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PDB: 136 件
1IHM
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CRYSTAL STRUCTURE ANALYSIS OF NORWALK VIRUS CAPSID
分子名称: capsid protein
著者Prasad, B.V, Hardy, M.E, Dokland, T, Bella, J, Rossmann, M.G, Estes, M.K.
登録日2001-04-19
公開日2001-05-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献X-ray crystallographic structure of the Norwalk virus capsid
Science, 286, 1999
6NIR
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Crystal structure of a GII.4 norovirus HOV protease
分子名称: HOV protease, HOV protease fragment
著者Prasad, B.V.V, Hu, L.
登録日2018-12-31
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献GII.4 Norovirus Protease Shows pH-Sensitive Proteolysis with a Unique Arg-His Pairing in the Catalytic Site.
J. Virol., 93, 2019
8TL8
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Structure of Orthoreovirus RNA Chaperone SigmaNS R6A mutant in complex with bile acid
分子名称: GLYCOCHOLIC ACID, Protein sigma-NS
著者Prasad, B.V.V, Zhao, B, Hu, L, Neetu, N.
登録日2023-07-26
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
8TL1
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Structure of Orthoreovirus RNA Chaperone SigmaNS N17
分子名称: GLYCOCHOLIC ACID, Protein sigma-NS
著者Prasad, B.V.V, Zhao, B, Hu, L.
登録日2023-07-26
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
8TKA
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Structure of Orthoreovirus RNA Chaperone SigmaNS R6A mutant
分子名称: Protein sigma-NS
著者Prasad, B.V.V, Zhao, B, Hu, L.
登録日2023-07-25
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
4IN1
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Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
分子名称: 3C-like protease, SULFATE ION
著者Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
登録日2013-01-03
公開日2013-02-20
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013
4IMQ
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Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
分子名称: 3C-like protease, PEPTIDE INHIBITOR, syc8, ...
著者Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
登録日2013-01-03
公開日2013-02-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013
4IN2
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Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
分子名称: C-like protease
著者Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
登録日2013-01-03
公開日2013-02-20
最終更新日2013-04-10
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013
4INH
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Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
分子名称: DIMETHYL SULFOXIDE, Genome polyprotein, peptide inhibitor, ...
著者Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
登録日2013-01-04
公開日2013-02-20
最終更新日2013-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013
1UH7
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Crystal structure of rhizopuspepsin at pH 4.6
分子名称: hizopuspepsin I
著者Prasad, B.V.L.S, Suguna, K.
登録日2003-06-26
公開日2004-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Effect of pH on the structure of rhizopuspepsin.
Acta Crystallogr.,Sect.D, 59, 2003
1UH9
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Crystal structure of rhizopuspepsin at pH 7.0
分子名称: hizopuspepsin I
著者Prasad, B.V.L.S, Suguna, K.
登録日2003-06-26
公開日2004-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Effect of pH on the structure of rhizopuspepsin.
Acta Crystallogr.,Sect.D, 59, 2003
1UH8
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Crystal structure of rhizopuspepsin at pH 8.0
分子名称: hizopuspepsin I
著者Prasad, B.V.L.S, Suguna, K.
登録日2003-06-26
公開日2004-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Effect of pH on the structure of rhizopuspepsin.
Acta Crystallogr.,Sect.D, 59, 2003
4IMZ
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Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
分子名称: Genome polyprotein, SODIUM ION, THIOCYANATE ION, ...
著者Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
登録日2013-01-03
公開日2013-02-20
最終更新日2013-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013
7RSW
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Crystal structure of group B human rotavirus VP8*
分子名称: Outer capsid protein VP4, peptide
著者Hu, L, Salmen, W, Sankaran, B, Prasad, B.V.
登録日2021-08-11
公開日2022-07-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Novel fold of rotavirus glycan-binding domain predicted by AlphaFold2 and determined by X-ray crystallography.
Commun Biol, 5, 2022
5VX5
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VP8* of a G2P[4] Human Rotavirus in complex with LNFP1
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.285 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
1L9V
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Non Structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssRNA binding and nucleic acid helix-destabilizing protein
分子名称: Rotavirus-NSP2
著者Jayaram, H, Taraporewala, Z, Patton, J.T, Prasad, B.V.
登録日2002-03-26
公開日2002-06-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Rotavirus protein involved in genome replication and packaging exhibits a HIT-like fold.
Nature, 417, 2002
5VX9
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VP8* of P[6] Human Rotavirus RV3 in complex with LNFP1
分子名称: Outer capsid protein VP4, SULFATE ION, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.822 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX4
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VP8* of a G2P[4] Human Rotavirus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX8
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VP8* of P[6] Human Rotavirus RV3
分子名称: Outer capsid protein VP4, SULFATE ION
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
6PCU
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VP8* of a G2P[4] human rotavirus in complex with scFv antibody 9
分子名称: GLYCEROL, Outer capsid protein VP4, SULFATE ION, ...
著者Hu, L, Venkataram Prasad, B.V.
登録日2019-06-18
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human VP8* mAbs neutralize rotavirus selectively in human intestinal epithelial cells.
J.Clin.Invest., 130, 2019
2GE8
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Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
分子名称: Nucleocapsid protein
著者Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
登録日2006-03-18
公開日2006-06-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2FYR
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Crystal Structure of Norwalk Virus Protease grown in the presence of AEBSF
分子名称: CHLORIDE ION, Chymotrypsin-like cysteine proteinase, MAGNESIUM ION
著者Zeitler, C.E, Estes, M.K, Venkataram Prasad, B.V.
登録日2006-02-08
公開日2006-07-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray crystallographic structure of the Norwalk virus protease at 1.5-A resolution.
J.Virol., 80, 2006
2GX9
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X-ray structure of influenza virus NS1 effector domain
分子名称: NS1 Effector Domain, THIOCYANATE ION
著者Bornholdt, Z.A, Prasad, B.V.
登録日2006-05-08
公開日2006-05-30
最終更新日2020-09-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray structure of influenza virus NS1 effector domain.
Nat.Struct.Mol.Biol., 13, 2006
2GE7
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Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
分子名称: Nucleocapsid protein
著者Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
登録日2006-03-18
公開日2006-06-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2FYQ
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Crystal Structure of the Norwalk Virus Protease
分子名称: CHLORIDE ION, Chymotrypsin-like cysteine proteinase, PHOSPHATE ION
著者Zeitler, C.E, Estes, M.K, Venkataram Prasad, B.V.
登録日2006-02-08
公開日2006-07-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray crystallographic structure of the Norwalk virus protease at 1.5-A resolution.
J.Virol., 80, 2006

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