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PDB: 126 results

3GUZ
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Structural and substrate-binding studies of pantothenate synthenate (PS)provide insights into homotropic inhibition by pantoate in PS's
Descriptor: PANTOATE, Pantothenate synthetase
Authors:Chakrabarti, K.S, Thakur, K.G, Gopal, B, Sarma, S.P.
Deposit date:2009-03-30
Release date:2010-02-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:X-ray crystallographic and NMR studies of pantothenate synthetase provide insights into the mechanism of homotropic inhibition by pantoate
Febs J., 277, 2010
3Q89
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Crystal structure of Staphylococcus aureus nucleoside diphosphate kinase complexed with CDP
Descriptor: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Srivastava, S.K, Rajasree, K, Gopal, B.
Deposit date:2011-01-06
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conformational basis for substrate recognition and regulation of catalytic activity in Staphylococcus aureus nucleoside di-phosphate kinase.
Biochim.Biophys.Acta, 2011
3Q8U
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Crystal structure of Staphylococcus aureus nucleoside diphosphate kinase complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Srivastava, S.K, Rajasree, K, Gopal, B.
Deposit date:2011-01-07
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Conformational basis for substrate recognition and regulation of catalytic activity in Staphylococcus aureus nucleoside di-phosphate kinase.
Biochim.Biophys.Acta, 1814, 2011
3U49
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Crystal structure of YwfH, NADPH dependent reductase involved in Bacilysin biosynthesis
Descriptor: Bacilysin biosynthesis oxidoreductase ywfH
Authors:Rajavel, M, Gopal, B.
Deposit date:2011-10-07
Release date:2013-03-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural insights into the role of Bacillus subtilis YwfH (BacG) in tetrahydrotyrosine synthesis
Acta Crystallogr.,Sect.D, 69, 2013
3U4D
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Crystal structure of YwfH, NADPH dependent reductase involved in Bacilysin biosynthesis
Descriptor: Bacilysin biosynthesis oxidoreductase ywfH
Authors:Rajavel, M, Gopal, B.
Deposit date:2011-10-07
Release date:2013-03-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the role of Bacillus subtilis YwfH (BacG) in tetrahydrotyrosine synthesis
Acta Crystallogr.,Sect.D, 69, 2013
3VEP
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BU of 3vep by Molmil
Crystal structure of SigD4 in complex with its negative regulator RsdA
Descriptor: Probable RNA polymerase sigma-D factor, SULFATE ION, Uncharacterized protein Rv3413c/MT3522
Authors:Jaiswal, R.K, Gopal, B.
Deposit date:2012-01-09
Release date:2013-02-13
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of sigma-factor activity by proteolysis
Nucleic Acids Res., 41, 2013
3U4C
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BU of 3u4c by Molmil
Crystal structure of YwfH, NADPH dependent reductase involved in Bacilysin biosynthesis
Descriptor: Bacilysin biosynthesis oxidoreductase ywfH, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Rajavel, M, Gopal, B.
Deposit date:2011-10-07
Release date:2013-03-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural insights into the role of Bacillus subtilis YwfH (BacG) in tetrahydrotyrosine synthesis
Acta Crystallogr.,Sect.D, 69, 2013
3I7T
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Crystal structure of Rv2704, a member of highly conserved YjgF/YER057c/UK114 family, from Mycobacterium tuberculosis
Descriptor: IODIDE ION, Putative uncharacterized protein
Authors:Thakur, K.G, Gopal, B.
Deposit date:2009-07-09
Release date:2010-02-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Mycobacterium tuberculosis Rv2704 is a member of the YjgF/YER057c/UK114 family.
Proteins, 78, 2009
3S3H
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BU of 3s3h by Molmil
Crystal structure of the catalytic domain of PTP10D from Drosophila melanogaster with a phosphopeptide substrate GP4
Descriptor: 1,4-BUTANEDIOL, 1-BUTANOL, Tyrosine-protein phosphatase 10D, ...
Authors:Madan, L.L, Gopal, B.
Deposit date:2011-05-18
Release date:2011-11-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational basis for substrate recruitment in protein tyrosine phosphatase 10D
Biochemistry, 50, 2011
4DCI
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BU of 4dci by Molmil
Crystal structure of unknown funciton protein from Synechococcus sp. WH 8102
Descriptor: SULFATE ION, uncharacterized protein
Authors:Chang, C, Marshall, N, Bearden, J, Palenik, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-01-17
Release date:2012-02-01
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Crystal structure of unknown function protein from Synechococcus sp. WH 8102
To be Published
6K6S
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BU of 6k6s by Molmil
Structure of RNase J1 from Staphylococcus epidermidis
Descriptor: MANGANESE (II) ION, Ribonuclease J 1
Authors:Raj, R, Gopal, B.
Deposit date:2019-06-04
Release date:2020-10-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.993 Å)
Cite:Structure of RNase J1 from Staphylococcus epidermidis
J.Biol.Chem., 2020
5YJJ
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Crystal structure of PNPase from Staphylococcus epidermidis
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Polyribonucleotide nucleotidyltransferase
Authors:Raj, R, Gopal, B.
Deposit date:2017-10-10
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization of Staphylococcus epidermidis Polynucleotide phosphorylase and its interactions with ribonucleases RNase J1 and RNase J2.
Biochem. Biophys. Res. Commun., 495, 2018
6K6W
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Structure of RNase J2 from Staphylococcus epidermidis
Descriptor: MANGANESE (II) ION, Ribonuclease J 2
Authors:Raj, R, Gopal, B.
Deposit date:2019-06-05
Release date:2020-10-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of RNase J1 from Staphylococcus epidermidis
J.Biol.Chem., 2020
8I67
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BU of 8i67 by Molmil
Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 2,4-Thiazolidinedione, Form I
Descriptor: 1,2-ETHANEDIOL, 1,3-thiazolidine-2,4-dione, Uracil-DNA glycosylase
Authors:Raj, P, Paul, A, Gopal, B.
Deposit date:2023-01-27
Release date:2023-07-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment.
Eur.J.Med.Chem., 258, 2023
7ESS
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BU of 7ess by Molmil
Structure-guided studies of the Holliday junction resolvase RuvX provide novel insights into ATP-stimulated cleavage of branched DNA and RNA substrates
Descriptor: Putative pre-16S rRNA nuclease
Authors:Thakur, M, Mohan, D, Singh, A.K, Agarwal, A, Gopal, B, Muniyappa, K.
Deposit date:2021-05-11
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Novel insights into ATP-Stimulated Cleavage of branched DNA and RNA Substrates through Structure-Guided Studies of the Holliday Junction Resolvase RuvX.
J.Mol.Biol., 433, 2021
7W22
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BU of 7w22 by Molmil
Structure of the M. tuberculosis HtrA K436A mutant
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-21
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W23
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BU of 7w23 by Molmil
Structure of the M. tuberculosis HtrA S363A mutant
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-21
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W24
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BU of 7w24 by Molmil
Structure of the M. tuberculosis HtrA N383A mutant
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-21
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W25
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BU of 7w25 by Molmil
Structure of the M. tuberculosis HtrA S413A mutant
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-21
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W21
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BU of 7w21 by Molmil
Structure of the M. tuberculosis HtrA N269A mutant
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-21
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W4R
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BU of 7w4r by Molmil
Structure of the M. tuberculosis HtrA N269A mutant at room-temperature
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-29
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W4W
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BU of 7w4w by Molmil
Structure of the M. tuberculosis HtrA K436A mutant at room-temperature
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-29
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W4T
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BU of 7w4t by Molmil
Structure of the M. tuberculosis HtrA S367A mutant at room-temperature
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-29
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W4S
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BU of 7w4s by Molmil
Structure of the M. tuberculosis HtrA S363A mutant at room-temperature
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-29
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023
7W4U
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Structure of the M. tuberculosis HtrA S407A mutant at room-temperature
Descriptor: Probable serine protease HtrA1
Authors:Gupta, A.K, Gopal, B.
Deposit date:2021-11-29
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations.
Acs Chem.Biol., 18, 2023

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数据于2024-07-24公开中

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