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PDB: 161 results

6G8H
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BU of 6g8h by Molmil
Flavonoid-responsive Regulator FrrA in complex with (R,S)-Naringenin
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, NARINGENIN, R-naringenin, ...
Authors:Werner, N, Hoppen, J, Palm, G, Werten, S, Goettfert, M, Hinrichs, W.
Deposit date:2018-04-08
Release date:2019-04-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The induction mechanism of the flavonoid-responsive regulator FrrA.
Febs J., 2021
6RGX
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BU of 6rgx by Molmil
TETR(D) N82A MUTANT IN COMPLEX WITH DOXYCYCLINE AND MAGNESIUM
Descriptor: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
Deposit date:2019-04-17
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
6RCR
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BU of 6rcr by Molmil
TETR(D) H100A MUTANT IN COMPLEX WITH DOXYCYCLINE AND MAGNESIUM
Descriptor: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
Deposit date:2019-04-11
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
6G87
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BU of 6g87 by Molmil
Flavonoid-responsive Regulator FrrA
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, TetR/AcrR family transcriptional regulator
Authors:Werner, N, Hoppen, J, Palm, G, Werten, S, Goettfert, M, Hinrichs, W.
Deposit date:2018-04-07
Release date:2019-04-24
Last modified:2021-08-18
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:The induction mechanism of the flavonoid-responsive regulator FrrA.
Febs J., 2021
6RBM
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BU of 6rbm by Molmil
TETR(D) E147A MUTANT IN COMPLEX WITH MINOCYCLINE AND MAGNESIUM
Descriptor: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
Deposit date:2019-04-11
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
6RBL
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BU of 6rbl by Molmil
TETR(D) E147A MUTANT IN COMPLEX WITH DOXYCYCLINE AND MAGNESIUM
Descriptor: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
Deposit date:2019-04-10
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
7O4E
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BU of 7o4e by Molmil
The DYW domain of A. thaliana OTP86 in its inactive state
Descriptor: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic, ZINC ION
Authors:Weber, G, Palm, G.J, Takenaka, M, Barthel, T, Feiler, C, Weiss, M.S.
Deposit date:2021-04-06
Release date:2021-06-30
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DYW domain structures imply an unusual regulation principle in plant organellar RNA editing catalysis.
Nat Catal, 4, 2021
7QE9
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BU of 7qe9 by Molmil
Human cationic trypsin (TRY1) complexed with serine protease inhibitor Kazal type 1 N34S (SPINK1 N34S)
Descriptor: SULFATE ION, Serine protease inhibitor Kazal-type 1, Trypsin-1
Authors:Nagel, F, Palm, G.J, Delcea, M, Lammers, M.
Deposit date:2021-12-01
Release date:2022-03-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Biophysical Insights into SPINK1 Bound to Human Cationic Trypsin.
Int J Mol Sci, 23, 2022
7QE8
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BU of 7qe8 by Molmil
Human cationic trypsin (TRY1) complexed with serine protease inhibitor Kazal type 1 (SPINK1)
Descriptor: SULFATE ION, Serine protease inhibitor Kazal-type 1, Trypsin-1
Authors:Nagel, F, Palm, G.J, Delcea, M, Lammers, M.
Deposit date:2021-12-01
Release date:2022-03-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Biophysical Insights into SPINK1 Bound to Human Cationic Trypsin.
Int J Mol Sci, 23, 2022
5MRU
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BU of 5mru by Molmil
TetR(class A) in complex with 5a,6-anhydrotetracycline and magnesium
Descriptor: 5A,6-ANHYDROTETRACYCLINE, MAGNESIUM ION, Tetracycline Repressor, ...
Authors:Hinrichs, W, Palm, G.J.
Deposit date:2016-12-26
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:TetR(class A) in complex with 5a,6-anhydrotetracycline and magnesium
To Be Published
6DQX
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BU of 6dqx by Molmil
Actinobacillus ureae class Id ribonucleotide reductase alpha subunit
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:McBride, M.J, Palowitch, G.M, Boal, A.K.
Deposit date:2018-06-11
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structures of Class Id Ribonucleotide Reductase Catalytic Subunits Reveal a Minimal Architecture for Deoxynucleotide Biosynthesis.
Biochemistry, 58, 2019
1WSA
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BU of 1wsa by Molmil
STRUCTURE OF L-ASPARAGINASE II PRECURSOR
Descriptor: ASPARAGINE AMIDOHYDROLASE
Authors:Lubkowski, J, Palm, G.J, Gilliland, G.L, Derst, C, Rohm, K.-H, Wlodawer, A.
Deposit date:1996-08-15
Release date:1997-04-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and amino acid sequence of Wolinella succinogenes L-asparaginase.
Eur.J.Biochem., 241, 1996
1B44
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BU of 1b44 by Molmil
CRYSTAL STRUCTURE OF THE B SUBUNIT OF HEAT-LABILE ENTEROTOXIN FROM E. COLI CARRYING A PEPTIDE WITH ANTI-HSV ACTIVITY
Descriptor: PROTEIN (B-POL SUBUNIT OF HEAT-LABILE ENTEROTOXIN)
Authors:Matkovic-Calogovic, D, Loregian, A, D'Acunto, M.R, Battistutta, R, Tossi, A, Palu, G, Zanotti, G.
Deposit date:1999-01-04
Release date:1999-01-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the B subunit of Escherichia coli heat-labile enterotoxin carrying peptides with anti-herpes simplex virus type 1 activity.
J.Biol.Chem., 274, 1999
6FTS
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BU of 6fts by Molmil
TETR(D) N82A MUTANT IN COMPLEX WITH PEG4
Descriptor: CHLORIDE ION, TETRAETHYLENE GLYCOL, Tetracycline repressor protein class D
Authors:Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
Deposit date:2018-02-23
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4P1G
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BU of 4p1g by Molmil
Crystal structure of the Bateman domain of murine magnesium transporter CNNM2 bound to AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Metal transporter CNNM2
Authors:Corral-Rodriguez, M.A, Stuiver, M, Abascal-Palacios, G, Diercks, T, Oyenarte, I, Ereno-Orbea, J, Encinar, J.A, Spiwok, V, Terashima, H, Accardi, A, Muller, D, Martinez-Cruz, L.A.
Deposit date:2014-02-26
Release date:2015-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
To Be Published
4P1O
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BU of 4p1o by Molmil
Crystal structure of the Bateman domain of murine magnesium transporter CNNM2 bound to ATP-Mg
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Metal transporter CNNM2
Authors:Corral-Rodriguez, M.A, Stuiver, M, Abascal-Palacios, G, Diercks, T, Oyenarte, I, Ereno-Orbea, J, Encinar, J.A, Spiwok, V, Terashima, H, Accardi, A, Muller, D, Martinez-Cruz, L.A.
Deposit date:2014-02-27
Release date:2015-04-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
To Be Published
2X3A
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BU of 2x3a by Molmil
AsaP1 inactive mutant E294Q, an extracellular toxic zinc metalloendopeptidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Bogdanovic, X, Palm, G.J, Singh, R.K, Hinrichs, W.
Deposit date:2010-01-22
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Evidence of Intramolecular Propeptide Inhibition of the Aspzincin Metalloendopeptidase Asap1.
FEBS Lett., 590, 2016
4A99
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BU of 4a99 by Molmil
STRUCTURE OF THE TETRACYCLINE DEGRADING MONOOXYGENASE TETX IN COMPLEX WITH MINOCYCLINE
Descriptor: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Volkers, G, Palm, G.J, Weiss, M.S, Hinrichs, W.
Deposit date:2011-11-25
Release date:2012-12-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Putative Dioxygen-Binding Sites and Recognition of Tigecycline and Minocycline in the Tetracycline-Degrading Monooxygenase Tetx
Acta Crystallogr.,Sect.D, 69, 2013
1GVL
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BU of 1gvl by Molmil
Human prokallikrein 6 (hK6)/ prozyme/ proprotease M/ proneurosin
Descriptor: KALLIKREIN 6
Authors:Gomis-Ruth, F.X, Bayes, A, Sotiropoulou, G, Pampalakis, G, Tsetsenis, T, Villegas, V, Aviles, F.X, Coll, M.
Deposit date:2002-02-14
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Structure of Human Prokallikrein 6 Reveals a Novel Activation Mechanism for the Kallikrein Family.
J.Biol.Chem., 277, 2002
2X3C
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BU of 2x3c by Molmil
AsaP1 inactive mutant E294Q, an extracellular toxic zinc metalloendopeptidase
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Bogdanovic, X, Palm, G.J, Singh, R.K, Hinrichs, W.
Deposit date:2010-01-22
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural Evidence of Intramolecular Propeptide Inhibition of the Aspzincin Metalloendopeptidase Asap1.
FEBS Lett., 590, 2016
8RPK
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BU of 8rpk by Molmil
AMP-forming Acetyl-CoA synthetase from Chloroflexota bacterium without bound ligand
Descriptor: Acetate--CoA ligase, MAGNESIUM ION, POTASSIUM ION
Authors:Striska, K, Palm, G.J, Lammers, M.
Deposit date:2024-01-16
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.615 Å)
Cite:The AMP-forming acetyl-CoA-synthetase is regulated by lysine acetylation and has an intrinsic phosphotransacetylase activity to adjust its activity to the cellular acetyl-phosphate level
Nature Structural Biology, 2024
4A6N
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BU of 4a6n by Molmil
STRUCTURE OF THE TETRACYCLINE DEGRADING MONOOXYGENASE TETX IN COMPLEX WITH TIGECYCLINE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, TETX2 PROTEIN, ...
Authors:Volkers, G, Palm, G.J, Weiss, M.S, Hinrichs, W.
Deposit date:2011-11-07
Release date:2012-11-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Putative Dioxygen-Binding Sites and Recognition of Tigecycline and Minocycline in the Tetracycline-Degrading Monooxygenase Tetx
Acta Crystallogr.,Sect.D, 69, 2013
2XPV
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BU of 2xpv by Molmil
TetR(D) in complex with minocycline and magnesium.
Descriptor: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Dalm, D, Proft, J, Palm, G.J, Hinrichs, W.
Deposit date:2010-08-30
Release date:2011-09-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Tetr(D) in Complex with Minocycline.
To be Published
2XPW
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BU of 2xpw by Molmil
TetR(D) in complex with oxytetracycline and magnesium.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Dalm, D, Proft, J, Palm, G.J, Hinrichs, W.
Deposit date:2010-08-30
Release date:2011-09-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Tetr(D) in Complex with Oxytetracycline.
To be Published
1HA3
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BU of 1ha3 by Molmil
ELONGATION FACTOR TU IN COMPLEX WITH aurodox
Descriptor: BETA-MERCAPTOETHANOL, ELONGATION FACTOR TU, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Vogeley, L, Palm, G.J, Mesters, J.R, Hilgenfeld, R.
Deposit date:2001-03-26
Release date:2001-05-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Change of Elongation Factor TU Induced by Antibiotic Binding: Crystal Structure of the Complex between EF-TU:Gdp and Aurodox
J.Biol.Chem., 276, 2001

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