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PDB: 27201 件

7NUK
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Crystal structure of SARS CoV2 main protease in complex with EG009 (modelled using PanDDA event map)
分子名称: 2-[2-chloranylethanoyl(propyl)amino]-~{N}-(2-methoxyphenyl)ethanamide, 3C-like proteinase, DIMETHYL SULFOXIDE
著者Oerlemans, R, Eris, D, Wang, M, Sharpe, M, Domling, A, Groves, M.R.
登録日2021-03-12
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Combining High-Throughput Synthesis and High-Throughput Protein Crystallography for Accelerated Hit Identification.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZQG
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Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-C
分子名称: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ...
著者Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R.
登録日2020-07-09
公開日2020-09-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献90 S pre-ribosome transformation into the primordial 40 S subunit.
Science, 369, 2020
6ZXD
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Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1
分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Ameismeier, M, Zemp, I, van den Heuvel, J, Thoms, M, Berninghausen, O, Kutay, U, Beckmann, R.
登録日2020-07-29
公開日2020-12-02
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for the final steps of human 40S ribosome maturation.
Nature, 587, 2020
7OF7
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BU of 7of7 by Molmil
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).
分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
著者Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R.
登録日2021-05-04
公開日2021-06-23
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling.
Nat Commun, 12, 2021
7O9S
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Hantaan virus Gn in complex with Fab nnHTN-Gn2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, Fab nnHTN-Gn2 Heavy chain, ...
著者Rissanen, I, Bowden, T.A, Huiskonen, J.T, Stass, R.
登録日2021-04-16
公開日2021-06-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for a Neutralizing Antibody Response Elicited by a Recombinant Hantaan Virus Gn Immunogen.
Mbio, 12, 2021
7NRH
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Hantaan virus glycoprotein (Gn) in complex with Fab fragment HTN-Gn1.
分子名称: Envelope polyprotein, Fab fragment HTN-Gn1 Heavy chain, Fab fragment HTN-Gn1 Light chain, ...
著者Stass, R, Rissanen, I, Bowden, T.A, Huiskonen, J.T.
登録日2021-03-03
公開日2021-06-23
最終更新日2021-09-15
実験手法ELECTRON MICROSCOPY (19 Å)
主引用文献Structural Basis for a Neutralizing Antibody Response Elicited by a Recombinant Hantaan Virus Gn Immunogen.
Mbio, 12, 2021
6ZQB
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Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state B2
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
著者Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R.
登録日2020-07-09
公開日2020-09-23
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献90 S pre-ribosome transformation into the primordial 40 S subunit.
Science, 369, 2020
6ZWC
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Z-SBTub2 photoswitch bound to tubulin-DARPin D1 complex
分子名称: 2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J.
登録日2020-07-28
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton.
Cell Chem Biol, 28, 2021
6ZXG
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Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1
分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Ameismeier, M, Zemp, I, van den Heuvel, J, Thoms, M, Berninghausen, O, Kutay, U, Beckmann, R.
登録日2020-07-29
公開日2020-12-02
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for the final steps of human 40S ribosome maturation.
Nature, 587, 2020
6ZXH
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BU of 6zxh by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2
分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Ameismeier, M, Zemp, I, van den Heuvel, J, Thoms, M, Berninghausen, O, Kutay, U, Beckmann, R.
登録日2020-07-29
公開日2020-12-16
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis for the final steps of human 40S ribosome maturation.
Nature, 587, 2020
6ZZZ
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BU of 6zzz by Molmil
Crystal structure of yeast Sec62 cytoplasmic domain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
著者Cheng, J, Beckmann, R.
登録日2020-08-05
公開日2020-12-02
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Architecture of the active post-translational Sec translocon.
Embo J., 40, 2021
7A04
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BU of 7a04 by Molmil
Structure of human CKa1 in complex with compound b
分子名称: 1,2-ETHANEDIOL, 1-(phenylmethyl)-4-pyrrolidin-1-yl-pyridin-1-ium, Choline kinase alpha
著者Serran-Aguilera, L, Mariotto, E, Rubbini, G, Castro Navas, F.C, Marco, C, Carrasco-Jimenez, M.P, Ballarotto, M, Macchiarulo, A, Hurtado-Guerrero, R, Viola, G, Lopez-Cara, L.C.
登録日2020-08-06
公開日2020-09-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Synthesis, biological evaluation, in silico modeling and crystallization of novel small monocationic molecules with potent antiproliferative activity by dual mechanism.
Eur.J.Med.Chem., 207, 2020
7A2D
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BU of 7a2d by Molmil
Structure-function analyses of dual-BON domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation to the cell division site
分子名称: Uncharacterized protein YraP
著者Bryant, J.A, Morris, F.C, Knowles, T.J, Maderbocus, R, Heinz, E, Boelter, G, Alodaini, D, Colyer, A, Wotherspoon, P.J, Staunton, K.A, Jeeves, M, Browning, D.F, Sevastsyanovich, Y.R, Wells, T.J, Rossiter, A.E, Bavro, V.N, Sridhar, P, Ward, D.G, Chong, Z.S, Goodall, E.C.A, Icke, C, Teo, A, Chng, S.S, Roper, D.I, Lithgow, T, Cunningham, A.F, Banzhaf, M, Overduin, M, Henderson, I.R.
登録日2020-08-17
公開日2020-12-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of dual BON-domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation.
Elife, 9, 2020
7A5O
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Human MUC2 AAs 21-1397
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Javitt, G, Khmelnitsky, L, Albert, L, Elad, N, Ilani, T, Diskin, R, Fass, D.
登録日2020-08-21
公開日2020-10-21
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Assembly Mechanism of Mucin and von Willebrand Factor Polymers.
Cell, 183, 2020
6S2N
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BU of 6s2n by Molmil
Hen egg-white lysozyme by serial electron diffraction
分子名称: Lysozyme C
著者Buecker, R, Mehrabi, P, Schulz, E.C, Hogan-Lamarre, P.
登録日2019-06-21
公開日2020-04-29
最終更新日2020-11-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.8 Å)
主引用文献Serial protein crystallography in an electron microscope.
Nat Commun, 11, 2020
7P5U
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BU of 7p5u by Molmil
Neuropilin-b1 in a complex with a VEGFB-derived peptide
分子名称: MGC0122, Neuropilin-1
著者Fotinou, C, Rhana, R, Yelland, T.
登録日2021-07-14
公開日2022-07-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Neuropilin-b1 in a complex with a VEGFB-derived peptide
To Be Published
6S2O
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Granulovirus occlusion bodies by serial electron diffraction
分子名称: Granulin
著者Buecker, R, Mehrabi, P, Schulz, E.C, Hogan-Lamarre, P.
登録日2019-06-21
公開日2020-04-29
最終更新日2020-11-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.55 Å)
主引用文献Serial protein crystallography in an electron microscope.
Nat Commun, 11, 2020
7A5F
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BU of 7a5f by Molmil
Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
登録日2020-08-21
公開日2020-12-23
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
7A5H
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Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
登録日2020-08-21
公開日2020-12-23
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
8PFZ
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Pseudomonas aeruginosa FabF C164A mutant in complex with(S)-2-(1H-pyrazole-3-carboxamido)butanoic acid
分子名称: (2~{S})-2-(1~{H}-pyrazol-3-ylcarbonylamino)butanoic acid, 3-oxoacyl-[acyl-carrier-protein] synthase 2, CHLORIDE ION, ...
著者Georgiou, C, Brenk, R, Yadrykhinsky, V, Espeland, L.O.
登録日2023-06-17
公開日2024-01-10
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献New starting points for antibiotics targeting P. aeruginosa FabF discovered by crystallographic fragment screening followed by hit expansion
Chemrxiv, 2023
8PD1
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Pseudomonas aeruginosa FabF C164A mutant in complex with N-isopropyl-1H-imidazole-4-carboxamide
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 2, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Georgiou, C, Brenk, R, Yadrykhinsky, V, Espeland, L.O.
登録日2023-06-11
公開日2024-01-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献New starting points for antibiotics targeting P. aeruginosa FabF discovered by crystallographic fragment screening followed by hit expansion
Chemrxiv, 2023
8OQQ
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Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with Fragment-M-79
分子名称: 2-fluoranyl-5-sulfo-benzoic acid, 3-hydroxyacyl-CoA dehydrogenase, GLYCEROL, ...
著者Dalwani, S, Wierenga, R.K, Venkatesan, R.
登録日2023-04-12
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystallographic fragment binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate channeling path between them
Biorxiv, 2024
8OTL
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structure of InhA from Mycobacterium tuberculosis in complex with 5-(((4-(2-hydroxyphenoxy)benzyl)(octyl)amino)methyl)-2-phenoxyphenol
分子名称: 1,2-ETHANEDIOL, 5-[[octyl-[[4-(2-oxidanylphenoxy)phenyl]methyl]amino]methyl]-2-phenoxy-phenol, ACETATE ION, ...
著者Tamhaev, R, Maveyraud, L, Chebaiki, M, Lherbet, C, Mourey, L.
登録日2023-04-21
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.108 Å)
主引用文献Exploring the plasticity of the InhA substrate-binding site using new diaryl ether inhibitors.
Bioorg.Chem., 143, 2023
8OQV
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Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with Fragment-M-109
分子名称: 3-hydroxyacyl-CoA dehydrogenase, 4-nitrobenzenesulfonic acid, GLYCEROL, ...
著者Dalwani, S, Wierenga, R.K, Venkatesan, R.
登録日2023-04-12
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystallographic fragment binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate channeling path between them
Biorxiv, 2024
8PF8
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Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with Fragment-M-72
分子名称: (2~{R})-3-bis[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]boranyloxypropane-1,2-diol, 3-hydroxyacyl-CoA dehydrogenase, GLYCEROL, ...
著者Dalwani, S, Wierenga, R.K, Venkatesan, R.
登録日2023-06-15
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystallographic fragment binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate channeling path between them
Biorxiv, 2024

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