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PDB: 497 件

4NEE
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BU of 4nee by Molmil
crystal structure of AP-2 alpha/simga2 complex bound to HIV-1 Nef
分子名称: AP-2 complex subunit alpha-2, AP-2 complex subunit sigma, Protein Nef
著者Hurley, J.H, Bonifacino, J.S, Ren, X, Park, S.Y.
登録日2013-10-29
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8841 Å)
主引用文献How HIV-1 Nef hijacks the AP-2 clathrin adaptor to downregulate CD4.
Elife, 3, 2014
4OGD
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BU of 4ogd by Molmil
Crystal structure of succinic semialdehyde dehydrogenase from Streptococcus pyogenes in complex with NADP+ as the cofactor
分子名称: Succinate-semialdehyde dehydrogenase
著者Jang, E.H, Park, S.A, Chi, Y.M, Lee, K.S.
登録日2014-01-15
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Kinetic and Structural Characterization for Cofactor Preference of Succinic Semialdehyde Dehydrogenase from Streptococcus pyogenes.
Mol.Cells, 37, 2014
1Y7H
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BU of 1y7h by Molmil
Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
分子名称: THIOCYANATE ION, salicylic acid-binding protein 2
著者Forouhar, F, Yang, Y, Kumar, D, Chen, Y, Fridman, E, Park, S.W, Chiang, Y, Acton, T.B, Montelione, G.T, Pichersky, E, Klessig, D.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2004-12-08
公開日2004-12-28
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.Usa, 102, 2005
7XZ3
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BU of 7xz3 by Molmil
Crystal structure of the Type I-B CRISPR-associated protein, Csh2 from Thermobaculum terrenum
分子名称: CRISPR-associated protein, Csh2 family
著者Seo, P.W, Gu, D.H, Park, S.Y, Kim, J.S.
登録日2022-06-02
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.889 Å)
主引用文献Structural characterization of the type I-B CRISPR Cas7 from Thermobaculum terrenum.
Biochim Biophys Acta Proteins Proteom, 1871, 2023
2NC5
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BU of 2nc5 by Molmil
Solution Structure of N-Xylosylated Pin1 WW Domain
分子名称: Pin1 WW Domain, beta-D-xylopyranose
著者Hsu, C, Park, S, Mortenson, D.E, Foley, B, Wang, X, Woods, R.J, Case, D.A, Powers, E.T, Wong, C, Dyson, H, Kelly, J.W.
登録日2016-03-20
公開日2016-06-08
最終更新日2020-07-29
実験手法SOLUTION NMR
主引用文献The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.
J.Am.Chem.Soc., 138, 2016
4N7P
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BU of 4n7p by Molmil
Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of half-liganded human haemoglobin without phosphate at 2.8 A resolution.
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Sugiyama, K, Shibayama, N, Park, S.Y.
登録日2013-10-16
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.809 Å)
主引用文献Capturing the hemoglobin allosteric transition in a single crystal form
J.Am.Chem.Soc., 136, 2014
4N7O
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BU of 4n7o by Molmil
Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of half-liganded human haemoglobin with phosphate at 2.5 A resolution.
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Sugiyama, K, Shibayama, N, Park, S.Y.
登録日2013-10-16
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Capturing the hemoglobin allosteric transition in a single crystal form
J.Am.Chem.Soc., 136, 2014
4N7N
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Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of full-liganded human haemoglobin with phosphate at 2.75 A resolution.
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Sugiyama, K, Shibayama, N, Park, S.Y.
登録日2013-10-16
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.754 Å)
主引用文献Capturing the hemoglobin allosteric transition in a single crystal form
J.Am.Chem.Soc., 136, 2014
7FG6
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BU of 7fg6 by Molmil
Crystal structure of the Tyrosyl-tRNA synthetase (TyrRS) in Nanoarchaeum equitans
分子名称: Tyrosine--tRNA ligase
著者Noguchi, H, Kamata, K, Park, S.Y, Tamura, K.
登録日2021-07-26
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Nanoarchaeum equitans tyrosyl-tRNA synthetase and its aminoacylation activity toward tRNA Tyr with an extra guanosine residue at the 5'-terminus.
Biochem.Biophys.Res.Commun., 575, 2021
5Z5E
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BU of 5z5e by Molmil
Crystal structure of the Glycyl-tRNA synthetase (GlyRS) in Nanoarchaeum equitans
分子名称: GLYCEROL, NEQ417, SULFATE ION
著者Noguchi, H, Park, S.Y, Tamura, K.
登録日2018-01-18
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.098 Å)
主引用文献Glycyl-tRNA synthetase from Nanoarchaeum equitans: The first crystal structure of archaeal GlyRS and analysis of its tRNA glycylation.
Biochem.Biophys.Res.Commun., 511, 2019
2NC4
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BU of 2nc4 by Molmil
Solution Structure of N-Galactosylated Pin1 WW Domain
分子名称: Pin1 WW Domain, beta-D-galactopyranose
著者Hsu, C, Park, S, Mortenson, D.E, Foley, B, Wang, X, Woods, R.J, Case, D.A, Powers, E.T, Wong, C, Dyson, H, Kelly, J.W.
登録日2016-03-20
公開日2016-06-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.
J.Am.Chem.Soc., 138, 2016
2NC6
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BU of 2nc6 by Molmil
Solution Structure of N-L-idosylated Pin1 WW Domain
分子名称: Pin1 WW Domain, beta-L-idopyranose
著者Hsu, C, Park, S, Mortenson, D.E, Foley, B, Wang, X, Woods, R.J, Case, D.A, Powers, E.T, Wong, C, Dyson, H, Kelly, J.W.
登録日2016-03-20
公開日2016-06-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.
J.Am.Chem.Soc., 138, 2016
2NC3
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BU of 2nc3 by Molmil
Solution Structure of N-Allosylated Pin1 WW Domain
分子名称: Pin1 WW Domain, beta-D-allopyranose
著者Hsu, C, Park, S, Mortenson, D.E, Foley, B, Wang, X, Woods, R.J, Case, D.A, Powers, E.T, Wong, C, Dyson, H, Kelly, J.W.
登録日2016-03-20
公開日2016-06-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.
J.Am.Chem.Soc., 138, 2016
6LF1
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BU of 6lf1 by Molmil
SeviL, a GM1b/asialo-GM1 binding lectin
分子名称: CHLORIDE ION, SeviL
著者Kamata, K, Ozeki, Y, Park, S.-Y, Tame, J.R.H.
登録日2019-11-28
公開日2020-12-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata.
Sci Rep, 10, 2020
6LF2
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BU of 6lf2 by Molmil
SeviL bound to asialo-GM1 saccharide
分子名称: SeviL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Kamata, K, Ozeki, Y, Park, S.-Y, Tame, J.R.H.
登録日2019-11-28
公開日2020-12-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata.
Sci Rep, 10, 2020
6JV6
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BU of 6jv6 by Molmil
Crystal structure of the sirohydrochlorin chelatase SirB from Bacillus subtilis subspecies spizizenii in complex with cobalt
分子名称: COBALT (II) ION, Sirohydrochlorin ferrochelatase
著者Nam, M.S, Song, W.S, Park, S.C, Yoon, S.I.
登録日2019-04-16
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Cobalt complex structure of the sirohydrochlorin chelatase SirB from Bacillus subtilis subsp. spizizenii.
KOREAN J MICROBIOL., 55, 2019
1VAT
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BU of 1vat by Molmil
Iodine derivative of hen egg-white lysozyme
分子名称: IODIDE ION, Lysozyme C
著者Takeda, K, Miyatake, H, Park, S.Y, Kawamoto, M, Kamiya, N, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-19
公開日2005-03-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Multi-wavelength anomalous diffraction method for I and Xe atoms using ultra-high-energy X-rays from SPring-8
J.Appl.Crystallogr., 37, 2004
1VAU
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BU of 1vau by Molmil
Xenon derivative of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
著者Takeda, K, Miyatake, H, Park, S.Y, Kawamoto, M, Kamiya, N, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-19
公開日2005-03-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Multi-wavelength anomalous diffraction method for I and Xe atoms using ultra-high-energy X-rays from SPring-8
J.Appl.Crystallogr., 37, 2004
7VDN
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BU of 7vdn by Molmil
High resolution crystal structure of Sperm Whale Myoglobin in the carbonmonoxy form
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Shibayama, N, Sato-Tomita, A, Ishimoto, N, Park, S.Y.
登録日2021-09-07
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献X-ray fluorescence holography of biological metal sites: Application to myoglobin.
Biochem.Biophys.Res.Commun., 635, 2022
1L2Z
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BU of 1l2z by Molmil
CD2BP2-GYF domain in complex with proline-rich CD2 tail segment peptide
分子名称: CD2 ANTIGEN (CYTOPLASMIC TAIL)-BINDING PROTEIN 2, T-CELL SURFACE ANTIGEN CD2
著者Freund, C, Kuhne, R, Yang, H, Park, S, Reinherz, E.L, Wagner, G.
登録日2002-02-26
公開日2002-11-20
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Dynamic interaction of CD2 with the GYF and the SH3 domain of compartmentalized effector molecules
Embo J., 21, 2002
5H34
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BU of 5h34 by Molmil
Crystal structure of the C-terminal domain of methionyl-tRNA synthetase (MetRS-C) in Nanoarchaeum equitans
分子名称: Methionine-tRNA ligase
著者Suzuki, H, Kaneko, A, Yamamoto, T, Nambo, M, Umehara, T, Yoshida, H, Park, S.Y, Tamura, K.
登録日2016-10-20
公開日2017-06-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.748 Å)
主引用文献Binding Properties of Split tRNA to the C-terminal Domain of Methionyl-tRNA Synthetase of Nanoarchaeum equitans.
J. Mol. Evol., 84, 2017
7XCB
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BU of 7xcb by Molmil
Crystal structure of the mouse interleukin-9
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-9
著者Kim, J.W, Lee, J.-O, Park, S.M.
登録日2022-03-23
公開日2023-03-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of the mouse interleukin-9
To Be Published
1Y7I
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BU of 1y7i by Molmil
Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
分子名称: 2-HYDROXYBENZOIC ACID, salicylic acid-binding protein 2
著者Forouhar, F, Yang, Y, Kumar, D, Chen, Y, Fridman, E, Park, S.W, Chiang, Y, Acton, T.B, Montelione, G.T, Pichersky, E, Klessig, D.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2004-12-08
公開日2004-12-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.USA, 102, 2005
1YG0
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BU of 1yg0 by Molmil
Solution structure of apo-CopP from Helicobacter pylori
分子名称: COP associated protein
著者Lee, B.J, Park, S.J.
登録日2005-01-04
公開日2006-01-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of apo-CopP from Helicobacter pylori
To be published
6JYI
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BU of 6jyi by Molmil
Crystal structure of the PadR-like transcriptional regulator BC1756 from Bacillus cereus
分子名称: Transcriptional repressor PadR
著者Kim, T.H, Park, S.C, Lee, K.C, Song, W.S, Yoon, S.I.
登録日2019-04-26
公開日2019-06-26
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural and DNA-binding studies of the PadR-like transcriptional regulator BC1756 from Bacillus cereus.
Biochem.Biophys.Res.Commun., 515, 2019

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