Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27201 件

2YNB
DownloadVisualize
BU of 2ynb by Molmil
Crystal structure of the main protease of coronavirus HKU4 in complex with a Michael acceptor SG85
分子名称: 3C-LIKE PROTEINASE, N-[(benzyloxy)carbonyl]-O-tert-butyl-L-seryl-N-{(2R)-5-ethoxy-5-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]pentan-2-yl}-L-phenylalaninamide, NICKEL (II) ION
著者Ma, Q, Xiao, Y, Hilgenfeld, R.
登録日2012-10-13
公開日2013-10-23
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Inhibitor for the Main Protease of Coronavirus Hku4
To be Published
2YW7
DownloadVisualize
BU of 2yw7 by Molmil
Crystal structure of C-terminal deletion mutant of Mycobacterium smegmatis Dps
分子名称: Starvation-induced DNA protecting protein
著者Roy, S, Saraswathi, R, Gupta, S, Sekar, K, Chatterji, D, Vijayan, M.
登録日2007-04-19
公開日2007-07-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Role of N and C-terminal Tails in DNA Binding and Assembly in Dps: Structural Studies of Mycobacterium smegmatis Dps Deletion Mutants
J.Mol.Biol., 370, 2007
7ZAG
DownloadVisualize
BU of 7zag by Molmil
Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R.
登録日2022-03-22
公開日2022-08-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
2YYB
DownloadVisualize
BU of 2yyb by Molmil
Crystal structure of TTHA1606 from Thermus thermophilus HB8
分子名称: Hypothetical protein TTHA1606
著者Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-28
公開日2008-05-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8.
Proteins, 76, 2009
1B4O
DownloadVisualize
BU of 1b4o by Molmil
NMR STUDY OF SSO7D MUTANT (F31A) MINIMIZED AVERAGE STRUCTURE
分子名称: ENDORIBONUCLEASE P2
著者Consonni, R, Santomo, L, Zetta, L.
登録日1998-12-24
公開日2000-01-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A single-point mutation in the extreme heat- and pressure-resistant sso7d protein from sulfolobus solfataricus leads to a major rearrangement of the hydrophobic core.
Biochemistry, 38, 1999
7ZAH
DownloadVisualize
BU of 7zah by Molmil
Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R.
登録日2022-03-22
公開日2022-08-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
2YWH
DownloadVisualize
BU of 2ywh by Molmil
Crystal structure of GDP-bound LepA from Aquifex aeolicus
分子名称: GTP-binding protein LepA, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2008-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal structures of GTP-binding protein LepA from Aquifex aeolicus.
To be Published
7Z20
DownloadVisualize
BU of 7z20 by Molmil
70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Mitropoulou, A, Plessa, E, Wlodarski, T, Ahn, M, Sidhu, H, Becker, T.A, Beckmann, R, Cabrita, L.D, Christodoulou, J.
登録日2022-02-25
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献Modulating co-translational protein folding by rational design and ribosome engineering.
Nat Commun, 13, 2022
2YOA
DownloadVisualize
BU of 2yoa by Molmil
Synaptotagmin-1 C2B domain with phosphoserine
分子名称: CALCIUM ION, PHOSPHOSERINE, SYNAPTOTAGMIN-1, ...
著者Honigmann, A, van den Bogaart, G, Iraheta, E, Risselada, H.J, Milovanovic, D, Mueller, V, Muellar, S, Diederichsen, U, Fasshauer, D, Grubmuller, H, Hell, S.W, Eggeling, C, Kuhnel, K, Jahn, R.
登録日2012-10-22
公開日2013-03-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Phosphatidylinositol 4,5-Bisphosphate Clusters Act as Molecular Beacons for Vesicle Recruitment
Nat.Struct.Mol.Biol., 20, 2013
7YZA
DownloadVisualize
BU of 7yza by Molmil
Crystal structure of the zebrafish FoxH1 bound to the TGTGTATT site
分子名称: DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*GP*TP*AP*TP*TP*GP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*AP*AP*TP*AP*CP*AP*CP*AP*AP*TP*CP*T)-3'), Forkhead box protein H1, ...
著者Pluta, R, Macias, M.J.
登録日2022-02-19
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
2Y6P
DownloadVisualize
BU of 2y6p by Molmil
Evidence for a Two-Metal-Ion-Mechanism in the Kdo- Cytidylyltransferase KdsB
分子名称: 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, BETA-MERCAPTOETHANOL, CYTIDINE-5'-TRIPHOSPHATE, ...
著者Schmidt, H, Mesters, J.R, Mamat, U, Hilgenfeld, R.
登録日2011-01-25
公開日2011-08-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Evidence for a Two-Metal-Ion Mechanism in the Cytidyltransferase Kdsb, an Enzyme Involved in Lipopolysaccharide Biosynthesis.
Plos One, 6, 2011
1BG9
DownloadVisualize
BU of 1bg9 by Molmil
BARLEY ALPHA-AMYLASE WITH SUBSTRATE ANALOGUE ACARBOSE
分子名称: 1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE, 4,6-dideoxy-4-{[(1S,4S,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-beta-D-glucopyranose, ...
著者Kadziola, A, Haser, R.
登録日1998-06-05
公開日1999-06-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular structure of a barley alpha-amylase-inhibitor complex: implications for starch binding and catalysis.
J.Mol.Biol., 278, 1998
1BF8
DownloadVisualize
BU of 1bf8 by Molmil
PERIPLASMIC CHAPERONE FIMC, NMR, 20 STRUCTURES
分子名称: CHAPERONE PROTEIN FIMC
著者Pellecchia, M, Guntert, P, Glockshuber, R, Wuthrich, K.
登録日1998-05-28
公開日1998-11-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR solution structure of the periplasmic chaperone FimC.
Nat.Struct.Biol., 5, 1998
1BIS
DownloadVisualize
BU of 1bis by Molmil
HIV-1 INTEGRASE CORE DOMAIN
分子名称: HIV-1 INTEGRASE
著者Goldgur, Y, Dyda, F, Hickman, A.B, Jenkins, T.M, Craigie, R, Davies, D.R.
登録日1998-06-19
公開日1998-08-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium.
Proc.Natl.Acad.Sci.USA, 95, 1998
1BGX
DownloadVisualize
BU of 1bgx by Molmil
TAQ POLYMERASE IN COMPLEX WITH TP7, AN INHIBITORY FAB
分子名称: TAQ DNA POLYMERASE, TP7 MAB
著者Murali, R, Sharkey, D.J, Daiss, J.L, Krishna Murthy, H.M.
登録日1998-06-02
公開日1998-10-14
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Taq DNA polymerase in complex with an inhibitory Fab: the Fab is directed against an intermediate in the helix-coil dynamics of the enzyme.
Proc.Natl.Acad.Sci.USA, 95, 1998
2QGQ
DownloadVisualize
BU of 2qgq by Molmil
Crystal structure of TM_1862 from Thermotoga maritima. Northeast Structural Genomics Consortium target VR77
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Protein TM_1862
著者Forouhar, F, Neely, H, Hussain, M, Seetharaman, J, Fang, Y, Chen, C.X, Cunningham, K, Conover, K, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2007-06-29
公開日2007-07-17
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Post-translational Modification of Ribosomal Proteins: STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF RimO FROM THERMOTOGA MARITIMA, A RADICAL S-ADENOSYLMETHIONINE METHYLTHIOTRANSFERASE.
J.Biol.Chem., 285, 2010
2QPZ
DownloadVisualize
BU of 2qpz by Molmil
Naphthalene 1,2-dioxygenase Rieske ferredoxin
分子名称: FE2/S2 (INORGANIC) CLUSTER, Naphthalene 1,2-dioxygenase system ferredoxin subunit
著者Brown, E.N, Ramaswamy, S, Karlsson, A, Friemann, R, Parales, J.V, Parales, R, Gibson, D.T.
登録日2007-07-25
公開日2008-09-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Determining Rieske cluster reduction potentials.
J.Biol.Inorg.Chem., 13, 2008
1E1Z
DownloadVisualize
BU of 1e1z by Molmil
Crystal structure of an Arylsulfatase A mutant C69S
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Arylsulfatase A, MAGNESIUM ION
著者von Buelow, R, Schmidt, B, Dierks, T, von Figura, K, Uson, I.
登録日2000-05-12
公開日2001-05-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of an enzyme-substrate complex provides insight into the interaction between human arylsulfatase A and its substrates during catalysis.
J. Mol. Biol., 305, 2001
1DVD
DownloadVisualize
BU of 1dvd by Molmil
SOLUTION NMR STRUCTURE OF HUMAN STEFIN A AT PH 5.5 AND 308K, NMR, 17 STRUCTURES
分子名称: STEFIN A
著者Martin, J.R, Craven, C.J, Jerala, R, Kroon-Zitko, L, Zerovnik, E, Turk, V, Waltho, J.P.
登録日1996-02-26
公開日1996-08-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The three-dimensional solution structure of human stefin A.
J.Mol.Biol., 246, 1995
1DY0
DownloadVisualize
BU of 1dy0 by Molmil
Murine endostatin, crystal form II
分子名称: COLLAGEN ALPHA1(XVIII) CHAIN, ZINC ION
著者Hohenester, E, Sasaki, T, Timpl, R.
登録日2000-01-21
公開日2000-04-11
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Variable Zinc Coordination in Endostatin
J.Mol.Biol., 297, 2000
1D2K
DownloadVisualize
BU of 1d2k by Molmil
C. IMMITIS CHITINASE 1 AT 2.2 ANGSTROMS RESOLUTION
分子名称: CHITINASE 1
著者Hollis, T, Monzingo, A.F, Bortone, K, Ernst, S.R, Cox, R, Robertus, J.D.
登録日1999-09-23
公開日2000-09-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The X-ray structure of a chitinase from the pathogenic fungus Coccidioides immitis.
Protein Sci., 9, 2000
2QED
DownloadVisualize
BU of 2qed by Molmil
Crystal structure of Salmonella thyphimurium LT2 glyoxalase II
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Hydroxyacylglutathione hydrolase
著者Leite, N.R, Campos Bermudez, V.A, Krogh, R, Oliva, G, Soncini, F.C, Vila, A.J.
登録日2007-06-25
公開日2007-10-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Biochemical and Structural Characterization of Salmonella typhimurium Glyoxalase II: New Insights into Metal Ion Selectivity
Biochemistry, 46, 2007
1CI1
DownloadVisualize
BU of 1ci1 by Molmil
CRYSTAL STRUCTURE OF TRIOSEPHOSPHATE ISOMERASE FROM TRYPANOSOMA CRUZI IN HEXANE
分子名称: HEXANE, PROTEIN (TRIOSEPHOSPHATE ISOMERASE)
著者Gao, X.-G, Maldondo, E, Perez-Montfort, R, De Gomez-Puyou, M.T, Gomez-Puyou, A, Rodriguez-Romero, A.
登録日1999-04-06
公開日1999-09-01
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of triosephosphate isomerase from Trypanosoma cruzi in hexane.
Proc.Natl.Acad.Sci.USA, 96, 1999
1CTS
DownloadVisualize
BU of 1cts by Molmil
CRYSTALLOGRAPHIC REFINEMENT AND ATOMIC MODELS OF TWO DIFFERENT FORMS OF CITRATE SYNTHASE AT 2.7 AND 1.7 ANGSTROMS RESOLUTION
分子名称: CITRATE SYNTHASE, CITRIC ACID
著者Remington, S, Wiegand, G, Huber, R.
登録日1984-01-27
公開日1984-07-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystallographic refinement and atomic models of two different forms of citrate synthase at 2.7 and 1.7 A resolution.
J.Mol.Biol., 158, 1982
1E33
DownloadVisualize
BU of 1e33 by Molmil
Crystal structure of an Arylsulfatase A mutant P426L
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Arylsulfatase A, MAGNESIUM ION
著者von Buelow, R, Schmidt, B, Dierks, T, von Figura, K, Uson, I.
登録日2000-06-06
公開日2001-05-25
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Defective oligomerization of arylsulfatase a as a cause of its instability in lysosomes and metachromatic leukodystrophy.
J. Biol. Chem., 277, 2002

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon