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PDB: 136 results

1J6S
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BU of 1j6s by Molmil
Crystal Structure of an RNA Tetraplex (UGAGGU)4 with A-tetrads, G-tetrads, U-tetrads and G-U octads
Descriptor: 5'-R(*(BRUP*GP*AP*GP*GP*U)-3', BARIUM ION, SODIUM ION
Authors:Pan, B, Xiong, Y, Shi, K, Deng, J, Sundaralingam, M.
Deposit date:2002-07-10
Release date:2003-08-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of an RNA purine-rich tetraplex containing adenine tetrads: implications for specific binding in RNA tetraplexes
Structure, 11, 2003
3OVA
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How the CCA-adding Enzyme Selects Adenine over Cytosine in Position 76 of tRNA
Descriptor: 1,2-ETHANEDIOL, CCA-adding enzyme, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ...
Authors:Pan, B.C, Xiong, Y, Steitz, T.A.
Deposit date:2010-09-16
Release date:2010-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:How the CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA.
Science, 330, 2010
3OUY
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BU of 3ouy by Molmil
How the CCA-adding Enzyme Selects Adenine Over Cytosine at Position 76 of tRNA
Descriptor: 1,2-ETHANEDIOL, CCA-Adding Enzyme, PYROPHOSPHATE 2-, ...
Authors:Pan, B.C, Xiong, Y, Steitz, T.A.
Deposit date:2010-09-15
Release date:2010-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:How the CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA.
Science, 330, 2010
1GHT
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BU of 1ght by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF GAMMA DELTA RESOLVASE
Descriptor: TRANSPOSON GAMMA-DELTA RESOLVASE
Authors:Pan, B, Mullen, G.P.
Deposit date:2001-01-11
Release date:2001-08-01
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the catalytic domain of gammadelta resolvase. Implications for the mechanism of catalysis.
J.Mol.Biol., 310, 2001
1HX7
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BU of 1hx7 by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF GAMMA DELTA RESOLVASE
Descriptor: TRANSPOSON GAMMA-DELTA RESOLVASE
Authors:Pan, B, Mullen, G.P.
Deposit date:2001-01-11
Release date:2002-01-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the catalytic domain of gammadelta resolvase. Implications for the mechanism of catalysis.
J.Mol.Biol., 310, 2001
3OVS
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BU of 3ovs by Molmil
How the CCA-adding Enzyme Selects Adenine over Cytosine in Position 76 of tRNA
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CCA-Adding Enzyme, ...
Authors:Pan, B.C, Xiong, Y, Steitz, T.A.
Deposit date:2010-09-17
Release date:2010-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:How the CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA.
Science, 330, 2010
3OVB
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BU of 3ovb by Molmil
How the CCA-adding Enzyme Selects Adenine over Cytosine in Position 76 of tRNA
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CCA-Adding Enzyme, ...
Authors:Pan, B.C, Xiong, Y, Steitz, T.A.
Deposit date:2010-09-16
Release date:2010-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:How the CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA.
Science, 330, 2010
3OV7
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BU of 3ov7 by Molmil
How the CCA-Adding Enzyme Selects Adenine over Cytosine in Position 76 of tRNA
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CCA-Adding Enzyme, ...
Authors:Pan, B.C, Xiong, Y, Steitz, T.A.
Deposit date:2010-09-15
Release date:2010-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:How the CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA.
Science, 330, 2010
2GRB
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BU of 2grb by Molmil
Crystal Structure of an RNA Quadruplex Containing Inosine-tetrad
Descriptor: 5'-R(*(U33)P*GP*IP*GP*GP*U)-3', POTASSIUM ION, STRONTIUM ION
Authors:Pan, B, Shi, K, Sundaralingam, M.
Deposit date:2006-04-24
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of an RNA quadruplex containing inosine tetrad: implications for the roles of NH2 group in purine tetrads.
J.Mol.Biol., 363, 2006
1P79
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Crystal structure of a bulged RNA tetraplex: implications for a novel binding site in RNA tetraplex
Descriptor: 5'-R(*UP*GP*UP*GP*GP*U)-3', POTASSIUM ION
Authors:Pan, B, Xiong, Y, Shi, K, Sundaralingam, M.
Deposit date:2003-04-30
Release date:2003-11-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal Structure of a Bulged RNA Tetraplex at 1.1 A Resolution: Implications for a Novel Binding Site in RNA Tetraplex
STRUCTURE, 11, 2003
1MDG
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An Alternating Antiparallel Octaplex in an RNA Crystal Structure
Descriptor: 5'-R(*UP*(BGM)GP*AP*GP*GP*U)-3', COBALT HEXAMMINE(III), SODIUM ION
Authors:Pan, B.C, Xiong, Y, Shi, K, Sundaralingam, M.
Deposit date:2002-08-07
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:An Eight-Stranded Helical Fragment in RNA Crystal Structure: Implications for Tetraplex Interaction
Structure, 11, 2003
2AWE
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BU of 2awe by Molmil
Base-Tetrad Swapping Results in Dimerization of RNA Quadruplexes: Implications for Formation of I-Motif RNA Octaplex
Descriptor: 5'-R(*UP*(BGM)P*GP*UP*GP*U)-3', POTASSIUM ION, STRONTIUM ION
Authors:Pan, B, Shi, K, Sundaralingam, M.
Deposit date:2005-08-31
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Base-tetrad swapping results in dimerization of RNA quadruplexes: implications for formation of the i-motif RNA octaplex.
Proc.Natl.Acad.Sci.Usa, 103, 2006
331D
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BU of 331d by Molmil
CRYSTAL STRUCTURE OF D(GCGCGCG) WITH 5'-OVERHANG G'S
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*GP*CP*GP*CP*G)-3')
Authors:Pan, B, Ban, C, Wahl, M, Sundaralingam, M.
Deposit date:1997-05-13
Release date:1997-09-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of d(GCGCGCG) with 5'-overhang G residues.
Biophys.J., 73, 1997
1M6R
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BU of 1m6r by Molmil
Crystal structure of rGd(CGCGCG) forming hexamer Z-DNA duplex with 5'-(rG) overhang
Descriptor: 5'-R(*G)D(*CP*GP*CP*GP*CP*G)-3'
Authors:Pan, B, Sundaralingam, M.
Deposit date:2002-07-17
Release date:2003-02-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of rGd(CGCGCG): a Z-DNA hexamer duplex with a 5'-(rG) overhang.
Acta Crystallogr.,Sect.D, 59, 2003
1KAT
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BU of 1kat by Molmil
Solution Structure of a Phage-Derived Peptide Antagonist in Complex with Vascular Endothelial Growth Factor
Descriptor: Phage-Derived Peptide Antagonist, Vascular Endothelial Growth Factor
Authors:Pan, B, Li, B, Russell, S.J, Tom, J.Y.K, Cochran, A.G, Fairbrother, W.J.
Deposit date:2001-11-02
Release date:2002-11-02
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution Structure of a Phage-derived Peptide Antagonist in Complex with Vascular Endothelial Growth Factor
J.Mol.Biol., 316, 2002
420D
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BU of 420d by Molmil
CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES
Descriptor: RNA (5'-R(*GP*CP*AP*GP*AP*GP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'), SODIUM ION
Authors:Pan, B, Mitra, S.N, Sundaralingam, M.
Deposit date:1998-08-13
Release date:1999-01-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an RNA 16-mer duplex R(GCAGAGUUAAAUCUGC)2 with nonadjacent G(syn).A+(anti) mispairs.
Biochemistry, 38, 1999
409D
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BU of 409d by Molmil
CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES
Descriptor: RNA (5'-R(*CP*CP*CP*IP*UP*GP*GP*G)-3')
Authors:Pan, B, Mitra, S.N, Sun, L, Hart, D, Sundaralingam, M.
Deposit date:1998-06-26
Release date:1999-01-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an RNA octamer duplex r(CCCIUGGG)2 incorporating tandem I.U wobbles.
Nucleic Acids Res., 26, 1998
405D
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BU of 405d by Molmil
STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHES
Descriptor: RNA (5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3')
Authors:Pan, B, Sundaralingam, M, Mitra, S.N.
Deposit date:1998-06-17
Release date:1999-01-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a 16-mer RNA duplex r(GCAGACUUAAAUCUGC)2 with wobble C.A+ mismatches.
J.Mol.Biol., 283, 1998
31BI
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BU of 31bi by Molmil
INTERLEUKIN-1 BETA (IL-1 BETA) (MUTANT WITH CYS 71 REPLACED BY SER) (C71S)
Descriptor: INTERLEUKIN-1 BETA PRECURSOR
Authors:Veerapandian, B, Poulos, T.L, Gilliland, G.L, Masui, Y, Hirai, Y.
Deposit date:1991-03-21
Release date:1992-04-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:

41BI
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BU of 41bi by Molmil
INTERLEUKIN-1 BETA (IL-1 BETA) (MUTANT WITH CYS 8 REPLACED BY ALA (C8A)
Descriptor: INTERLEUKIN-1 BETA
Authors:Veerapandian, B, Poulos, T.L, Gilliland, G.L, Masui, Y, Hirai, Y.
Deposit date:1992-02-03
Release date:1992-04-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:

21BI
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BU of 21bi by Molmil
INTERLEUKIN-1 BETA (IL-1 BETA) (MUTANT WITH CYS 71 REPLACED BY ALA) (C71A)
Descriptor: INTERLEUKIN-1 BETA
Authors:Veerapandian, B, Poulos, T.L, Gilliland, G.L, Masui, Y, Hirai, Y.
Deposit date:1991-03-21
Release date:1992-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:

8JHQ
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Cryo-EM structure of human S1P transporter SPNS2 bound with S1P
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, Sphingosine-1-phosphate transporter SPNS2,GlgA glycogen synthase
Authors:Pang, B, Yu, L.Y, Ren, R.B.
Deposit date:2023-05-25
Release date:2024-01-10
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular basis of Spns2-facilitated sphingosine-1-phosphate transport.
Cell Res., 34, 2024
8JHR
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BU of 8jhr by Molmil
Cryo-EM structure of human S1P transporter SPNS2 bound with an inhibitor 16d
Descriptor: 3-[3-(4-decylphenyl)-1,2,4-oxadiazol-5-yl]propan-1-amine, Sphingosine-1-phosphate transporter SPNS2
Authors:Pang, B, Yu, L.Y, Ren, R.B.
Deposit date:2023-05-25
Release date:2024-01-10
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Molecular basis of Spns2-facilitated sphingosine-1-phosphate transport.
Cell Res., 34, 2024
5B7B
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BU of 5b7b by Molmil
Crystal structure of Nucleoprotein-nucleozin complex
Descriptor: Nucleoprotein, [4-(2-chloro-4-nitrophenyl)piperazin-1-yl](5-methyl-3-phenyl-1,2-oxazol-4-yl)methanone
Authors:Pang, B, Zhang, W.Z, Zhang, H.M, Hao, Q.
Deposit date:2016-06-06
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Characterization of H1N1 Nucleoprotein-Nucleozin Binding Sites
Sci Rep, 6, 2016
4I1B
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BU of 4i1b by Molmil
FUNCTIONAL IMPLICATIONS OF INTERLEUKIN-1BETA BASED ON THE THREE-DIMENSIONAL STRUCTURE
Descriptor: INTERLEUKIN-1 BETA
Authors:Veerapandian, B, Poulos, T.L, Gilliland, G.L, Raag, R, Svensson, L.A, Masui, Y, Hirai, Y.
Deposit date:1990-03-27
Release date:1990-04-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional implications of interleukin-1 beta based on the three-dimensional structure.
Proteins, 12, 1992

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