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PDB: 52 件

3V71
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Crystal structure of PUF-6 in complex with 5BE13 RNA
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Puf (Pumilio/fbf) domain-containing protein 7, confirmed by transcript evidence, ...
著者Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
登録日2011-12-20
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
1KHC
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BU of 1khc by Molmil
Crystal Structure of the PWWP Domain of Mammalian DNA Methyltransferase Dnmt3b
分子名称: DNA cytosine-5 methyltransferase 3B2, UNKNOWN ATOM OR ION
著者Qiu, C, Sawada, K, Zhang, X, Cheng, X.
登録日2001-11-29
公開日2002-02-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The PWWP domain of mammalian DNA methyltransferase Dnmt3b defines a new family of DNA-binding folds.
Nat.Struct.Biol., 9, 2002
3V6Y
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crystal structure of FBF-2 in complex with a mutant gld-1 FBEa13 RNA
分子名称: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*AP*CP*UP*GP*UP*GP*CP*CP*AP*UP*AP*C)-3')
著者Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
登録日2011-12-20
公開日2012-01-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
4DZS
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BU of 4dzs by Molmil
Crystal structure of yeast Puf4p RNA binding domain in complex with HO-4BE mutant RNA
分子名称: 5'-R(*UP*GP*UP*AP*UP*CP*AP*UP*A)-3', Pumilio homology domain family member 4
著者Qiu, C, Hall, T.M.T.
登録日2012-03-01
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site.
Proc.Natl.Acad.Sci.USA, 109, 2012
8SJ7
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Crystal structure of FBF-2 (RBD+CT) in complex with compact FBE RNA
分子名称: Fem-3 mRNA-binding factor 2, RNA (5'-R(*CP*UP*GP*UP*GP*AP*AP*UP*G)-3')
著者Qiu, C, Hall, T.M.T.
登録日2023-04-17
公開日2023-09-27
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Intra- and inter-molecular regulation by intrinsically-disordered regions governs PUF protein RNA binding.
Nat Commun, 14, 2023
6PUN
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Crystal structure of a ternary complex of FBF-2 with LST-1 (site B) and compact FBE RNA
分子名称: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, GLYCEROL, ...
著者Qiu, C, Campbell, Z.T, Hall, T.M.T.
登録日2019-07-18
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献A crystal structure of a collaborative RNA regulatory complex reveals mechanisms to refine target specificity.
Elife, 8, 2019
5SVD
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BU of 5svd by Molmil
Nop9, a new PUF-like protein, prevents premature pre-rRNA cleavage to correctly process mature 18S rRNA
分子名称: Nucleolar protein 9
著者Zhang, J, Qiu, C, Hall, T.
登録日2016-08-05
公開日2016-10-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Nop9 is a PUF-like protein that prevents premature cleavage to correctly process pre-18S rRNA.
Nat Commun, 7, 2016
2ACL
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BU of 2acl by Molmil
Liver X-Receptor alpha Ligand Binding Domain with SB313987
分子名称: 1-BENZYL-3-(4-METHOXYPHENYLAMINO)-4-PHENYLPYRROLE-2,5-DIONE, Oxysterols receptor LXR-alpha, RETINOIC ACID, ...
著者Jaye, M.C, Krawiec, J.A, Campobasso, N, Smallwood, A, Qiu, C, Lu, Q, Kerrigan, J.J.
登録日2005-07-19
公開日2005-09-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of substituted maleimides as liver x receptor agonists and determination of a ligand-bound crystal structure.
J.Med.Chem., 48, 2005
1NGN
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BU of 1ngn by Molmil
Mismatch repair in methylated DNA. Structure of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4
分子名称: methyl-CpG binding protein MBD4
著者Wu, P, Qiu, C, Sohail, A, Zhang, X, Bhagwat, A.S, Cheng, X.
登録日2002-12-17
公開日2003-03-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mismatch repair in methylated DNA. Structure and activity of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4
J.Biol.Chem., 278, 2003
6NOF
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BU of 6nof by Molmil
Crystal structure of FBF-2 repeat 5 mutant (C363A, R364Y, Q367S) in complex with 8-nt RNA
分子名称: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')
著者McCann, K.L, Wang, Y, Qiu, C, Hall, T.M.T.
登録日2019-01-16
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
6NOH
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BU of 6noh by Molmil
Crystal structure of FBF-2 repeat 5 mutant (C363S, R364Y, Q367S) in complex with 8-nt RNA
分子名称: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')
著者McCann, K.L, Wang, Y, Qiu, C, Hall, T.M.T.
登録日2019-01-16
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
6BZK
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BU of 6bzk by Molmil
Solution structure of KTI55
分子名称: M protein
著者Castellino, F.J, Qiu, C, Yuan, Y.
登録日2017-12-24
公開日2019-01-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Contributions of different modules of the plasminogen-binding Streptococcus pyogenes M-protein that mediate its functional dimerization.
J.Struct.Biol., 204, 2018
6NOC
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BU of 6noc by Molmil
Crystal structure of FBF-2 repeat 5 mutant (C363A, R364Y) in complex with 8-nt RNA
分子名称: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')
著者McCann, K, Wang, Y, Qiu, C, Hall, T.M.T.
登録日2019-01-16
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.849 Å)
主引用文献Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
6WPI
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BU of 6wpi by Molmil
Crystal structure of Nop9 in complex with ITS1 RNA
分子名称: 3,3',3''-phosphanetriyltripropanoic acid, GLYCEROL, Nucleolar protein 9, ...
著者Zhang, J, Qiu, C, Hall, T.M.T.
登録日2020-04-27
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Nop9 recognizes structured and single-stranded RNA elements of preribosomal RNA.
Rna, 26, 2020
8ZR5
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BU of 8zr5 by Molmil
Cryo-EM Structure of GPR119-Gs-Firuglipel complex
分子名称: 4-[5-[(1~{R})-1-(4-cyclopropylcarbonylphenoxy)propyl]-1,2,4-oxadiazol-3-yl]-2-fluoranyl-~{N}-[(2~{R})-1-oxidanylpropan-2-yl]benzamide, Glucose-dependent insulinotropic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Wong, T.S, Zeng, Z.C, Xiong, T.T, Gan, S.Y, Qiu, C, Du, Y.
登録日2024-06-04
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Cryo-EM structure of GPR119-Gs complex
To Be Published
8ZRK
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Cryo-EM structure of GPR119-Gs Complex with small molecule agonist GSK-1292263
分子名称: 5-[4-[[6-(4-methylsulfonylphenyl)pyridin-3-yl]oxymethyl]piperidin-1-yl]-3-propan-2-yl-1,2,4-oxadiazole, Glucose-dependent insulinotropic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Wong, T.S, Xiong, T.T, Zeng, Z.C, Gan, S.Y, Qiu, C, Du, Y.
登録日2024-06-04
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Cryo-EM structure of GPR119-Gs complex
To be published
6NOD
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BU of 6nod by Molmil
Crystal structure of C. elegans PUF-8 in complex with RNA
分子名称: PUF (Pumilio/FBF) domain-containing, RNA (5'-R(P*UP*GP*UP*AP*UP*AP*UP*A)-3')
著者Wang, Y, McCann, K.L, Qiu, C, Hall, T.M.T.
登録日2019-01-16
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.547 Å)
主引用文献Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
3QGC
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BU of 3qgc by Molmil
Crystal structure of FBF-2 R288Y mutant in complex with gld-1 FBEa A7U mutant
分子名称: 5'-R(*UP*GP*UP*GP*CP*CP*UP*UP*A)-3', Fem-3 mRNA-binding factor 2
著者Wang, Y, Qiu, C, Koh, Y.Y, Opperman, L, Gross, L, Hall, T.M.T, Wickens, M.
登録日2011-01-24
公開日2011-03-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Stacking interactions in PUF-RNA complexes.
Rna, 17, 2011
3QG9
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BU of 3qg9 by Molmil
crystal structure of FBF-2/gld-1 FBEa A7U mutant complex
分子名称: 1,2-ETHANEDIOL, 5'-R(*UP*GP*UP*GP*CP*CP*UP*UP*A)-3', Fem-3 mRNA-binding factor 2
著者Koh, Y.Y, Wang, Y, Qiu, C, Opperman, L, Gross, L, Hall, T.M.T, Wickens, M.
登録日2011-01-24
公開日2011-03-23
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Stacking interactions in PUF-RNA complexes.
Rna, 17, 2011
3REF
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BU of 3ref by Molmil
Crystal structure of EhRho1 bound to GDP and Magnesium
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho-like small GTPase, ...
著者Bosch, D.E, Qiu, C, Siderovski, D.P.
登録日2011-04-04
公開日2011-09-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Unique structural and nucleotide exchange features of the Rho1 GTPase of Entamoeba histolytica.
J.Biol.Chem., 286, 2011
3REG
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BU of 3reg by Molmil
Crystal structure of EhRho1 bound to a GTP analog and Magnesium
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Rho-like small GTPase
著者Bosch, D.E, Qiu, C, Siderovski, D.P.
登録日2011-04-04
公開日2011-09-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Unique structural and nucleotide exchange features of the Rho1 GTPase of Entamoeba histolytica.
J.Biol.Chem., 286, 2011
3QGB
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BU of 3qgb by Molmil
Crystal structure of FBF-2 R288Y mutant in complex with gld-1 FBEa
分子名称: 5'-R(*UP*GP*UP*GP*CP*CP*AP*UP*A)-3', Fem-3 mRNA-binding factor 2
著者Wang, Y, Qiu, C, Koh, Y.Y, Opperman, L, Gross, L, Hall, T.M.T, Wickens, M.
登録日2011-01-24
公開日2011-03-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Stacking interactions in PUF-RNA complexes.
Rna, 17, 2011
3V74
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BU of 3v74 by Molmil
crystal structure of FBF-2 in complex with gld-1 FBEa13 RNA
分子名称: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*CP*AP*UP*GP*UP*GP*CP*CP*AP*UP*AP*C)-3')
著者Wang, Y, Qiu, C, Kershner, A, Holley, C.P, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
登録日2011-12-20
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
2YJY
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A specific and modular binding code for cytosine recognition in PUF domains
分子名称: 5'-R(*AP*UP*UP*GP*CP*AP*UP*AP*UP*AP)-3', PUMILIO HOMOLOG 1
著者Dong, S, Wang, Y, Cassidy-Amstutz, C, Lu, G, Qiu, C, Bigler, R, Jezyk, M, Li, C, Hall, T.M.T, Wang, Z.
登録日2011-05-24
公開日2011-06-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Specific and Modular Binding Code for Cytosine Recognition in Pumilio/Fbf (Puf) RNA-Binding Domains.
J.Biol.Chem., 286, 2011
8R23
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INTS9-INTS11-BRAT1 complex
分子名称: BRCA1-associated ATM activator 1, Integrator complex subunit 11, Integrator complex subunit 9, ...
著者Sabath, K, Qiu, C, Jonas, S.
登録日2023-11-02
公開日2024-07-31
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Assembly mechanism of Integrator's RNA cleavage module.
Mol.Cell, 84, 2024

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件を2024-10-30に公開中

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