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PDB: 55 件
8V2K
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Proteus vulgaris tryptophan indole-lyase complexed with L-alanine
分子名称: (2E)-2-{[(Z)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4(1H)-YLIDENE}METHYL]IMINO}PROPANOIC ACID, (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine, DIMETHYL SULFOXIDE, ...
著者Phillips, R.S.
登録日2023-11-22
公開日2023-12-06
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Proteus vulgaris tryptophan indole-lyase complexed with L-alanine
To Be Published
8V4A
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Proteus vulgaris tryptophan indole-lyase complexed with L-ethionine
分子名称: (2E)-4-(ethylsulfanyl)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}butanoic acid, (E)-S-ethyl-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-homocysteine, DIMETHYL SULFOXIDE, ...
著者Phillips, R.S.
登録日2023-11-28
公開日2023-12-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Proteus vulgaris tryptophan indole-lyase complexed with L-ethionine
To Be Published
8V9P
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Proteus vulgaris tryptophan indole-lyase complexed with (3S)-dioxindolyl-L-alanine
分子名称: (2~{E})-2-[(~{Z})-[2-methyl-3-oxidanyl-5-[[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxymethyl]-1~{H}-pyridin-4-ylidene]methyl]imino-3-[(3~{S})-3-oxidanyl-2-oxidanylidene-1~{H}-indol-3-yl]propanoic acid, DIMETHYL SULFOXIDE, POTASSIUM ION, ...
著者Phillips, R.S.
登録日2023-12-08
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Proteus vulgaris tryptophan indole-lyase complexed with L-ethionine
To Be Published
8V6P
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Proteus vulgaris tryptophan indole-lyase complexed with 7-aza-L-tryptophan
分子名称: (2E)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-3-(1H-pyrrolo[2,3-b]pyridin-3-yl)propanoic acid, (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-3-(1H-pyrrolo[2,3-b]pyridin-3-yl)-L-alanine, DIMETHYL SULFOXIDE, ...
著者Phillips, R.S.
登録日2023-12-02
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Proteus vulgaris tryptophan indole-lyase complexed with L-alanine
To Be Published
8D4I
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BU of 8d4i by Molmil
Structure of Y430F D-ornithine/D-lysine decarboxylase complex with putrescine
分子名称: 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-06-02
公開日2022-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
8D5R
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Structure of Y430F D-ornithine/D-lysine decarboxylase complex with D-ornithine
分子名称: 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ACETATE ION, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-06-06
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
7TCS
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BU of 7tcs by Molmil
M379A mutant tyrosine phenol-lyase complexed with L-methionine
分子名称: (4Z)-4-({[(1E)-1-carboxy-3-(methylsulfanyl)propylidene]azaniumyl}methylidene)-2-methyl-5-[(phosphonooxy)methyl]-1,4-dihydropyridin-3-olate, CESIUM ION, DIMETHYL SULFOXIDE, ...
著者Phillips, R.S.
登録日2021-12-28
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献M379A Mutant Tyrosine Phenol-lyase from Citrobacter freundii Has Altered Conformational Dynamics.
Chembiochem, 23, 2022
7TDL
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BU of 7tdl by Molmil
M379A mutant tyrosine phenol-lyase complexed with 3-bromo-DL-phenylalanine
分子名称: (4Z)-4-({[(1E)-2-(3-bromophenyl)-1-carboxyethylidene]azaniumyl}methylidene)-2-methyl-5-[(phosphonooxy)methyl]-1,4-dihydropyridin-3-olate, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Phillips, R.S.
登録日2022-01-01
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献M379A Mutant Tyrosine Phenol-lyase from Citrobacter freundii Has Altered Conformational Dynamics.
Chembiochem, 23, 2022
8D88
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Structure of Y430F D-ornithine/D-lysine decarboxylase complex with D-lysine
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, D-ornithine/D-lysine decarboxylase, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-06-08
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
6N2H
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BU of 6n2h by Molmil
Structure of D-ornithine/D-lysine decarboxylase from Salmonella typhimurium
分子名称: 1,4-DIETHYLENE DIOXIDE, D-ornithine/D-lysine decarboxylase, DIMETHYL SULFOXIDE
著者Phillips, R.S, Hoover, T.R.
登録日2018-11-13
公開日2019-10-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal Structure of d-Ornithine/d-Lysine Decarboxylase, a Stereoinverting Decarboxylase: Implications for Substrate Specificity and Stereospecificity of Fold III Decarboxylases.
Biochemistry, 58, 2019
8D2Y
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BU of 8d2y by Molmil
Y430F mutant of D-ornithine/D-lysine decarboxylase
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-05-31
公開日2022-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
8D5D
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BU of 8d5d by Molmil
Structure of Y430F D-ornithine/D-lysine decarboxylase complex with D-arginine
分子名称: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-D-arginine, D-ornithine/D-lysine decarboxylase, DIMETHYL SULFOXIDE, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-06-04
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
6MO3
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BU of 6mo3 by Molmil
Citrobacter freundii tyrosine phenol-lyase complexed with 4-hydroxypyridine and aminoacrylate from L-serine
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, POTASSIUM ION, ...
著者Phillips, R.S.
登録日2018-10-04
公開日2019-10-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Pressure and Temperature Effects on the Formation of Aminoacrylate Intermediates of Tyrosine Phenol-lyase Demonstrate Reaction Dynamics
Acs Catalysis, 10, 2020
6MLS
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BU of 6mls by Molmil
Citrobacter freundii tyrosine phenol-lyase complexed with 4-hydroxypyridine and aminoacrylate from L-tyrosine
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, POTASSIUM ION, ...
著者Phillips, R.S.
登録日2018-09-27
公開日2019-10-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Pressure and Temperature Effects on the Formation of Aminoacrylate Intermediates of Tyrosine Phenol-lyase Demonstrate Reaction Dynamics
Acs Catalysis, 10, 2020
6MPD
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BU of 6mpd by Molmil
Citrobacter freundii tyrosine phenol-lyase complexed with 4-hydroxypyridine and aminoacrylate from 3-F-L-tyrosine
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 3-FLUOROTYROSINE, ...
著者Phillips, R.S.
登録日2018-10-05
公開日2019-10-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Pressure and Temperature Effects on the Formation of Aminoacrylate Intermediates of Tyrosine Phenol-lyase Demonstrate Reaction Dynamics
Acs Catalysis, 10, 2020
6MME
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BU of 6mme by Molmil
Citrobacter freundii tyrosine phenol-lyase complexed with 4-hydroxypyridine and aminoacrylate from S-ethyl-L-cysteine
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, POTASSIUM ION, ...
著者Phillips, R.S.
登録日2018-09-30
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure and Temperature Effects on the Formation of Aminoacrylate Intermediates of Tyrosine Phenol-lyase Demonstrate Reaction Dynamics
Acs Catalysis, 10, 2020
6MQQ
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BU of 6mqq by Molmil
Citrobacter freundii F448A mutant tyrosine phenol-lyase complexed with 4-hydroxypyridine and aminoacrylate from S-ethyl-L-cysteine
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, POTASSIUM ION, ...
著者Phillips, R.S.
登録日2018-10-10
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Pressure and Temperature Effects on the Formation of Aminoacrylate Intermediates of Tyrosine Phenol-lyase Demonstrate Reaction Dynamics
Acs Catalysis, 10, 2020
6NV8
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BU of 6nv8 by Molmil
Perdeuterated tyrosine phenol-lyase from Citrobacter freundii complexed with an aminoacrylate intermediate formed from S-ethyl-L-cysteine and 4-hydroxypyridine
分子名称: 2-AMINO-ACRYLIC ACID, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
著者Phillips, R.S.
登録日2019-02-04
公開日2020-02-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Pressure and Temperature Effects on the Formation of Aminoacrylate Intermediates of Tyrosine Phenol-lyase Demonstrate Reaction Dynamics
Acs Catalysis, 10, 2020
6XRH
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Salmonella typhimurium tryptophan synthase complexed with oxindolyl-L-alanine and D-glycerol-3-phosphate
分子名称: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]-L-alanine, 4-[(E)-({1-carboxy-2-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]ethan-1-id-1-yl}iminio)methyl]-2-methyl-5-[(phosphonooxy)methyl]pyridin-1-ium-3-olate, DIMETHYL SULFOXIDE, ...
著者Phillips, R.S.
登録日2020-07-12
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural Basis of the Stereochemistry of Inhibition of Tryptophan Synthase by Tryptophan and Derivatives.
Biochemistry, 60, 2021
6XT0
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Salmonella typhimurium tryptophan synthase complexed with dioxindolyl-L-alanine and D-glycerol-3-phosphate
分子名称: 4-[(E)-({1-carboxy-2-[(3R)-3-hydroxy-2-oxo-2,3-dihydro-1H-indol-3-yl]ethan-1-id-1-yl}iminio)methyl]-2-methyl-5-[(phosphonooxy)methyl]pyridin-1-ium-3-olate, DIMETHYL SULFOXIDE, SN-GLYCEROL-1-PHOSPHATE, ...
著者Phillips, R.S.
登録日2020-07-16
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structural Basis of the Stereochemistry of Inhibition of Tryptophan Synthase by Tryptophan and Derivatives.
Biochemistry, 60, 2021
7UX4
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Crystallographic snapshots of ternary complexes of thermophilic secondary alcohol dehydrogenase from Thermoanaerobacter pseudoethanolicus reveal the dynamics of ligand exchange and the proton relay network.
分子名称: (1S,3S)-3-methylcyclohexan-1-ol, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Phillips, R.S, Dinh, T.
登録日2022-05-04
公開日2022-05-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystallographic snapshots of ternary complexes of thermophilic secondary alcohol dehydrogenase from Thermoanaerobacter pseudoethanolicus reveal the dynamics of ligand exchange and the proton relay network.
Proteins, 90, 2022
6XNC
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BU of 6xnc by Molmil
Salmonella typhimurium tryptophan synthase complexed with L-tryptophan and D-glycerol-3-phosphate
分子名称: DIMETHYL SULFOXIDE, PYRIDOXAL-5'-PHOSPHATE, SN-GLYCEROL-1-PHOSPHATE, ...
著者Phillips, R.S.
登録日2020-07-02
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural Basis of the Stereochemistry of Inhibition of Tryptophan Synthase by Tryptophan and Derivatives.
Biochemistry, 60, 2021
6XOY
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Salmonella typhimurium tryptophan synthase complexed with D-tryptophan and D-glycerol-3-phosphate
分子名称: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-D-tryptophan, DIMETHYL SULFOXIDE, SN-GLYCEROL-1-PHOSPHATE, ...
著者Phillips, R.S.
登録日2020-07-07
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural Basis of the Stereochemistry of Inhibition of Tryptophan Synthase by Tryptophan and Derivatives.
Biochemistry, 60, 2021
6DVX
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Citrobacter freundii tyrosine phenol-lyase F448A mutant complexed with L-phenylalanine
分子名称: (2E)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-3-phenylpropanoic acid, (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-phenylalanine, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
著者Phillips, R.S.
登録日2018-06-25
公開日2018-10-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal Structures of Wild-Type and F448A Mutant Citrobacter freundii Tyrosine Phenol-Lyase Complexed with a Substrate and Inhibitors: Implications for the Reaction Mechanism.
Biochemistry, 57, 2018
6DUR
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Citrobacter freundii tyrosine phenol-lyase complexed with L-phenylalanine
分子名称: (2E)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-3-phenylpropanoic acid, (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-phenylalanine, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
著者Phillips, R.S.
登録日2018-06-21
公開日2018-10-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of Wild-Type and F448A Mutant Citrobacter freundii Tyrosine Phenol-Lyase Complexed with a Substrate and Inhibitors: Implications for the Reaction Mechanism.
Biochemistry, 57, 2018

 

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