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PDB: 27201 件

3VYW
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Crystal structure of MNMC2 from Aquifex Aeolicus
分子名称: BENZAMIDINE, MNMC2, S-ADENOSYLMETHIONINE
著者Shibata, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2012-10-03
公開日2012-10-17
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Characterization and structure of the Aquifex aeolicus protein DUF752: a bacterial tRNA-methyltransferase (MnmC2) functioning without the usually fused oxidase domain (MnmC1).
J.Biol.Chem., 287, 2012
4EST
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CRYSTAL STRUCTURE OF THE COVALENT COMPLEX FORMED BY A PEPTIDYL ALPHA,ALPHA-DIFLUORO-BETA-KETO AMIDE WITH PORCINE PANCREATIC ELASTASE AT 1.78-ANGSTROMS RESOLUTION
分子名称: CALCIUM ION, ELASTASE, INHIBITOR ACE-ALA-PRO-VAI-DIFLUORO-N-PHENYLETHYLACETAMIDE, ...
著者Takahashi, L.H, Radhakrishnan, R, Rosenfieldjunior, R.E, Meyerjunior, E.F, Trainor, D.A.
登録日1989-05-15
公開日1992-04-15
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Structure of the Covalent Complex Formed by a Peptidyl Alpha,Alpha-Difluoro-Beta-Keto Amide with Porcine Pancreatic Elastase at 1.78-Angstroms Resolution
J.Am.Chem.Soc., 111, 1989
4MD7
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Crystal Structure of full-length symmetric CK2 holoenzyme
分子名称: Casein kinase II subunit alpha, Casein kinase II subunit beta, ZINC ION
著者Lolli, G, Ranchio, A, Battistutta, R.
登録日2013-08-22
公開日2013-11-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Active Form of the Protein Kinase CK2 alpha 2 beta 2 Holoenzyme Is a Strong Complex with Symmetric Architecture.
Acs Chem.Biol., 9, 2014
6ILP
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BU of 6ilp by Molmil
Cryo-EM structure of full Echovirus 6 particle at PH 7.4
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Gao, G.F, Liu, S, Zhao, X, Peng, R.
登録日2018-10-19
公開日2019-05-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Human Neonatal Fc Receptor Is the Cellular Uncoating Receptor for Enterovirus B.
Cell, 177, 2019
7E5R
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SARS-CoV-2 S trimer with three-antibody cocktail complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FC05 heavy chain, FC05 light chain, ...
著者Sun, Y, Wang, L, Wang, N, Feng, R, Wang, X.
登録日2021-02-20
公開日2021-10-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure-based development of three- and four-antibody cocktails against SARS-CoV-2 via multiple mechanisms.
Cell Res., 31, 2021
7EJQ
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Crystal structure of human transthyretin in complex with 8-chloro-9-oxo-9H-xanthene-3-carboxylic acid
分子名称: 8-chloranyl-9-oxidanylidene-xanthene-3-carboxylic acid, CALCIUM ION, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-04-02
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
6IDR
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Crystal structure of Vibrio cholerae MATE transporter VcmN in the bent form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
3W2E
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Crystal structure of oxidation intermediate (20 min) of NADH-cytochrome b5 reductase from pig liver
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
登録日2012-11-28
公開日2013-07-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2Z
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Crystal structure of the cyanobacterial protein
分子名称: IODIDE ION, Methyl-accepting chemotaxis protein, PHYCOCYANOBILIN
著者Narikawa, R, Muraki, N, Shiba, T, Kurisu, G, Ikeuchi, M.
登録日2012-12-06
公開日2013-01-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism
Proc.Natl.Acad.Sci.USA, 110, 2013
6IE8
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RamR in complex with cholic acid
分子名称: CHOLIC ACID, Regulatory protein, SULFATE ION
著者Nakashima, R, Sakurai, K, Yamasaki, S, Nishino, K.
登録日2018-09-13
公開日2019-02-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the multidrug resistance regulator RamR complexed with bile acids.
Sci Rep, 9, 2019
7EJR
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Crystal structure of V30M mutated transthyretin in complex with 8-chloro-9-oxo-9H-xanthene-3-carboxylic acid
分子名称: 8-chloranyl-9-oxidanylidene-xanthene-3-carboxylic acid, CALCIUM ION, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-04-02
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
6ITE
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Crystal structure of group A Streptococcal surface dehydrogenase (SDH)
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
著者Yuan, C, Li, R, Huang, M.D.
登録日2018-11-21
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.739 Å)
主引用文献Structural determination of group A Streptococcal surface dehydrogenase and characterization of its interaction with urokinase-type plasminogen activator receptor.
Biochem.Biophys.Res.Commun., 510, 2019
3W54
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Crystal structure of cyanide-insensitive alternative oxidase from Trypanosoma brucei with colletochlorin B
分子名称: 3-chloro-5-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-4,6-dihydroxy-2-methylbenzaldehyde, Alternative oxidase, mitochondrial, ...
著者Shiba, T, Kido, Y, Sakamoto, K, Inaoka, D.K, Tsuge, C, Tatsumi, R, Takahashi, G, Balogun, E.O, Nara, T, Aoki, T, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Saimoto, H, Moore, A.L, Harada, S, Kita, K.
登録日2013-01-21
公開日2013-03-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the trypanosome cyanide-insensitive alternative oxidase
Proc.Natl.Acad.Sci.USA, 110, 2013
6IW7
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structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
分子名称: (2S)-2-benzamido-4-methyl-pentanoic acid, 4-[(4-fluoro-2-methyl-3H-indol-5-yl)oxy]-6-methoxy-7-[3-(pyrrolidin-1-yl)propoxy]quinazoline, ATP-dependent Clp protease proteolytic subunit 1, ...
著者Bao, R, Luo, Y.F, Zhu, Y.B, Yang, Y, Zhou, Y.Z.
登録日2018-12-04
公開日2020-01-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.692121 Å)
主引用文献structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
To Be Published
4ECC
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Chimeric GST Containing Inserts of Kininogen Peptides
分子名称: chimeric protein between GSHKT10 and domain 5 of kininogen-1
著者Amber, A.B, Sergei, M.M, Yi, P, Rita, R, Xiaoping, Q, Marianne, P.-C, William, C.M, Vivien, Y, Keith, R.M, Anton, A.K.
登録日2012-03-26
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Chimeric glutathione S-transferases containing inserts of kininogen peptides: potential novel protein therapeutics.
J.Biol.Chem., 287, 2012
3W8V
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Crystal Structure Analysis of the synthetic GCN4 coiled coil peptide
分子名称: 1,2-ETHANEDIOL, GCN4n coiled coil peptide, PARA ACETAMIDO BENZOIC ACID
著者Shahar, A, Zarivach, R, Ashkenasy, G.
登録日2013-03-21
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A high-resolution structure that provides insight into coiled-coil thiodepsipeptide dynamic chemistry
Angew.Chem.Int.Ed.Engl., 52, 2013
3W8J
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Crystal structure of P5 a0 in a complex with Prx4 c-term
分子名称: C-terminal peptide from Peroxiredoxin-4, GLYCEROL, POTASSIUM ION, ...
著者Inaba, K, Suzuki, M, Kojima, R.
登録日2013-03-13
公開日2013-09-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Synergistic cooperation of PDI family members in peroxiredoxin 4-driven oxidative protein folding
Sci Rep, 3, 2013
3W9I
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Structural basis for the inhibition of bacterial multidrug exporters
分子名称: DODECYL-BETA-D-MALTOSIDE, Multidrug resistance protein MexB
著者Sakurai, K, Nakashima, R, Hayashi, K, Yamaguchi, A.
登録日2013-04-04
公開日2013-07-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structural basis for the inhibition of bacterial multidrug exporters
Nature, 500, 2013
3W93
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Crystal Structure Analysis of the synthetic GCN4 Ester coiled coil peptide
分子名称: Coiled coil peptide, PARA ACETAMIDO BENZOIC ACID
著者Shahar, A, Zarivach, R, Ashkenasy, G.
登録日2013-03-24
公開日2014-02-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A high-resolution structure that provides insight into coiled-coil thiodepsipeptide dynamic chemistry
Angew.Chem.Int.Ed.Engl., 52, 2013
3W34
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Ternary complex of Thermus thermophilus HB8 uridine-cytidine kinase with substrates
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Uridine kinase
著者Tomoike, F, Nakagawa, N, Masui, R, Kuramitsu, S.
登録日2012-12-10
公開日2013-12-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural and Biochemical Studies on the Reaction Mechanism of Uridine-Cytidine Kinase
Protein J., 34, 2015
7E5S
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SARS-CoV-2 S trimer with four-antibody cocktail complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FC05 heavy chain, FC05 light chain, ...
著者Sun, Y, Wang, L, Wang, N, Feng, R, Wang, X.
登録日2021-02-20
公開日2021-11-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure-based development of three- and four-antibody cocktails against SARS-CoV-2 via multiple mechanisms.
Cell Res., 31, 2021
3W2X
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Crystal structure of DNA uridine endonuclease Mth212
分子名称: Exodeoxyribonuclease, FORMIC ACID, MAGNESIUM ION
著者Tabata, N, Shida, T, Arai, R.
登録日2012-12-06
公開日2013-12-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of DNA uridine endonuclease Mth212
To be Published
6ILN
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Cryo-EM structure of full Echovirus 6 particle at PH 5.5
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Gao, G.F, Liu, S, Zhao, X, Peng, R.
登録日2018-10-19
公開日2019-05-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Human Neonatal Fc Receptor Is the Cellular Uncoating Receptor for Enterovirus B.
Cell, 177, 2019
6IN2
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BU of 6in2 by Molmil
Crystal structure of BRD1 in complex with 18-Crown-6
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, ACETATE ION, Bromodomain-containing protein 1
著者Yokoyama, T, Kosaka, Y, Matsumoto, K, Kitakami, R, Nabeshima, Y, Mizuguchi, M.
登録日2018-10-24
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crown Ethers as Transthyretin Amyloidogenesis Inhibitor
To Be Published
3W91
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crystal structure of SeMet-labeled yeast N-acetyltransferase Mpr1 L87M mutant
分子名称: MPR1 protein
著者Nasuno, R, Hirano, Y, Itoh, T, Hakoshima, T, Hibi, T, Takagi, H.
登録日2013-03-23
公開日2013-07-17
最終更新日2013-08-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional analysis of the yeast N-acetyltransferase Mpr1 involved in oxidative stress tolerance via proline metabolism
Proc.Natl.Acad.Sci.USA, 110, 2013

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件を2024-07-17に公開中

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