP*CP*GP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*CP*GP*GP*TP*GP*GP*CP*TP*GP*TP*CP*AP*AP*GP*CP*GP*GP*G)-3'), Immunity repressor
Authors:McGinnis, R.J, Brambley, C.A, Stamey, B, Green, W.C, Gragg, K.N, Cafferty, E.R, Terwilliger, T.C, Hammel, M, Hollis, T.J, Miller, J.M, Gainey, M.D, Wallen, J.R.
Deposit date:2021-06-23
Release date:2022-07-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence.
Nat Commun, 13, 2022
3DGG
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BU of 3dgg by Molmil
Crystal structure of FabOX108
Descriptor: FabOX108 Heavy Chain Fragment, FabOX108 Light Chain Fragment, MAGNESIUM ION
Authors:Ren, J, Nettleship, J.E, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2008-06-13
Release date:2008-08-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A pipeline for the production of antibody fragments for structural studies using transient expression in HEK 293T cells.
Protein Expr.Purif., 62, 2008
3DV4
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BU of 3dv4 by Molmil
Crystal structure of SAG506-01, tetragonal, crystal 1
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ...
Authors:Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V.
Deposit date:2008-07-18
Release date:2008-12-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments.
Acta Crystallogr.,Sect.D, 64, 2008
3DH9
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BU of 3dh9 by Molmil
Crystal Structure of Drosophila Thioredoxin Reductase, wild-type
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase 1
Authors:Eckenroth, B.E, Hondal, R.J, Everse, S.J.
Deposit date:2008-06-17
Release date:2009-06-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Drosophila Thioredoxin Reductase, wild-type
To be Published
8DSN
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BU of 8dsn by Molmil
Peptidylglycine alpha hydroxylating monoxygenase, Q272A
Descriptor: COPPER (II) ION, GLYCEROL, Peptidylglycine alpha-amidating monooxygenase
Authors:Arias, R.J, Blackburn, N.J.
Deposit date:2022-07-22
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:New structures reveal flexible dynamics between the subdomains of peptidylglycine monooxygenase. Implications for an open to closed mechanism.
Protein Sci., 32, 2023
8DSJ
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BU of 8dsj by Molmil
Peptidylglycine alpha hydroxylating monooxygenase anaerobic
Descriptor: COPPER (II) ION, GLYCEROL, Peptidylglycine alpha-amidating monooxygenase
Authors:Arias, R.J, Blackburn, N.J.
Deposit date:2022-07-22
Release date:2023-03-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:New structures reveal flexible dynamics between the subdomains of peptidylglycine monooxygenase. Implications for an open to closed mechanism.
Protein Sci., 32, 2023
8DSL
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BU of 8dsl by Molmil
Peptidylglycine alpha hydroxylating monooxygenase, Q272E
Descriptor: COPPER (II) ION, GLYCEROL, Peptidylglycine alpha-amidating monooxygenase
Authors:Arias, R.J, Blackburn, N.J.
Deposit date:2022-07-22
Release date:2023-03-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:New structures reveal flexible dynamics between the subdomains of peptidylglycine monooxygenase. Implications for an open to closed mechanism.
Protein Sci., 32, 2023
3D1H
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BU of 3d1h by Molmil
Structure of the PTP-Like Phytase Expressed by Selenomonas Ruminantium at an Ionic Strength of 500 mM
Descriptor: GLYCEROL, Myo-inositol hexaphosphate phosphohydrolase
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2008-05-05
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Effect of ionic strength and oxidation on the P-loop conformation of the protein tyrosine phosphatase-like phytase, PhyAsr.
Febs J., 275, 2008
3D6R
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BU of 3d6r by Molmil
Structure of an avian influenza A virus NS1 protein effector domain
Descriptor: Non-structural protein 1
Authors:Hale, B.G, Barclay, W.S, Randall, R.E, Russell, R.J.
Deposit date:2008-05-20
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structure of an avian influenza A virus NS1 protein effector domain.
Virology, 378, 2008
6BAV
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BU of 6bav by Molmil
Crystal Structure of GltPh R397C in complex with S-Benzyl-L-Cysteine
Descriptor: BENZYLCYSTEINE, Glutamate transporter homolog, SODIUM ION
Authors:Font, J, Scopelliti, A.J, Vandenberg, R.J, Boudker, O, Ryan, R.M.
Deposit date:2017-10-16
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural characterisation reveals insights into substrate recognition by the glutamine transporter ASCT2/SLC1A5.
Nat Commun, 9, 2018
6BM5
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BU of 6bm5 by Molmil
Crystal Structure of the MetH Reactivation Domain bound to AdoMet
Descriptor: Methionine synthase, S-ADENOSYLMETHIONINE
Authors:Fick, R.J, Vander Lee, L.P, Trievel, R.C.
Deposit date:2017-11-13
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
3DIF
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BU of 3dif by Molmil
Crystal structure of FabOX117
Descriptor: FabOX117 Heavy Chain Fragment, FabOX117 Light Chain Fragment
Authors:Nettleship, J.E, Ren, J, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2008-06-20
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A pipeline for the production of antibody fragments for structural studies using transient expression in HEK 293T cells.
Protein Expr.Purif., 62, 2008
6BM6
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BU of 6bm6 by Molmil
Crystal Structure of the MetH Reactivation Domain bound to AdoHcy
Descriptor: Methionine synthase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Fick, R.J, Vander Lee, L.P, Trievel, R.C.
Deposit date:2017-11-13
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
3DUR
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BU of 3dur by Molmil
Crystal structure of SAG173-04
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ...
Authors:Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V.
Deposit date:2008-07-17
Release date:2008-12-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments.
Acta Crystallogr.,Sect.D, 64, 2008
4J09
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BU of 4j09 by Molmil
Crystal Structure of LpxA bound to RJPXD33
Descriptor: 1,2-ETHANEDIOL, Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, DIMETHYL SULFOXIDE, ...
Authors:Jenkins, R.J, Meagher, J.L, Stuckey, J.A, Dotson, G.D.
Deposit date:2013-01-30
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for the Recognition of Peptide RJPXD33 by Acyltransferases in Lipid A Biosynthesis.
J.Biol.Chem., 289, 2014
6BR6
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BU of 6br6 by Molmil
N2 neuraminidase in complex with a novel antiviral compound
Descriptor: (1R)-4-acetamido-3-amino-1,5-anhydro-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Li, L.H, Ve, T, Pascolutti, M, Hadhazi, A, Bailly, B, Thomson, R.J, Gao, G.F, von Itzstein, M.
Deposit date:2017-11-30
Release date:2018-03-07
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.03983879 Å)
Cite:A Sulfonozanamivir Analogue Has Potent Anti-influenza Virus Activity.
ChemMedChem, 13, 2018
6BXA
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BU of 6bxa by Molmil
Crystal structure of N-terminal fragment of Zebrafish Toll-Like Receptor 5 (TLR5) with Lamprey Variable Lymphocyte Receptor 2 (VLR2) bound
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gunn, R.J, Wilson, I.A, Cooper, M.D, Herrin, B.R.
Deposit date:2017-12-18
Release date:2018-05-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:VLR Recognition of TLR5 Expands the Molecular Characterization of Protein Antigen Binding by Non-Ig-based Antibodies.
J. Mol. Biol., 430, 2018
3G3Z
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BU of 3g3z by Molmil
The structure of NMB1585, a MarR family regulator from Neisseria meningitidis
Descriptor: Transcriptional regulator, MarR family
Authors:Nichols, C.E, Sainsbury, S, Ren, J, Walter, T.S, Verma, A, Stammers, D.K, Saunders, N.J, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2009-02-03
Release date:2009-04-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of NMB1585, a MarR-family regulator from Neisseria meningitidis
Acta Crystallogr.,Sect.F, 65, 2009
1VFB
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BU of 1vfb by Molmil
BOUND WATER MOLECULES AND CONFORMATIONAL STABILIZATION HELP MEDIATE AN ANTIGEN-ANTIBODY ASSOCIATION
Descriptor: HEN EGG WHITE LYSOZYME, IGG1-KAPPA D1.3 FV (HEAVY CHAIN), IGG1-KAPPA D1.3 FV (LIGHT CHAIN)
Authors:Bhat, T.N, Poljak, R.J.
Deposit date:1993-12-03
Release date:1994-05-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound water molecules and conformational stabilization help mediate an antigen-antibody association.
Proc.Natl.Acad.Sci.USA, 91, 1994
7S6G
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BU of 7s6g by Molmil
Crystal structure of PhnD from Synechococcus MITS9220 in complex with phosphate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Shah, B.S, Mikolajek, H, Orr, C.M, Mykhaylyk, V, Owens, R.J, Paulsen, I.T.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Marine picocyanobacterial PhnD1 shows specificity for various phosphorus sources but likely represents a constitutive inorganic phosphate transporter.
Isme J, 17, 2023

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