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PDB: 25 件
2GBL
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Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Williams, D.R, Pattanayek, S, Xu, Y, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
登録日2006-03-10
公開日2007-01-23
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods.
Embo J., 25, 2006
2QKE
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Wild Type Crystal Structure of Full Length Circadian Clock Protein KaiB from Thermosynechococcus elongatus BP-1
分子名称: Circadian clock protein kaiB
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2007-07-10
公開日2008-06-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation.
Embo J., 27, 2008
3DVL
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Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M.
登録日2008-07-18
公開日2009-07-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
To be Published
3JZM
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Crystal structure of the phosphorylation-site mutant T432A of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2009-09-23
公開日2010-03-31
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0C
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Crystal structure of the phosphorylation-site double mutant S431A/T432E of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2009-09-24
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0A
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Crystal structure of the phosphorylation-site mutant S431A of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2009-09-24
公開日2010-03-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0E
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Crystal structure of the phosphorylation-site mutant T426N of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2009-09-24
公開日2010-03-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K09
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Crystal structure of the phosphorylation-site mutant S431D of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2009-09-24
公開日2010-03-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0F
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Crystal structure of the phosphorylation-site double mutant T426A/T432A of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M, Pattanayek, S.
登録日2009-09-24
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
5C5E
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Structure of KaiA dimer in complex with C-terminal KaiC peptide at 2.8 A resolution
分子名称: 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-5-[(sulfanylcarbonyl)amino]benzoic acid, Circadian clock protein KaiA, KaiC C-terminal peptide
著者Pattanayek, R, Egli, M.
登録日2015-06-19
公開日2015-08-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Protein-Protein Interactions in the Cyanobacterial Circadian Clock: Structure of KaiA Dimer in Complex with C-Terminal KaiC Peptides at 2.8 angstrom Resolution.
Biochemistry, 54, 2015
1BHJ
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CRYSTAL STRUCTURE OF APO-GLYCINE N-METHYLTRANSFERASE (GNMT)
分子名称: GLYCINE N-METHYLTRANSFERASE
著者Pattanayek, R, Newcomer, M.E, Wagner, C.
登録日1998-06-09
公開日1999-01-06
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of apo-glycine N-methyltransferase (GNMT).
Protein Sci., 7, 1998
4O0M
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Crystal structure of T. Elongatus BP-1 Clock Protein KaiC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
著者Pattanayek, R, Egli, M.
登録日2013-12-13
公開日2014-05-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献An arginine tetrad as mediator of input-dependent and input-independent ATPases in the clock protein KaiC
Acta Crystallogr.,Sect.D, D70, 2014
3S1A
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Crystal structure of the phosphorylation-site double mutant S431E/T432E of the KaiC circadian clock protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Williams, D.W, Rossi, G, Weigand, S, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
登録日2011-05-14
公開日2011-09-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Combined SAXS/EM Based Models of the S. elongatus Post-Translational Circadian Oscillator and its Interactions with the Output His-Kinase SasA.
Plos One, 6, 2011
1TF7
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BU of 1tf7 by Molmil
Crystal Structure of Circadian Clock Protein KaiC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, KaiC
著者Pattanayek, R, Wang, J, Mori, T, Xu, Y, Johnson, C.H, Egli, M.
登録日2004-05-26
公開日2004-08-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Visualizing a Circadian Clock Protein; Crystal Structure of KaiC and Functional Insights
Mol.Cell, 15, 2004
4G86
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Crystal structure of the redox-active cofactor DBMIB bound to the full length circadian clock protein KaiA from Synechococcus elongatus
分子名称: 2,5-DIBROMO-3-ISOPROPYL-6-METHYLBENZO-1,4-QUINONE, Circadian clock protein kaiA, GLYCEROL, ...
著者Pattanayek, R, Egli, M.
登録日2012-07-21
公開日2012-10-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.387 Å)
主引用文献Crystal Structure of the Redox-Active Cofactor Dibromothymoquinone Bound to Circadian Clock Protein KaiA and Structural Basis for Dibromothymoquinone's Ability to Prevent Stimulation of KaiC Phosphorylation by KaiA.
Biochemistry, 51, 2012
4KSO
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Crystal Structure of Circadian clock protein KaiB from S.Elongatus
分子名称: Circadian clock protein KaiB
著者Pattanayek, R, Egli, M.
登録日2013-05-17
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.622 Å)
主引用文献CryoEM and Molecular Dynamics of the Circadian KaiB-KaiC Complex Indicates KaiB Monomers Interact with KaiC and Block ATP Binding Clefts.
J.Mol.Biol., 425, 2013
1XUW
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Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogs
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*(NMT)P*AP*CP*GP*C)-3')
著者Pattanayek, R, Sethaphong, L, Pan, C, Prhavc, M, Prakash, T.P, Manoharan, M, Egli, M.
登録日2004-10-26
公開日2004-12-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogues.
J.Am.Chem.Soc., 126, 2004
1XUX
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Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogs
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*(NMS)P*AP*CP*GP*C)-3')
著者Pattanayek, R, Sethaphong, L, Pan, C, Prhavc, M, Prakash, T.P, Manoharan, M, Egli, M.
登録日2004-10-26
公開日2004-12-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogues.
J.Am.Chem.Soc., 126, 2004
1U9I
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Crystal Structure of Circadian Clock Protein KaiC with Phosphorylation Sites
分子名称: ADENOSINE-5'-TRIPHOSPHATE, KaiC, MAGNESIUM ION
著者Xu, Y, Mori, T, Pattanayek, R, Pattanayek, S, Egli, M, Johnson, C.H.
登録日2004-08-09
公開日2005-04-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses
PROC.NATL.ACAD.SCI.USA, 101, 2004
6M7H
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BU of 6m7h by Molmil
Structure of calmodulin with KN93
分子名称: CALCIUM ION, Calmodulin-1, N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide
著者Damo, S.M, Pattanayek, R, Johnson, C.N.
登録日2018-08-20
公開日2019-08-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The CaMKII inhibitor KN93-calmodulin interaction and implications for calmodulin tuning of NaV1.5 and RyR2 function.
Cell Calcium, 82, 2019
2TMV
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VISUALIZATION OF PROTEIN-NUCLEIC ACID INTERACTIONS IN A VIRUS. REFINED STRUCTURE OF INTACT TOBACCO MOSAIC VIRUS AT 2.9 ANGSTROMS RESOLUTION BY X-RAY FIBER DIFFRACTION
分子名称: CALCIUM ION, RNA (5'-R(P*GP*AP*A)-3'), TMV COAT PROTEIN
著者Stubbs, G, Pattanayek, R, Namba, K.
登録日1988-09-15
公開日1989-01-09
最終更新日2024-02-21
実験手法FIBER DIFFRACTION (2.9 Å)
主引用文献Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction.
J.Mol.Biol., 208, 1989
4DUG
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BU of 4dug by Molmil
Crystal Structure of Circadian Clock Protein KaiC E318A Mutant
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION, ...
著者Egli, M, Mori, T, Pattanayek, R, Xu, Y, Qin, X, Johnson, C.H.
登録日2012-02-21
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.292 Å)
主引用文献Dephosphorylation of the Core Clock Protein KaiC in the Cyanobacterial KaiABC Circadian Oscillator Proceeds via an ATP Synthase Mechanism.
Biochemistry, 51, 2012
4IJM
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Crystal structure of circadian clock protein KaiC A422V mutant
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION, ...
著者Egli, M, Pattanayek, R.
登録日2012-12-21
公開日2013-02-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.352 Å)
主引用文献Loop-Loop Interactions Regulate KaiA-Stimulated KaiC Phosphorylation in the Cyanobacterial KaiABC Circadian Clock.
Biochemistry, 52, 2013
1VRO
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Selenium-Assisted Nucleic Acid Crystallography: Use of Phosphoroselenoates for MAD Phasing of a DNA Structure
分子名称: 5'-D(*CP*(GMS)P*CP*GP*CP*G)-3', MAGNESIUM ION, SPERMINE
著者Wilds, C.J, Pattanayek, R, Pan, C, Wawrzak, Z, Egli, M.
登録日2005-04-14
公開日2005-04-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Selenium-Assisted Nucleic Acid Crystallography: Use of Phosphoroselenoates for MAD Phasing of a DNA Structure
J.Am.Chem.Soc., 124, 2002
1VTM
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STRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTION
分子名称: Coat protein, RNA (5'-R(P*GP*AP*A)-3')
著者Stubbs, G, Pattanayek, R.
登録日1992-03-30
公開日1994-07-31
最終更新日2024-02-14
実験手法FIBER DIFFRACTION (3.5 Å)
主引用文献Structure of the U2 strain of tobacco mosaic virus refined at 3.5 A resolution using X-ray fiber diffraction.
J.Mol.Biol., 228, 1992

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件を2024-11-06に公開中

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