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PDB: 101 件

4N3D
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Crystal structure of the dimeric variant EGFP-K162Q in P61 space group
分子名称: GLYCEROL, Green fluorescent protein, PHOSPHATE ION, ...
著者Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
登録日2013-10-07
公開日2014-08-27
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Three dimensional structure of the dimeric gene-engineered variant of green fluorescent protein egfp-K162Q in P61 crystal space group
Rus.J.Bioorg.Chem., 40, 2014
3LVD
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Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
分子名称: GLYCEROL, Green fluorescent protein
著者Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
登録日2010-02-19
公開日2010-03-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
4HVF
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Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)
分子名称: GLYCEROL, Green fluorescent protein blFP-Y6
著者Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日2012-11-06
公開日2013-09-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
6ZQO
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EYFP mutant - F165G
分子名称: G protein/GFP fusion protein, SULFATE ION
著者Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V.
登録日2020-07-10
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Amino acid residue at the 165th position tunes EYFP chromophore maturation. A structure-based design.
Comput Struct Biotechnol J, 19, 2021
7BHG
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Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A
分子名称: Fluorescent protein FP480
著者Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V.
登録日2021-01-11
公開日2022-03-02
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A
To Be Published
4Q7T
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Crystal structure of photoswitchable fluorescent protein PSmOrange
分子名称: PSmOrange
著者Malashkevich, V.N, Pletnev, S, Almo, S.C.
登録日2014-04-25
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014
4Q7U
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Crystal structure of photoswitchable fluorescent protein PSmOrange2
分子名称: GLYCEROL, PSmOrange2
著者Malashkevich, V.N, Pletnev, S, Almo, S.C.
登録日2014-04-25
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014
3F2L
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Crystal structure analysis of the K171A mutation of N-terminal type II cohesin 1 from the cellulosomal ScaB subunit of Acetivibrio cellulolyticus
分子名称: 1,2-ETHANEDIOL, AMMONIUM ION, Cellulosomal scaffoldin adaptor protein B, ...
著者Frolow, F, Freeman, A, Wine, Y, Eppel, A, Shanzer, M, Stempler, S.
登録日2008-10-30
公開日2008-12-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure analysis of the K171A mutation of N-terminal type II cohesin 1 from the cellulosomal ScaB subunit of Acetivibrio cellulolyticus
To be Published
2FL1
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Crystal structure of red fluorescent protein from Zoanthus, zRFP574, at 2.4A resolution
分子名称: Red fluorescent protein zoanRFP, SULFATE ION
著者Pletnev, V, Pletneva, N, Martynov, V, Tikhonova, T, Popov, B, Pletnev, S.
登録日2006-01-05
公開日2007-01-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of a red fluorescent protein from Zoanthus, zRFP574, reveals a novel chromophore
Acta Crystallogr.,Sect.D, 62, 2006
5YCZ
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Crystal structure of Alocasin, protease inhibitor from Giant Taro (Arum macrorrhizon)
分子名称: Trypsin/chymotrypsin inhibitor
著者Vajravijayan, S, Pletnev, S, Nandhagopal, N, Gunasekaran, K.
登録日2017-09-08
公開日2018-06-13
最終更新日2018-11-28
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Crystal structure of a novel Kunitz type inhibitor, alocasin with anti-Aedes aegypti activity targeting midgut proteases.
Pest Manag. Sci., 74, 2018
6H0I
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Solution structure of Melampsora larici-populina MlpP4.1
分子名称: Secreted protein
著者Tsan, P, Petre, B, Hecker, A, Rouhier, N, Duplessis, S.
登録日2018-07-09
公開日2018-08-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural genomics applied to the rust fungus Melampsora larici-populina reveals two candidate effector proteins adopting cystine knot and NTF2-like protein folds.
Sci Rep, 9, 2019
4ORN
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BU of 4orn by Molmil
Blue Fluorescent Protein mKalama1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, SULFATE ION, ...
著者Vegh, R.B, Bloch, D.A, Bommarius, A.S, Verkhovsky, M, Pletnev, S, Iwai, H, Bochenkova, A.V, Solntsev, K.M.
登録日2014-02-11
公開日2015-02-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Hidden photoinduced reactivity of the blue fluorescent protein mKalama1.
Phys Chem Chem Phys, 17, 2015
8EEV
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Venezuelan equine encephalitis virus-like particle in complex with Fab SKT-20
分子名称: Coat protein, Fab SKT20 heavy chain, Fab SKT20 light chain
著者Tsybovsky, Y, Pletnev, S, Verardi, R, Roederer, M, Kwong, P.D.
登録日2022-09-07
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8EEU
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Venezuelan equine encephalitis virus-like particle in complex with Fab SKT05
分子名称: Coat protein, Fab SKT05 heavy chain, Fab SKT05 light chain
著者Tsybovsky, Y, Pletnev, S, Verardi, R, Roederer, M, Kwong, P.D.
登録日2022-09-07
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
2OGR
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BU of 2ogr by Molmil
Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution
分子名称: FLUORESCENT PROTEIN FP538
著者Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
登録日2007-01-08
公開日2007-09-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom
Bioorg.Khim., 33
2OJK
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Crystal Structure of Green Fluorescent Protein from Zoanthus sp at 2.2 A Resolution
分子名称: GFP-like fluorescent chromoprotein FP506
著者Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
登録日2007-01-12
公開日2007-09-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
6KBQ
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Crystal Structure of Lectin from Pleurotus ostreatus in complex with Glycerol
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
著者Vajravijayan, S, Pletnev, S, Luo, Z, Gunasekaran, K, Nandhagopal, N.
登録日2019-06-26
公開日2020-08-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献Crystallographic and calorimetric analysis on Pleurotus ostreatus lectin and its sugar complexes - promiscuous binding driven by geometry.
Int.J.Biol.Macromol., 152, 2020
6KBJ
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Structure of Lectin from Pleurotus ostreatus in complex with malonate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lectin, ...
著者Vajravijayan, S, Pletnev, S, Luo, Z, Gunasekaran, K, Nandhagopal, N.
登録日2019-06-25
公開日2020-08-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystallographic and calorimetric analysis on Pleurotus ostreatus lectin and its sugar complexes - promiscuous binding driven by geometry.
Int.J.Biol.Macromol., 152, 2020
6KC2
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Crystal Structure of Lectin from Pleurotus ostreatus in complex with Rhamnose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lectin, ...
著者Gunasekaran, K, Pletnev, S, Luo, Z, Vajravijayan, S, Nandhagopal, N.
登録日2019-06-26
公開日2020-08-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.246 Å)
主引用文献Crystallographic and calorimetric analysis on Pleurotus ostreatus lectin and its sugar complexes - promiscuous binding driven by geometry.
Int.J.Biol.Macromol., 152, 2020
1N6G
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The structure of immature Dengue-2 prM particles
分子名称: major envelope protein E
著者Zhang, Y, Corver, J, Chipman, P.R, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
登録日2002-11-10
公開日2003-06-03
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Structures of Immature flavivirus particles
EMBO J., 22, 2003
1NA4
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The structure of immature Yellow Fever virus particle
分子名称: major envelope protein E
著者Zhang, Y, Corver, J, Chipman, P.R, Lenches, E, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
登録日2002-11-26
公開日2003-12-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY
主引用文献Structures of immature flavivirus particles
EMBO J., 22, 2003
7SX3
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Human NALCN-FAM155A-UNC79-UNC80 channelosome with CaM bound, conformation 1/2
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kschonsak, M, Chua, H.C, Weidling, C, Chakouri, N, Noland, C.L, Schott, K, Chang, T, Tam, C, Patel, N, Arthur, C.P, Leitner, A, Ben-Johny, M, Ciferri, C, Pless, S.A, Payandeh, J.
登録日2021-11-22
公開日2021-12-29
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural architecture of the human NALCN channelosome.
Nature, 603, 2022
7SX4
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Human NALCN-FAM155A-UNC79-UNC80 channelosome with CaM bound, conformation 2/2
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kschonsak, M, Chua, H.C, Weidling, C, Chakouri, N, Noland, C.L, Schott, K, Chang, T, Tam, C, Patel, N, Arthur, C.P, Leitner, A, Ben-Johny, M, Ciferri, C, Pless, S.A, Payandeh, J.
登録日2021-11-22
公開日2021-12-29
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural architecture of the human NALCN channelosome.
Nature, 603, 2022
1S5I
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Fab (LNKB-2) of monoclonal antibody to Human Interleukin-2, crystal structure
分子名称: Fab-fragment of monoclonal antibody
著者Pletnev, V.Z, Goryacheva, E.A, Tsygannik, I.N, Nesmeyanov, V.A, Pletnev, S.V, Pangborn, W, Duax, W.
登録日2004-01-21
公開日2004-05-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献[A new crystal form of the Fab fragment of a monoclonal antibody to human interleukin-2: the three-dimensional structure at 2.7 A resolution].
Bioorg. Khim., 30
1K4R
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Structure of Dengue Virus
分子名称: MAJOR ENVELOPE PROTEIN E
著者Kuhn, R.J, Zhang, W, Rossmann, M.G, Pletnev, S.V, Corver, J, Lenches, E, Jones, C.T, Mukhopadhyay, S, Chipman, P.R, Strauss, E.G, Baker, T.S, Strauss, J.H.
登録日2001-10-08
公開日2002-03-13
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (24 Å)
主引用文献Structure of dengue virus: implications for flavivirus organization, maturation, and fusion.
Cell(Cambridge,Mass.), 108, 2002

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